Ccup004917.1
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- -
- Assembly
- GCA_958336395.1
- Location
- OY284486.1:33213940-33215649[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0048 8.7 8.2 0.1 3 45 43 99 43 100 0.87 2 3 0.0029 5.3 8.9 0.0 1 20 174 193 174 197 0.92 3 3 0.0027 5 9.0 0.2 2 45 310 365 309 366 0.85
Sequence Information
- Coding Sequence
- ATGGCGGATGCGGTCGAACAAGATCAACAAAAGAACCCAGAGTTAATCCGTTTGTTACAATCGGGTAGGAAATCTGAATCTGAAATCAGACCAACTTCAAGTGAAAATGCTAATTCGCCGGGCTGGGAATGGACAGTGGACGAAACCAGTTGTTTGCTGAAGCTAATAGGCGAATACGAGTACCTGCCACAAATTAAATCGAAAAATGACCAAGTTTACACCAAACTCTCAAAGTTAATGACAATTAGCGGACACAAAAAAACAAGTGAAGAAATCAAATGCTATTGGAAGGAGCTCAAACAAAAATATGATGGCTATAAAGCGGGAAAATTAGAACACTTTGAATACTATGAACAACTAAATGCtttattattggatttaaattCAAGCTCTCATTCTGAAccagaaataattattataaaaggaGAAGAACTGGAAGGTAGTATTTTACATTCTGATtcttttgataataattttagtagtgacgaatttgaacaaaaaaacgGTAGAGGAGTTAGAAGAAATAATTGGACGTATAAAGAAACCGAATGTGTTGTTCAAGTTTTAGAAAAGTATGGAATGCCATCCCGAACAAATTTACGAAAATTCTGTTATGTTATCGTAGATTACCTCAAACAGCATGGATACTCAAGAAGTGAAGAACAAGCccaagtaaaaattaaacacctGCGAGCGTTGTACAATCAAGTTGTGCGAAAATCTCTCAAAGAAGAagaatttcctttttttaagaaaatagaaGTGCTAATGCAAAACCATGTAGTTCACAAAGTGAAAGAAATAGACGAAACTCAAAATTACATCATGCTCGATGAGCAATCAAAATCTGATGCAGAAGATAACGTTGCAACTGATTTTAGTGAACCCGTTGCTGAGGAGGAGGACACCTGTTACAAGAAGGGTAGGCAAATTTGGACAAACAAAGAGATtcgagttttattaaaatttatagaagaaaaTGGAATTATAACAGGTAAACAATTACGCAAGGTATGTAACAAAGCTGTGGATTACCTGGCATCACACGGTTATTATCGTTCTCCTACCCAAATATTAATTCGTTGGAAAAACACCAAAGCACTATATTGGGCTACCTTcaggaaaaaatcaaaacttccaGAAAGAGAATGCAGTTTCTTTTATCGATTGCACGCAATATTAAATCCGGATGATGGTACATATGAAATGAAAAACTTTGAAGATACTGGTGACGATGATGAACagAATAATTCCAATTCTAATGATAACTTTATTTCCCTTCAAAATGTTCCTAGTGctaaacgttttcaaattgcAGATATACCTATAGATCCCTTAGAAAATGGAGGTAGTGGTAAGATAACACCTTCTAGTCCTAAACGTAGTCGTACAGATCAAAAAGATTCTGCACTGCATACAAGTGGTTGCTCGTTTTGTAGTTCATTAGATCCTATTGATCATTACTGTATATCTTTAGCTCATAGTATTAAGAAATTAGATTCCAGAAAACaggctaaattaaaaatagaaatacaacaaCTAATGTACAAAGCAGAATTTGAtcctgatttttaa
- Protein Sequence
- MADAVEQDQQKNPELIRLLQSGRKSESEIRPTSSENANSPGWEWTVDETSCLLKLIGEYEYLPQIKSKNDQVYTKLSKLMTISGHKKTSEEIKCYWKELKQKYDGYKAGKLEHFEYYEQLNALLLDLNSSSHSEPEIIIIKGEELEGSILHSDSFDNNFSSDEFEQKNGRGVRRNNWTYKETECVVQVLEKYGMPSRTNLRKFCYVIVDYLKQHGYSRSEEQAQVKIKHLRALYNQVVRKSLKEEEFPFFKKIEVLMQNHVVHKVKEIDETQNYIMLDEQSKSDAEDNVATDFSEPVAEEEDTCYKKGRQIWTNKEIRVLLKFIEENGIITGKQLRKVCNKAVDYLASHGYYRSPTQILIRWKNTKALYWATFRKKSKLPERECSFFYRLHAILNPDDGTYEMKNFEDTGDDDEQNNSNSNDNFISLQNVPSAKRFQIADIPIDPLENGGSGKITPSSPKRSRTDQKDSALHTSGCSFCSSLDPIDHYCISLAHSIKKLDSRKQAKLKIEIQQLMYKAEFDPDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00788820;
- 90% Identity
- -
- 80% Identity
- -