Basic Information

Insect: Ctenicera cuprea
Gene Symbol: Tf2-11
Assembly: GCA_958336395.1
Location: OY284494.1:9651041-9658216[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-08 7.7e-06 27.2 0.0 1 34 894 927 894 927 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-08	7.7e-06	27.2	0.0	1	34	894	927	894	927	0.96

Sequence Information

Coding Sequence: ATGGAGATAGAACGGTCTATGACGCCACCGTTGACAGTAGAGCAGCGTTTAAATCAGTTACAGGAACAAGTAAGGTTACTTCAGGAACAATCGGTATGTACTGACATAGACTATAATTGGCAAAACATTCCCGCGTTTGATCCTGGAGTAGTGTCTGGACTATCTGTAAATAAGTGGTTAAGACTTATCGAtgaaaaagcatatttttcccGTTGGGATGATGTGCAGACAACGCGTTACGCAATTGACAAATTAATCGGTCAAGCACGCGAGTGGTATTTAGCCAGAGACAGTATTTGCAGGAACTGGGTAGAGCTTAAAGAAGCTCTAAGAAGTACTTTCGATGTGGATGTTAGCGCGATTGgcgatttatttaaagatgccGCATTATATTCGTCGGCTAAAGACGCGAATTTTCTctcttattataaaaataaactaaattgcaTTCAAAAACTGAAGTGGCAAATTCCAGTTAAAGATCagataaacattattatatCTGGTATTACGGTTAAGGAAGTGCGACAAGCAGCTTTAGCTTGTAATTACAGTAGCTTGGAGGATCTCACGACTTATTTACGAACGTGTGATCAGCAACAAAAGTTCCAAGCCGGCTCTGTAGTTCAAGCAGCTGGCCCTATAAGACCCCTTACaaagcttttaaagaaaaatagtatttggGCTTGGGGTAGTGACCAAACCGATGCAGTTGAATTACTTAAGTCAATGTTAACTGATAAacccattttgaaaatatttgatccACATTTACCAATAGAACTGCACTGTGATGCTAGTTCAATAGGGGTTGGCGGAGTATTAATGCAACAACATGGTACTAATTATCATCCGGTCAGTTATTTTAGCAAACAATGTACTTATGAGCAAAGTAAATATCATTCGTATGAGTTGGAAACAATGGCAATTGTTTTGTCTTTACGGCATTTTCGGGTGTATTTATTAGGTGCAAAATTCGTCATTTATACTGATTGTGCAGCTGTTAGAGCCACAGCTTTGAAGAAAGATTTAATACCGAGAATAGCACGTTGGTGGTTAGAAATTCAAgattacaattttgaagttaaatttcgTCCGGGTTGTAAAATGGCCCATGTTGATTGCTTAAGTAGAAATCCAAACAgtgacataaatattttaaatattatcaatcTTACTGAGTCCGAGTGGGTGACTGCTGTACAATCGCAAGATGATgaactattgaaaataatagaaattttaggCACAAAAAAAtcgtctgaaaataaaaatttctttaataattataagatCACTCGAGGTATTTTATATCGTAAACTCGGTAATTCGCTTAAATGGGTAGTACCTAAATCTGCAAGGTGGCTGATCTGTCGTTTAAACCACGATGATGCAGGTCACTTTGGTTATGAAAAAACTTTAGAGCGAATTAGGCGGAATTACTGGTTTGCTAAAATGGCACGGTTTGTGAAAAAGTACGTAAGTTCTTGTTTGAATTGTTTGTATATGAAATCTACATCTGGAGCGCGTGAAGGGATGTTACATCCGATTGAAAAAGGCATGGTGCCGTTTGAAACAATTCATATTGATCATCTTGGCCCATTTGTGAAATCAAAGAAAAAGAATACCCACCTGTTTGTCGTGGTGGatggatttacaaaatttatttttctagaaCCTGTAAAAAGCACCAAAGTAAAACATGTAGTTAAGGCTCTTGAAAGTCTTTTGTTGTTGTTTGGCAGTCCTACTAGAATAATTTCCGATCGAGGCTCATGTTTCAAATCAGCTACAATGTCAAACTTCTGTAAAAAGTATGGCATTAAACACGTACTGAATGCCGTAGCAACGCCTAGAGCAAATGGACAGTGCGAAAGATACAACAGAACAGTTTTAGACTCCTTACGCTGTTTCAGTgtaaatgatgatgatgaaactTTGTGGGACACTCATGTTAAATCAGTACAGTTTAGTATGAATTCTAGTGTTAATAAAGCTACCGGCAAATCACCTTATATGGTATTAATGGGAGTTAATCCTAAACCATTGGCGgactcatttattttaaatgaagtgGGTGAAAATTTAATGCAAGCTAATTTGACAGATTTGCGTGCTGAagtttcctcaaaaactgcaaaGAGTCAGCAAAAGTCTAAACAAAGGTTTGATGCTTCCCGAAAACCGGCGAAAAAGTACAATGTTAATGATTTAGTTATGCTGCGGAAAACAAACTATCCTGCCACGGGCACTAGTAAGAAATTGTTACCGAAATTCAAAGGACCATTTCGAGTTACCCATGTTCTTCCCAACGACAGATTTGTTGTTGAAGACTTACGGGGTCATCGTAAGTCAAAAGCTGTTATTGCGGTGGATAACTTAAAGCCGTGGATTGTAATGAATGATCCGGAATCTCAACCAATtgatatCCAACACAAATATTTTCAGCAAACTGATGAACAGACAACTACTACAGAAACAGAGACTCTGACTATCTCACAATCACCACAACCATCTACCTCCTTTCAATTTGTTGAAGAGGACATAGAAGAAATTGTAGACACAGTAACAGCTCCAACCTCAATTTCGTCAACAATTATAGTGCCAGAAAAAGAACCGATTGATGAGGAAGAAGAAATGCCGAGAAATTACACACGTGAAACTGCTATCCTTGCCTACACGCGTGAAGATCTTGAAAATGCAATAAACGCAGTTAGAAATGAAGGTAGAAAGCAAAGGAAAGCAGCGAGAAGTTTTAATGTTCCCGAATCTACTTTAagataa
Protein Sequence: MEIERSMTPPLTVEQRLNQLQEQVRLLQEQSVCTDIDYNWQNIPAFDPGVVSGLSVNKWLRLIDEKAYFSRWDDVQTTRYAIDKLIGQAREWYLARDSICRNWVELKEALRSTFDVDVSAIGDLFKDAALYSSAKDANFLSYYKNKLNCIQKLKWQIPVKDQINIIISGITVKEVRQAALACNYSSLEDLTTYLRTCDQQQKFQAGSVVQAAGPIRPLTKLLKKNSIWAWGSDQTDAVELLKSMLTDKPILKIFDPHLPIELHCDASSIGVGGVLMQQHGTNYHPVSYFSKQCTYEQSKYHSYELETMAIVLSLRHFRVYLLGAKFVIYTDCAAVRATALKKDLIPRIARWWLEIQDYNFEVKFRPGCKMAHVDCLSRNPNSDINILNIINLTESEWVTAVQSQDDELLKIIEILGTKKSSENKNFFNNYKITRGILYRKLGNSLKWVVPKSARWLICRLNHDDAGHFGYEKTLERIRRNYWFAKMARFVKKYVSSCLNCLYMKSTSGAREGMLHPIEKGMVPFETIHIDHLGPFVKSKKKNTHLFVVVDGFTKFIFLEPVKSTKVKHVVKALESLLLLFGSPTRIISDRGSCFKSATMSNFCKKYGIKHVLNAVATPRANGQCERYNRTVLDSLRCFSVNDDDETLWDTHVKSVQFSMNSSVNKATGKSPYMVLMGVNPKPLADSFILNEVGENLMQANLTDLRAEVSSKTAKSQQKSKQRFDASRKPAKKYNVNDLVMLRKTNYPATGTSKKLLPKFKGPFRVTHVLPNDRFVVEDLRGHRKSKAVIAVDNLKPWIVMNDPESQPIDIQHKYFQQTDEQTTTTETETLTISQSPQPSTSFQFVEEDIEEIVDTVTAPTSISSTIIVPEKEPIDEEEEMPRNYTRETAILAYTREDLENAINAVRNEGRKQRKAARSFNVPESTLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -