Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284495.1:916823-923161[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.74 83 5.6 3.3 1 23 56 78 56 78 0.98

2 23 0.00024 0.027 16.6 0.8 1 23 84 106 84 106 0.99

3 23 1.2e-05 0.0013 20.7 2.3 1 23 112 134 112 134 0.99

4 23 9e-05 0.01 17.9 3.7 1 23 140 162 140 162 0.99

5 23 0.00041 0.045 15.8 2.9 1 23 168 190 168 190 0.98

6 23 0.00021 0.023 16.7 3.8 1 23 196 218 196 218 0.97

7 23 0.47 53 6.2 4.4 1 23 355 377 355 377 0.98

8 23 0.00021 0.023 16.7 0.6 1 23 383 405 383 405 0.98

9 23 4.9e-05 0.0054 18.7 2.9 2 23 412 433 411 433 0.97

10 23 6.2e-06 0.00069 21.6 1.7 1 23 439 461 439 461 0.99

11 23 0.012 1.3 11.2 5.7 1 23 467 489 467 489 0.96

12 23 0.00035 0.039 16.0 1.0 1 23 495 517 495 517 0.98

13 23 0.0011 0.12 14.5 2.7 1 23 523 545 523 545 0.98

14 23 2 2.3e+02 4.2 1.4 1 14 551 564 551 568 0.82

15 23 0.9 1e+02 5.3 7.2 1 23 679 701 679 701 0.97

16 23 0.0018 0.2 13.8 1.8 1 23 707 729 707 729 0.99

17 23 0.0011 0.12 14.5 2.9 2 23 736 757 735 757 0.97

18 23 0.00064 0.071 15.2 3.9 1 23 763 785 763 785 0.99

19 23 0.024 2.7 10.3 1.5 1 23 791 813 791 813 0.97

20 23 9.2e-05 0.01 17.9 0.3 1 23 819 841 819 841 0.99

21 23 0.012 1.3 11.2 2.6 1 23 847 869 847 869 0.98

22 23 0.007 0.78 11.9 6.5 1 23 875 897 875 897 0.98

23 23 1.5 1.7e+02 4.6 6.3 1 23 903 925 903 926 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.74	83	5.6	3.3	1	23	56	78	56	78	0.98
2	23	0.00024	0.027	16.6	0.8	1	23	84	106	84	106	0.99
3	23	1.2e-05	0.0013	20.7	2.3	1	23	112	134	112	134	0.99
4	23	9e-05	0.01	17.9	3.7	1	23	140	162	140	162	0.99
5	23	0.00041	0.045	15.8	2.9	1	23	168	190	168	190	0.98
6	23	0.00021	0.023	16.7	3.8	1	23	196	218	196	218	0.97
7	23	0.47	53	6.2	4.4	1	23	355	377	355	377	0.98
8	23	0.00021	0.023	16.7	0.6	1	23	383	405	383	405	0.98
9	23	4.9e-05	0.0054	18.7	2.9	2	23	412	433	411	433	0.97
10	23	6.2e-06	0.00069	21.6	1.7	1	23	439	461	439	461	0.99
11	23	0.012	1.3	11.2	5.7	1	23	467	489	467	489	0.96
12	23	0.00035	0.039	16.0	1.0	1	23	495	517	495	517	0.98
13	23	0.0011	0.12	14.5	2.7	1	23	523	545	523	545	0.98
14	23	2	2.3e+02	4.2	1.4	1	14	551	564	551	568	0.82
15	23	0.9	1e+02	5.3	7.2	1	23	679	701	679	701	0.97
16	23	0.0018	0.2	13.8	1.8	1	23	707	729	707	729	0.99
17	23	0.0011	0.12	14.5	2.9	2	23	736	757	735	757	0.97
18	23	0.00064	0.071	15.2	3.9	1	23	763	785	763	785	0.99
19	23	0.024	2.7	10.3	1.5	1	23	791	813	791	813	0.97
20	23	9.2e-05	0.01	17.9	0.3	1	23	819	841	819	841	0.99
21	23	0.012	1.3	11.2	2.6	1	23	847	869	847	869	0.98
22	23	0.007	0.78	11.9	6.5	1	23	875	897	875	897	0.98
23	23	1.5	1.7e+02	4.6	6.3	1	23	903	925	903	926	0.94

Sequence Information

Coding Sequence: ATGAAGTCGGAGCCGTCTGAACAGTTTGACAATGAAGGGGTAATTCTTTCTGCAACCGCAAGACCTGAGTATGAACACGACATCAAATATTTCACTGACGATTGCAGTGACCAAACAACAGAAAATGaaagtaaaatttctaaatcagaTATCAAAGAAAAACGGTATCGTTGCCAAGAATGCGAATTTCAAACCCATAGCAGGACTAACATTCGATCTCACTTGATACGGCACAAaggagaaaagccattcaaaTGCAATTTGTGCGGGTATGCAGCTATGTTTAAACGCGACCTTCAACGGCACATGAAAATACATAGTAGCGAGAAGCCTTTCCAATGCCAAGAATGTAAGTTCACAACCGCAGATAAATCAAATCTTAATAAGCATATAAAAAAACACGGTGGAGAAGAGCCATTCAAATGTGAAGTGTGTGGATACGCAACTTTCAACAAAACACATTATAAAGATCATATGAGAACACATAGTGGGGAAAAACCTCATACATGTCAgcaatgcaaatttaaaaccgCACGTAAAGCAGCATTAACCGTACATATGAGAACACACactggagagaaaccttttGCCTGTGATTTTTGTGACCATACTTCTGCAAGGAAAGAACATCTCTTAAATCATATGAGAACTCATACTGAAGAGAAACCTTTCGAATGCAAGATAATGGATGGTTTGGAAGAGGATACCAACGGTGCAAATGGTGATTCCTTCAAGCAGTGCCAACAAGTCACAAATAACCTTTTAGAAgttaaagatattaaaattgaagtttCTGACGCTAAGGcaaaactAGAAGTAGACACATATTCATTGCCTCAATCAGAACTTCCAAATCCAGAGGTCAAATTTGAATATATCAATATCAAGTCGGAGCCCTGCGAACAATTCCATAATGAAGAGGAAATTACTGATGCAACCGCTACACCTGATGAAGAACAGGGTATTAAATACTTCATTGACGATTGCAATGACACAACAACAGATGCGTCTagtttagaaaatgaaaataaagctTCCAAATCAGATGTCAAAGAAAAGCGTTATCGTTGCCAAGAATGTGAATTTAAAACTCATAGCAAGTCTAGTATTCGATCCCATAGGATACGACACaaaggagaaaagccatttaaGTGCAATTTGTGTGGATACGCAGCTATGTTCAAAGACTACCTCCAACGGCACATGAATATTCATAGTAGTGAAAAGCCATTACGATGCCACGAATGTGAGTACACAACTGCAGATAAATCCAGTCTACGTAAGCATATAAAAAAGCATGGTGGAGAAGAACCATTCAAATGTGAGGTATGTGGATATGCAACTGTTAACAGCACACATTTTCAAGTACACATGAGAACTCATAATGGGGAAAAACCTCATGCATGTCAcgaatgtaaatttaaaactgcacATAAAACAGCTTTAACTCTACATATGAGAATACACACTGGAGAGAAACCATTTACATGTGATTTGTGCGATTACGCAGCTGCAAGAAAACAACATCTTTTAAGACATGTACGAAGTCACACCGATGAGAAACCTCATCAATGTGAAAAGTGCAACTACAGAACTAGAGAAAAAGAAGTTTTACAAGCccacatgaaaactcacacCGAAGAAAGACCTTTTAAGTGCAATGAATGTGACTATAGATGTGCAGAGAAAAAACGTCTAGAAGAGTACACCAAAGGTATAAAAAGTGATATTTGTCAACAGGGCACCAAAGTTACCAATAACCATTTTGAAATTAAGgatattaaaatagaatataCAGAAGGTGAAGAAGTAAAACCAGAAATCGACACATCTCAATTTGAAGGTGCAAGTCCAGACATcaaatttgaatatataaaCATCATCAAGTCGGAGCCGTCTGAACAGCTTGATAGTGAAGAGAAAAATATTGCTGCTACCATAATAACTCTCAATTACAAGGAGGACCCCCTTGGCGGTTGCAGTGATACGACTACAGAGGCAACCGAAAATGAATCGgatttcaaagaaaaacgtTATCATTGCCACGAATGTGGCTTTAAAACTCATAGCAGATCCAGTATTCAATCTCACCGAATATCTCATAAAggggaaaaattatttaaatgtaatttgtgcAAATACGCAGCTGTGTTCAAAAAATCCCTCAAACGCCACTTGTTAACTCATAGTAGTGAAAAATCACTTCGATGTCAAGAATGCGAGTATACAACTGCAGTTCAATGCAACCTACAGAAACATATGAAAAAACACGGGGGAAACGAATCATTCAAATGCGAACTGTGCAGGTATGCAACTTTTAACAGATCGCATTTTGAAGTGCATATGAGAACTCATAATGGGGAAAAACCTTTTGCATGCCAgcaatgcaaatttaaaactgcACATAAACCAGCCTTAACCATACATACAAGAATACACACAGGAGAGAAACCCTTTACTTGCGAAGTTTGTGACTATACCGCTGCAAGAAAGGAATATCTCTTGAATCATATAAAAACTCACGCCCAAGAGAAACCTTTTGAATGCTACAAGTGTGAATACAAAAGCGTAGATAAGATTCATTTACAAATGCATGTGAAAACACATTTAATAGATATGCCATTTCAGTGCACCGAATGTTCATATAGAAGTACACAGGgtcatcatttaaaaaaacatatgcaAAATCACACAGAAGAAAATCCTCATCATTGCCCAAATTGTTCGTTTAAAACTAAAGCCAAAACTCCGTTAACAATTCATATTAGAAAGCACCActag
Protein Sequence: MKSEPSEQFDNEGVILSATARPEYEHDIKYFTDDCSDQTTENESKISKSDIKEKRYRCQECEFQTHSRTNIRSHLIRHKGEKPFKCNLCGYAAMFKRDLQRHMKIHSSEKPFQCQECKFTTADKSNLNKHIKKHGGEEPFKCEVCGYATFNKTHYKDHMRTHSGEKPHTCQQCKFKTARKAALTVHMRTHTGEKPFACDFCDHTSARKEHLLNHMRTHTEEKPFECKIMDGLEEDTNGANGDSFKQCQQVTNNLLEVKDIKIEVSDAKAKLEVDTYSLPQSELPNPEVKFEYINIKSEPCEQFHNEEEITDATATPDEEQGIKYFIDDCNDTTTDASSLENENKASKSDVKEKRYRCQECEFKTHSKSSIRSHRIRHKGEKPFKCNLCGYAAMFKDYLQRHMNIHSSEKPLRCHECEYTTADKSSLRKHIKKHGGEEPFKCEVCGYATVNSTHFQVHMRTHNGEKPHACHECKFKTAHKTALTLHMRIHTGEKPFTCDLCDYAAARKQHLLRHVRSHTDEKPHQCEKCNYRTREKEVLQAHMKTHTEERPFKCNECDYRCAEKKRLEEYTKGIKSDICQQGTKVTNNHFEIKDIKIEYTEGEEVKPEIDTSQFEGASPDIKFEYINIIKSEPSEQLDSEEKNIAATIITLNYKEDPLGGCSDTTTEATENESDFKEKRYHCHECGFKTHSRSSIQSHRISHKGEKLFKCNLCKYAAVFKKSLKRHLLTHSSEKSLRCQECEYTTAVQCNLQKHMKKHGGNESFKCELCRYATFNRSHFEVHMRTHNGEKPFACQQCKFKTAHKPALTIHTRIHTGEKPFTCEVCDYTAARKEYLLNHIKTHAQEKPFECYKCEYKSVDKIHLQMHVKTHLIDMPFQCTECSYRSTQGHHLKKHMQNHTEENPHHCPNCSFKTKAKTPLTIHIRKHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -