Basic Information

Gene Symbol
ct
Assembly
GCA_958336395.1
Location
OY284493.1:38719166-38722189[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-33 1.2e-28 100.5 0.0 2 77 264 340 263 342 0.96
2 2 7.7e-31 1.5e-26 93.8 0.0 3 76 482 556 480 559 0.95

Sequence Information

Coding Sequence
ATGAAACCCCACCTTGAAGACAGCCGCAGCAATGATGACTCGAAATCTCCTCACGGACAGTGTTCCAGTCCATTCTCGCGAGAATTGGCAAAACAGAAGTTGAAGAAATACGAAAACGATGATATACCTCAGGAAAAAGTAGTTAAAATATATCAAGAGGAATTAGCAAAACTTATGGGAAAACGTATCGAAGACCTCAGAAGGGACCCATTCCCTGGTATGTTTTTCCCACATCTATTTAGCGGGGGTCCAATGGATAGAACGCAGGACGAAATTCGAATGGCTTTAGATGCTTATCATCGCGAGCTTTCCAAATTGAATCAATGCCCAAATCCAGCCCAAATGACGAATTTGGGCCTATTAGCTTTACAACAGCAAGCTCTCGTTCACCACCATAATCCTTCCATAAATGGGGGTGCTCAAGATTTATCTCTTCCAAAAGAAAAACCAAAGATGGTAAATGGCGTCGAAGACAAGGAAAAAGACTCGGATGATAGTGTTAAGCATTCTGGCAGTGCGTTTAGTTTAGTGCGACCCAAAATCGAGCCAGGAACCCAATCCCAAACGACGAGTTCCACAGCGTCTAGTCCCCTGAGTAACAGTATTTTACCTCCTGCGATGACGCCGACTGACGATTTTTCGACATCAGCAGCCGCAAGTCCTCTGCAACGAATGGCTTCCATTACTAATTCGCTTATATCGCAACCTCCCTCCCATCAGCATCACCCAACAAGCCAACGACCATTGAAAGCAGTTTTACCTCCAATAACACAACAACAATTCGATATGTACAACAATCTCAACACCGAAGATATCgtcaaaaaagttaaagaacaaTTAAGCCAGTATTCCATAAGTCAAAGGCTTTTTGGAGAAAATGTCCTTGGATTATCGCAGGGTTCGGTGAGTGACCTTCTGGCACGACCGAAACCCTGGCACATGCTAACCCAGAAGGGACGAGAACCATTCATTCGTATGAAGATGTTTTTGGAAGATGACAATGCGGTCCACAAACTCGTAGCAAGTCAGTATAAAATTGCCCCGGAAAAACTTATGAGAACTGGTGGATATGGAGGAACTCCTTGTGGGACTCCTCTTAGCAAACCAATGCCTCCAACACAGAAAATGCTCAGCGAAGCTGCAGGTTTCCTCAACAAAATGCAAGAAAATCCAAATTTACTTCCGCCCTCGCTCCAGATGGTTGCTAACCAAAATCCAATGATGAACCAACCCCATGGACCACCCATTCTGCTTACGCCACCTGGAATTCCACCTCCTCCACACCCTATGAGCATGCAAACTCCGGATCATCATATTATGAAAAAATCCAATCCAAGCCCTCATGGTATTCCACATCCGCCCCTAGTTCAACACCAAAGCGCAAATTTGCGAAGCCTAAATCCTCATATATCACCAAGCGTTTATGAAATGGCCGCACTCACGCAGGATTTGGATACGCAAGTTATTACCACTAAGATCAAGGAGGCGCTACTTGCCAACAACATTGGTCAAAAGATTTTCGGTGAAGCAGTCTTGGGGTTATCCCAAGGATCAGTGAGTGAATTGTTATCAAAACCAAAACCTTGGCACATGTTAAGCATAAAAGGCAGGGAACCATTCATTCGCATGCAATTATGGCTAAACGACGCTCACAACATTGAGAGACTACAGGCATTAAAGAATGAGCGTCGTGAAGCCAACAAAAGGCGTCGTTCCACGGGTGCTGGTGCGCACGACAACAGTTCCGATACCTCTTCGAACGACACCTCAGAGTTTTATCATTCCAATTCGCCTGGACCTGGTCCTCCTTCGGCTAAGAAGCAACGGGTTCTGTTTTCTGAAGAACAGAAGGAAGCTCTTCGATTGGCATTTGCACTCGATCCGTATCCAAATGTAGCAACCATAGAATTTTTAGCTGGAGAGCTAGGACTTTCAAGTAGGACCATAACAAATTGGTTCCACAATCATCGAATGAGACTAAAGCAACAAGCACCGCACGGTATGCCCGCTGACGTGCCGCCCCGTGATCAAAGTGGAAACCAAGCACCATTTGATCCTGTCCAGTTTAGGCTGTTATTAAACCAAAGATTATTAGAATTATCGAAAGAACGAATGGGTTTGGGTGGAATTCCGTTGCCCTATCCACCGTATCTTTCCACAAATCCAAACTTAGCCGCTCTTATTGGACGAGGTCTTTTGCCTTCTGCTGATATGGATCTTGCCATGTTAGGAAATGTTGTCAAGGAACAAATGAGTGGTTTAGATTTATCAATGACTTCTTTAAAGAGAGAACCCGATGACTACGAAGACGAAGTTGAAAGTAATGTGGGTTCAGACGATTCCAATATGTCCGATAGTGTGCACGGAGAAGTTAAAGCTGAACCAAAGGAAACGCCTTTAACCCAAATAGGAAATCAAGGACGTTCGTCAAGAAGGAAACCGGCCGCCCCTCAGTGGGTCAATCCAGAATGGCAAGACGAAAAGGAGAAGCAGTCATCGGGCAACGAAGTTATAATAAATGGTGTGTGTGTTATGCAAACGGAGGACTATGGCAGAAGAAGTTTAGAAGAAACCGTGCGAGTTGAACCTACTCCGGTAATGGATAGGTTCGAAGATGACCAAAGTGATGCCTCGTCCGTTAGCCACGAGCATGAAAACGAAACACACACCGAACAAACCGAAGACAAAGAACAGGGTGACAATGTGAAAGAAACAAGTGAACCTCAAACTACAGAGGAAGAAAGTGACAAAGCAGTAAAACGAGAAAACGAAGACGAAAGATGGGATTATTga
Protein Sequence
MKPHLEDSRSNDDSKSPHGQCSSPFSRELAKQKLKKYENDDIPQEKVVKIYQEELAKLMGKRIEDLRRDPFPGMFFPHLFSGGPMDRTQDEIRMALDAYHRELSKLNQCPNPAQMTNLGLLALQQQALVHHHNPSINGGAQDLSLPKEKPKMVNGVEDKEKDSDDSVKHSGSAFSLVRPKIEPGTQSQTTSSTASSPLSNSILPPAMTPTDDFSTSAAASPLQRMASITNSLISQPPSHQHHPTSQRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGTPCGTPLSKPMPPTQKMLSEAAGFLNKMQENPNLLPPSLQMVANQNPMMNQPHGPPILLTPPGIPPPPHPMSMQTPDHHIMKKSNPSPHGIPHPPLVQHQSANLRSLNPHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIERLQALKNERREANKRRRSTGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQAPHGMPADVPPRDQSGNQAPFDPVQFRLLLNQRLLELSKERMGLGGIPLPYPPYLSTNPNLAALIGRGLLPSADMDLAMLGNVVKEQMSGLDLSMTSLKREPDDYEDEVESNVGSDDSNMSDSVHGEVKAEPKETPLTQIGNQGRSSRRKPAAPQWVNPEWQDEKEKQSSGNEVIINGVCVMQTEDYGRRSLEETVRVEPTPVMDRFEDDQSDASSVSHEHENETHTEQTEDKEQGDNVKETSEPQTTEEESDKAVKRENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2