Basic Information

Insect: Ctenicera cuprea
Gene Symbol: ZNF236
Assembly: GCA_958336395.1
Location: OY284491.1:24602198-24612344[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0014 0.16 14.1 0.8 1 23 174 196 174 196 0.98

2 13 0.0002 0.022 16.8 0.2 1 23 202 224 202 224 0.98

3 13 4.2e-05 0.0047 18.9 0.1 3 23 231 251 230 251 0.97

4 13 0.0041 0.45 12.7 0.1 1 23 257 279 257 279 0.98

5 13 0.24 27 7.1 2.5 2 23 294 315 293 315 0.94

6 13 1.8e-06 0.0002 23.3 4.3 1 23 340 362 340 362 0.99

7 13 1.7e-05 0.0019 20.2 0.8 1 23 368 390 368 390 0.97

8 13 0.00079 0.088 14.9 4.1 1 23 396 419 396 419 0.96

9 13 0.0011 0.13 14.4 3.8 1 23 429 452 429 452 0.96

10 13 2e-07 2.2e-05 26.3 0.5 1 23 536 558 536 558 0.98

11 13 8.3e-06 0.00093 21.1 2.5 1 23 564 586 564 586 0.99

12 13 1.6e-05 0.0017 20.3 1.1 1 23 592 614 592 614 0.99

13 13 0.017 1.8 10.8 1.0 1 23 621 643 621 643 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0014	0.16	14.1	0.8	1	23	174	196	174	196	0.98
2	13	0.0002	0.022	16.8	0.2	1	23	202	224	202	224	0.98
3	13	4.2e-05	0.0047	18.9	0.1	3	23	231	251	230	251	0.97
4	13	0.0041	0.45	12.7	0.1	1	23	257	279	257	279	0.98
5	13	0.24	27	7.1	2.5	2	23	294	315	293	315	0.94
6	13	1.8e-06	0.0002	23.3	4.3	1	23	340	362	340	362	0.99
7	13	1.7e-05	0.0019	20.2	0.8	1	23	368	390	368	390	0.97
8	13	0.00079	0.088	14.9	4.1	1	23	396	419	396	419	0.96
9	13	0.0011	0.13	14.4	3.8	1	23	429	452	429	452	0.96
10	13	2e-07	2.2e-05	26.3	0.5	1	23	536	558	536	558	0.98
11	13	8.3e-06	0.00093	21.1	2.5	1	23	564	586	564	586	0.99
12	13	1.6e-05	0.0017	20.3	1.1	1	23	592	614	592	614	0.99
13	13	0.017	1.8	10.8	1.0	1	23	621	643	621	643	0.97

