Ccup050964.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ctenicera cuprea
Gene Symbol
-
Assembly
GCA_958336395.1
Location
OY284495.1:38621966-38637448[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.0077 0.86 11.8 2.3 1 21 123 143 123 144 0.95
2 28 0.021 2.3 10.5 0.7 1 23 381 404 381 404 0.95
3 28 2.2e-06 0.00025 22.9 1.7 3 23 411 431 410 431 0.98
4 28 0.086 9.6 8.5 2.3 1 23 435 457 435 457 0.98
5 28 0.00051 0.057 15.5 1.3 1 23 566 588 566 588 0.98
6 28 0.017 1.9 10.7 1.0 1 23 668 690 668 690 0.96
7 28 2.6 2.9e+02 3.8 2.4 1 21 841 861 841 864 0.90
8 28 0.011 1.3 11.3 1.9 1 23 869 891 869 891 0.95
9 28 0.13 14 8.0 0.8 1 23 895 917 895 917 0.97
10 28 0.0088 0.98 11.6 1.1 2 23 920 942 919 942 0.92
11 28 0.00022 0.025 16.7 3.8 1 23 946 968 946 968 0.98
12 28 0.00011 0.012 17.7 0.1 3 23 976 997 974 997 0.94
13 28 0.12 13 8.1 1.1 1 13 1002 1014 1002 1018 0.92
14 28 0.01 1.1 11.5 1.0 1 23 1030 1052 1030 1052 0.99
15 28 0.59 66 5.9 2.2 1 23 1232 1254 1232 1254 0.96
16 28 0.25 28 7.1 0.2 1 22 1429 1450 1429 1452 0.88
17 28 0.0007 0.078 15.1 1.0 1 23 1457 1479 1457 1479 0.97
18 28 0.0081 0.9 11.8 0.6 3 23 1485 1505 1483 1505 0.97
19 28 0.0099 1.1 11.5 1.1 2 23 1508 1530 1507 1530 0.92
20 28 0.16 18 7.6 7.7 1 23 1535 1557 1535 1558 0.95
21 28 4e-05 0.0045 19.0 3.1 1 23 1563 1585 1563 1585 0.98
22 28 0.012 1.3 11.3 0.0 3 23 1593 1614 1591 1614 0.94
23 28 0.82 92 5.4 0.2 1 12 1619 1630 1619 1633 0.91
24 28 0.00037 0.041 16.0 0.6 1 23 1647 1669 1647 1669 0.99
25 28 0.082 9.2 8.6 4.5 1 23 1956 1978 1956 1979 0.96
26 28 0.037 4.1 9.7 1.0 1 20 1984 2003 1984 2008 0.88
27 28 0.0048 0.53 12.5 0.2 1 23 2038 2060 2038 2060 0.99
28 28 0.64 71 5.8 4.0 1 23 2066 2088 2066 2088 0.91

Sequence Information

Coding Sequence
ATGCAAGTCTGCTGTCCCCCCGTGCATATGACCAACATCAGCGACACCTATCGGTCAGTGGAGATGTcatgtttaaaacaaaccgtGGCAAAAAGTACCGTATCAGCATCACCACCTCAGCTTAGTTTTGCGAGACAAAAAAGTAACCACAATATTAAGCAGTGTGAAGTACGTCTCGGCCGGGATCCTTTGTTAATACCAAAACAAGAAATTGATCAAAATAAGCTACCTTCATCAATGATTAGTTTAACCGCTACGAGAAAAACGGCAGCGGAAGTTTTTATTACAGCTGCTACTTCGTTATCGACAGATACAGCATCTGCGGAAGTCGATACCAATAACATATTGCCGCATGCAAGGGCAAAATATAAATGTCCAAACTGTTCAGAAAAGTTTTGTTCATACATTGAactaacaaaacacaaaatgcAGGAGAAGTTAAAACCCGAGGGTAGACAAGATGATGatcatgatgatgatgatggcaATTATAGCGAGGGTGATAATTACGACGACCATGATTTTGTGCTTGATACTGTTGACATACTTACCGGTGTGGAACAAGACAGAGAGAACGTTGACAAAATTTTGCAACATAAGTATACGTGCTCTATATGTTACGACACTTGTATCGGCGAATTGGATTATGAGAATCACATGAAGTTTCATTTGGAATTATCTCAAGCCAATGATAAACATAAGAATAGTGCGGAACCGATTGCATTTGATACAAATTCACCTTCATGTGAAAATGTTGCTGCAATAACCGAGTCTTCTCAATCATGTAGTCCACCAAAAGTCACGTTAAGGCTAAAAAATAAATCACATAATTTGAAAGGAAACCTTGTGGTAGAAATAGCCGAAAATTGTATAGCATCGGGTTCTCAACCAACGGATAAAGTTTCAAATCACAGCTTATTGTCAACAGATGAAGTTAGGGCCAAGATAGTTCCAGTTGATGTAGCTTTACCTTCCAATGGAAACACTGCAATTACATCGGTTCCTACAAGACCAGTTGCAAAAAACCGAAAAGCGATAACAGCAGAATTTCGAACAGTACCTATAATTCCTATAGGGCAATGCACTTGTCCTTTGGAGAAGTTGAAATCCACATGTGATTTTTGCTTAAATGGTCCAAAATATATATGTGGTAATTGCAAGGAagaatttaaaacacatttattgTTGGAGACGCACGTCAGAGACATTCATAAATCAGCAACACGCTTTTGTCAAGAATGCGGTCGTGGTTTTAGCAGAAGTTCTTCCTTAAAACAACATATGAATCGTCATAAAGGGCTATTCACTTGTTATCTATGTGTAAGCAGCTTTAAGGAAAAACACGAGTTTGAAGAACACATTTTGACACACAGAATAAAATCGGTTGCTACACCAAGTTTAAAACTAACGGTGGAAAAAACAACCTTAACCACATCACTACCGCAGCTTGGTTTTGCGACACAGAAAAGCAACAACGAGCAACAATGCGAAGCAAGTCTTGCCAAGGATCCTTTGTTGATAACAAAACAAGAAAGTGGTCAAAATAAGCTTACCTCATCAATTTTATATATAAGTCTAACTGCTACCAGAGAGACTGCAGCGCAAGTTTTTATAGAAGCTTCTACTCCGTCATCAACAAAAGCAGCATCCGCAGAAGTCGATGCCAACAACATATTGAAACGTGCAAGGGCAAAATATAAGTGTACAAATTGCTCAGAAAGGTTTTCTTCGTacgttgaattaataaaacataaagaaatgCATAAGAGCGTAAGGAAACCCTATGATAACCGAGATAATGACGGTTGTTTACCTACTATATCGTTAGATGATGATGACGACGACgatgatgtaaattttaatgagGGTGATAATGAGGATGGTGATGAAGATTTTGTGCCTGATGAATGTGATGAAGATTTTGTGCCCGATGAATGTGTTGATATACGTACTGCAGAGGAAGAAAGCAGGAAGAATGTAAACAGAATTGTTCACCATGAATACAGGTGTCCTATATGTGATGACGTTTGTATGGACAAAATGGAGTTTAATCGTCACATGGCGTTTCATCTGGAATTACACAAACGCAACGATAAACCCAAATTAGGTACAAACACATCTTTGTGTAAAAATACTGGTTTAACACCCGAGTGTTCTCAACCATGTGTTGTATCAAATGTCACAGCACTACCAACAAGTAGAGCAAGTAATTCTAATGAAAATCATACGATGGAAGTCGATGAAAGTTCTCCAACACCACAacgaatagaaaaaaattcagattCTAGTATATCGCCAATGGGTAATGACAGGACTGAGGTATTTCAATTTGGCATAGCTTCACCGTCCAATGGAAACACTGATGTTCCTATTCTATACAGTTTACTGTcaacaaataaaacagataaCGTAACAGAAGTAgcagaaactaaaaaaataccTAGAATTCCTACAGGGCAATGCACATGTCCTTTGGAGAACTCGGAATCAAAGTGTGATTTCTGCGTAAATGGTCCAAAGTTTGTATGCGCTAACTGTAAAGAGGAATGTAAAACATACTTATTGTTAAAGAAACACTTTACAGACGCTCATAAATATGCGAAACACTTTTGTCAAGAATGTGGCCGGGGCTACAGCAAagctatttatttaaagcaacaTACGGATCGGCATAAACAACTGTTTGCTTGTTATTTATGTGTAAGCAGTTTTGACACGAAGCAGAAGCTTGTAGAACACATGTTTACACACAAGATCAAATGTGATCAGTGTGACAAGGTATGTGCCAGTAAAAAAGACCTGAGCTTACATAAATTAGAGATCCACAAAGGTGAATACACATGCAAAGAATGTGGAAAGGTGTACAATAGGTTGGTAACGTATCGTAAACATTTACATAGGCACAGGCAACAAATGCAAGTAATTTGTGAAGAATGTGGAAGAGAATTTCGATCGGTGAGAAATCTGAAAGCCCATCAGAAGGCCATCCACCTGAAGAAAAAGTACAAATGCAATGTTTGTAAGAAGGAATTTAGTACCCCTACGGGAAGAAAAGATTGCCAAAACAAACACGCTGGCATTGCAATGTACAAATGTGACATGTGCGAGAAAGCTTATTTTCATGGAGGTAGTCTCCTTATTCATAAAAGAATACACACGGGCGAGAAGCCGTACATTTGTTTCGTGTGCAGCCGACGAACAGTGCAGATGTCAAACTCTAAGCAAATGGTACATGCCAAAACCAGGCCAACATCTCTGCCTCAGTTTAGTACTACGCAACGGAAATATAACTACAACATGCAACAGTGCGAAGTACGTCTTGTCAGGGATCCCTTGCTAATACCAAAACAAGACCAGCCATCCTCATCACATATTACACTAAATGCCATCAGGCAATCAGCAGCAGAAGTGTTTATCGAAGCTATTTCGCCATCAACCGACATAGTACGTCGTGAATTCGATAACAATAACATACAGCCACAAGTATCTGCGACATATGTTGAACGAACAGGACAAAAAGAAATGCATAATTTAAGTAATGAAACTGATGGTATTCAAGATACCAGCAGCgttctatttaataaactgtTTGACGGTGATGGTGATGATGAGCAGTGTGTAGTCGGTGAAAATGCTGGCAAACGTGCTGGAGAGaaagaaaataacaataacGCAAATAGTTTGCAAGAAAAATATAGGTGTCGTATATGTGATGACGTTTGTACTGACAAATTAGAATTTACACAGCATCTCGAATTCCACTTGGAGTTAcatgaatacaaaaataaaaaaactgttaatacGGAAGTTGTTACAGTTGATAAAAGCTTGTCTCCATCTAAAACTAATAATGTTATGACTGACGCTACTCAAGCATTACAAACTGCACAAACAGATGCAACACATAATTCGAATAAAGGCTATGTGACGGAAACAGCTGCGTTTGATAATGATAATTCTTGCGAAAACCGTCAAACATCTAAGCCGTCTGAATCAGTAGAAAACATTTCAACTGCTACTTTATTGCGTAGGGGTCGTAATACTACAACTAACATAGCTCGAGTTGAAATATCTTCATCTTCGGTTtcaacaattgctgctaaaccGCGGTCTAACAAATCAGCAAGAAAAAAGGAAACCCCTGGCTTACCGTCAACAATTGAAAGAGATATCTTAGACGCGTTAAAAACCAATAAACAACTTCCTAAAATTCCCATAAGAAAATGCGAttgccgtttaaaaaaattagaaaccaaGTGTGAGTTCTGTAGAGAGCGTCCAAAATATGTATGTGGAAATTGCAAGAAGGAGTTTACGGCATATTTAAAGTTGAAGGAACACGTAGCAGATGCGCATAAATCGGCAAAATACTTTTGTCAAGAATGCGGCCAGGGTTACAGCCAGACCACTTCTTTAAAACGACATGTAGATCGTCACAACGGACTTATTGCTTGTTCTGTATGTACAAGCAGCTTTAAAACAAAGGAGGAGTTCGAGGAACACAGAACGACACATAGAATAAAATGTGATCAGTGTGACAAGGTATGTGCCAGTAAAAAAGAGCTGAGCTTACATAAATTAGAGGTTCACAAGGGGGTAACTTATACTTGCCGTgattgtaataaaacatttaaaaaatgttctataTTAAATAGTCATAGTCAGCGACATCACCGAACAGGTGAATACACATGCAAAGAATGTGGAAAGGTGTACAATAGGTTGGCAACGTATCGTAGACATATACATAGGCACAACCAACAAATGCAAGTAATTTGTGAAGAATGTGGAAAAGAGTTTGGATCGGTGTTATATCTGAAAGTTCACCAGAAGGCCATCCACTTGAAGAAGAAATATATATGCAATGGTTGCAAAAAGGAGTTTAGTTCCACTATGGCAAGAAATGATTGTCAAAATAAACATGCTGGCATTGCAAAATACAAGTGTGACATGTGTGAGAAAGCCTTTTATTATTACGCTAGCCTCGTTATTCATAAAAGAATACACACGGGTTCTTGCTTTAATGAGTTTCAAAAAGAACTTCTTGAGTACAGCGATGGTTTTGCGCAACACTGTAGCACGTTACTGCGAGACAGGTGCCGCTTGCAGTGCGATTCTAAGACCTGGTCAACATCCCTACCTCATTTTAGTACAATTAGTAAGGGTAACCACAACATTCTGCACTGCGAAGTACGTCTAGTCAGGGATCATTTGCTAATACCAAAACAAGAAATTGATGTAGATCGGCCATCCTCATCAACTATAACTCTGAACGCCATTCGACAAACCGCAGCCGAAGTCTTTATAGAAGCTATTTCGTCGTCAACCAACGTGAGATCTCGCGAAGTTGATACCAATAACACACCAATACAAACAAGTGCAAAATATGTTGAACGAATGGAACACAAAGAAATGCACAACGTAAGAAAGACAACTGATAGTAACCGAGATACCAATAGCATTCTATTTACTGAACCGTTTCATGATGATGGTGGTGTTGGTGGGGGTGACGAGGAGTGTGTAGCCGATGATAATGCTGACATAAGTACTGGAGAGAACGAAAATGACAATGATAATGCAAATAGAAGTTTGCAAGATGATAGAAGCCTgtctttatttaaaagtaatgctGCTATAGCTGCTTTTACCCAAGCATTAGAAATTGCACCTACTACTACCTTGATACAAACAGTTGAAACAAATAATTCAAACAAGGGCGATGTGATGGAAACAGCTGCGTTTGATATACCTTCTTCCTCCGACAGTTGTCTAATATCTGAATTAGTAGAAGAAACTTCAAGTGTCAGTTCTTTACCTTGCGGTGACTTATCTCTACATGAATTAGAGGTTCACAAGGGGGTAACTTATACTTGCCGTGattgtaataaaacattaaaaaaatcttctatattaaaaatacataagcaGCGACATCACCGCATGGGCGAATACAAATGCAAAGAATGTGGAAAGGTTAGCAAGTCGTTGAAATTATACTACGATCATGCATATAGACCTTCTCACAGGCCACGCTCAACTAAAATACCATCTTTTCAAGATTGTAATTATGCAAGAATTAATTGCGAAAACAAACATGCTGGAATTGCAAACTACAAATGTAACATGTGTGAGGAAGCCTATTTTTATGCAGGTAGCCTTCTTATTCATAAAAGAATACACACGGGCGAGAAGCCGTACATTTGTTTTATGTGCAGTCGACGGTTTTACAGTTCTCAAATGTTGCTCAAACATTGCCTAAGCCATGGGATTCCcgaaaaagaaattagaaagaGAATGAAAGTTGCGTACCAACCTGAAAgccaaaaatga
Protein Sequence
MQVCCPPVHMTNISDTYRSVEMSCLKQTVAKSTVSASPPQLSFARQKSNHNIKQCEVRLGRDPLLIPKQEIDQNKLPSSMISLTATRKTAAEVFITAATSLSTDTASAEVDTNNILPHARAKYKCPNCSEKFCSYIELTKHKMQEKLKPEGRQDDDHDDDDGNYSEGDNYDDHDFVLDTVDILTGVEQDRENVDKILQHKYTCSICYDTCIGELDYENHMKFHLELSQANDKHKNSAEPIAFDTNSPSCENVAAITESSQSCSPPKVTLRLKNKSHNLKGNLVVEIAENCIASGSQPTDKVSNHSLLSTDEVRAKIVPVDVALPSNGNTAITSVPTRPVAKNRKAITAEFRTVPIIPIGQCTCPLEKLKSTCDFCLNGPKYICGNCKEEFKTHLLLETHVRDIHKSATRFCQECGRGFSRSSSLKQHMNRHKGLFTCYLCVSSFKEKHEFEEHILTHRIKSVATPSLKLTVEKTTLTTSLPQLGFATQKSNNEQQCEASLAKDPLLITKQESGQNKLTSSILYISLTATRETAAQVFIEASTPSSTKAASAEVDANNILKRARAKYKCTNCSERFSSYVELIKHKEMHKSVRKPYDNRDNDGCLPTISLDDDDDDDDVNFNEGDNEDGDEDFVPDECDEDFVPDECVDIRTAEEESRKNVNRIVHHEYRCPICDDVCMDKMEFNRHMAFHLELHKRNDKPKLGTNTSLCKNTGLTPECSQPCVVSNVTALPTSRASNSNENHTMEVDESSPTPQRIEKNSDSSISPMGNDRTEVFQFGIASPSNGNTDVPILYSLLSTNKTDNVTEVAETKKIPRIPTGQCTCPLENSESKCDFCVNGPKFVCANCKEECKTYLLLKKHFTDAHKYAKHFCQECGRGYSKAIYLKQHTDRHKQLFACYLCVSSFDTKQKLVEHMFTHKIKCDQCDKVCASKKDLSLHKLEIHKGEYTCKECGKVYNRLVTYRKHLHRHRQQMQVICEECGREFRSVRNLKAHQKAIHLKKKYKCNVCKKEFSTPTGRKDCQNKHAGIAMYKCDMCEKAYFHGGSLLIHKRIHTGEKPYICFVCSRRTVQMSNSKQMVHAKTRPTSLPQFSTTQRKYNYNMQQCEVRLVRDPLLIPKQDQPSSSHITLNAIRQSAAEVFIEAISPSTDIVRREFDNNNIQPQVSATYVERTGQKEMHNLSNETDGIQDTSSVLFNKLFDGDGDDEQCVVGENAGKRAGEKENNNNANSLQEKYRCRICDDVCTDKLEFTQHLEFHLELHEYKNKKTVNTEVVTVDKSLSPSKTNNVMTDATQALQTAQTDATHNSNKGYVTETAAFDNDNSCENRQTSKPSESVENISTATLLRRGRNTTTNIARVEISSSSVSTIAAKPRSNKSARKKETPGLPSTIERDILDALKTNKQLPKIPIRKCDCRLKKLETKCEFCRERPKYVCGNCKKEFTAYLKLKEHVADAHKSAKYFCQECGQGYSQTTSLKRHVDRHNGLIACSVCTSSFKTKEEFEEHRTTHRIKCDQCDKVCASKKELSLHKLEVHKGVTYTCRDCNKTFKKCSILNSHSQRHHRTGEYTCKECGKVYNRLATYRRHIHRHNQQMQVICEECGKEFGSVLYLKVHQKAIHLKKKYICNGCKKEFSSTMARNDCQNKHAGIAKYKCDMCEKAFYYYASLVIHKRIHTGSCFNEFQKELLEYSDGFAQHCSTLLRDRCRLQCDSKTWSTSLPHFSTISKGNHNILHCEVRLVRDHLLIPKQEIDVDRPSSSTITLNAIRQTAAEVFIEAISSSTNVRSREVDTNNTPIQTSAKYVERMEHKEMHNVRKTTDSNRDTNSILFTEPFHDDGGVGGGDEECVADDNADISTGENENDNDNANRSLQDDRSLSLFKSNAAIAAFTQALEIAPTTTLIQTVETNNSNKGDVMETAAFDIPSSSDSCLISELVEETSSVSSLPCGDLSLHELEVHKGVTYTCRDCNKTLKKSSILKIHKQRHHRMGEYKCKECGKVSKSLKLYYDHAYRPSHRPRSTKIPSFQDCNYARINCENKHAGIANYKCNMCEEAYFYAGSLLIHKRIHTGEKPYICFMCSRRFYSSQMLLKHCLSHGIPEKEIRKRMKVAYQPESQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-