Sequence Information

Coding Sequence: atgaAGGCAACACTACAACCTCAGACAAGCGGCCAGAATGAAGTTTATACTTACGTTGTACTTCCTATCGAAGCACTTCAACAAACTTCTGATCAAGGGGTGCAGTCCCTAACAGTAGCACAGAATGTTATACTTAAAGCGCTTCCTGATGGAAACATTTCTCAGCAAGTACAACCTATTACTGTACCAGAGAATGTTATTTTTAGGACATTATCCAAAGGCGCTAAGAAAAGTATTGCACAGCAAATCTCAAACAATGTCACTGCTTTGGTAGCAAAACCCGTGGATAGAGAAAAGCAAAGTCCCCATCCAAGTTCTCAAAGGCTATCAGTAATTGAAGAAAATAATAGTAGTCGGTTAGgCAGCAGTATTGTAAGAAAATCAGTAATTTTGAAATCGGGAGTAAATAAATCAGAAAGCATTGTCGCCGGTAAATTGGGAGTACGTTATTTAAAATGTAGATCTTCTCAGATTAGTAATGTGAGACAAGCAAGAACTAAGGAATCACAAACTGGTTCATTTGAATGTCACATTTGTGGCGAAGTGCTTAATAAAATGATGCTTTATCGAACACACATGCAAGTACATAGAagtactaaaaaatataaatgcgaGCAGTGTTCGGCGAGTTACAATGTGgaagataatttaaaacttcatatGGCAATGCATACTAAAAGTGAACCAATGTGTCCAATTTGTAATAGAAAATTTCAAAGGTTGGCCAGTTTAAAGGCTCACATTATAATACATGAAGTTGACGAAATATTTGTGTGTGTGGAATGCCTCGCCGAGTATGAAAGAGAGGATGATCTCAATAAGCACATGGAGAGTCATAAAAAGGAAAAGATCGACAATAGTTCTGAAAATTTACCATTAGAATGTTCATTCTGTAGTCATACGTTTCAAGATGCCAATAAGTACAAAGAACACATTTCCTTTCATATTAAGaTTAAACGATTAGTGATGAATAGTAAAAAACACAAACGACGTGTAAATACTAATAAAGATTATCCTTATAAATgtgaaatatgtaaaaagtCATTTTCCAAGTATTGTTTGTTGGAAAGGCACATGAGAATACATAGCGGTGAAAAACCTTTCGCTTGCCATTTATGTGATCGAGCTTTTAATCAAAAAGGAACCCTACAAATACACCTTGCTCGACATTCTGGAATTAAACCTTTCCATTGTACTCTTTGCCCAGCTAAATTTTGCCAGAAAGgcAATCTACGAGTTCATGTACAAAAAACACATATAGCTGCAGGCCCTGGtgaaaaaatacacaaatgtACAATGTGTACTTGTATTTTTAAGAGGGTTTCTTCTTTAAATGCTCACATTACACGAGCACATGCAGAAGACAAGCAAGATAATGATATAgcacttttattaaaacaactaaagCAATTAGAAAAAGGATTAGAAACAAATAATGAAGAACAAAATACAGAATCTAGTACCGTATCTTTGGTTGAACCAAAAGAAAATGTACTAGACACTGAAAATAAGGCAGTTAGATATGTAAGGCTAGTAGATACCAGCGTTGAAGGATCTGTTCGACGATTTCTAGTTAAACAGAGAAAAGCAGGTGATTATCAGTGGTACATTTGTTCATATTGTTCAAAGGAATTTAAGAAACCTTCGGATTTAATCAGGCATATTAGAGTACACACAAGAGAAAAGCCATATAAGtgTAAATACTGTGATcaggatttttctttaaaatctacATTAACGACTCATATTACTACACACATTGGAAAACGTCAATACCAGTGTGTcctttgtttaaaatcatttacatCTCTTCGATCATTGAACGCACATCTTAGgAGACATGAAAAGCGGTCACAACACTATATGTGTAGTACCTGTAATACAATATTCAGTACAATGACAAAAGCAAAAATGCACATGGAATTGCATAAAGCGGATAAAGCTGGCGAATTACGAGTAGTAATGCAGCAACCTATGGTGGAAACCCCtaatggtaaaaaaatatttaatattaccaCAGTTTCACTATTTTAG
Protein Sequence: MKATLQPQTSGQNEVYTYVVLPIEALQQTSDQGVQSLTVAQNVILKALPDGNISQQVQPITVPENVIFRTLSKGAKKSIAQQISNNVTALVAKPVDREKQSPHPSSQRLSVIEENNSSRLGSSIVRKSVILKSGVNKSESIVAGKLGVRYLKCRSSQISNVRQARTKESQTGSFECHICGEVLNKMMLYRTHMQVHRSTKKYKCEQCSASYNVEDNLKLHMAMHTKSEPMCPICNRKFQRLASLKAHIIIHEVDEIFVCVECLAEYEREDDLNKHMESHKKEKIDNSSENLPLECSFCSHTFQDANKYKEHISFHIKIKRLVMNSKKHKRRVNTNKDYPYKCEICKKSFSKYCLLERHMRIHSGEKPFACHLCDRAFNQKGTLQIHLARHSGIKPFHCTLCPAKFCQKGNLRVHVQKTHIAAGPGEKIHKCTMCTCIFKRVSSLNAHITRAHAEDKQDNDIALLLKQLKQLEKGLETNNEEQNTESSTVSLVEPKENVLDTENKAVRYVRLVDTSVEGSVRRFLVKQRKAGDYQWYICSYCSKEFKKPSDLIRHIRVHTREKPYKCKYCDQDFSLKSTLTTHITTHIGKRQYQCVLCLKSFTSLRSLNAHLRRHEKRSQHYMCSTCNTIFSTMTKAKMHMELHKADKAGELRVVMQQPMVETPNGKKIFNITTVSLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -