Ccup030359.2
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- ARID5B
- Assembly
- GCA_958336395.1
- Location
- OY284490.1:52881911-52890202[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-25 3.9e-21 76.9 0.0 1 89 149 235 149 235 0.93
Sequence Information
- Coding Sequence
- ATGAGAGATGAAAAATGGAATAAAGGTCCTTCAGTGATAATTTTGAGCTATCCTTCATACTGTCGGTATCGAGGAGTAATGAAGCGATTGGAAGGTGTTGAAGACGAATATCTAAAACATACAATAGTTAAAATTCTTGGAGGATTTTCTGCCCCTAGTAAAAACACACGAGTTCTCTTCTGTAGAGATACATTTGATTATCCCGAACTAGAAGGACATGAACTCTTGTGCAACCACTTAGCTCCTAAATTAAAAGGTAGGCCCAGGGGTAGACGAAAAAAACGAAGTCTGTCTCCAGGCTCCGAGAGCAACGAATCCGAATCTTCTGTATGCAATGTGTTCAATACTACCAAAaCAAAAATAATGACTGAAGGAAGCCCAAATGGTCTTCGCTCTGACACAACTTCTCCAAGACGAAGCACAAGGTCGCTTGCTGGAAACACAGAAAACAAAGaattccttaaaaaattaaatgctttcaTGAAATCAAATCGTACACCAATCGGACGAATACCTTCGTTAGGATACAGAGAATTGGATCTTcattcattttttacaaaagtaaacaaattagGGGGATACAACGCTGTCACTTCAAATCGTCTATGGAAATCCATTTTTGATGATCTCAGTGGCAATTATATTAGTACAAGTGCAGCTACAGTAATTAGAAGACATTATGAAAGatttCTGTTGCCATATGAGCGTCACCTCAAAGGAGAAGAGTACAAACCCTCAGCGTCATCCATCAAACGAACGAAAAGTAATTCGGGAAGCGGTAGTGATGCGGATACAAGTGAAAGTACAAGTTGTAGTGGTAACAGTACACCTATTCCACAACTTACTGTTATTCCTATACCCTCAACCCCTACAGCAACTGATACAAAGgagCCCCacttaacagaaaaaatagacAAAGCAAAACCTGAAGTAAAAACTTCATCTCTTAGAAGTGTAAGAGTTAAACCAGAACGTTTAAGAGAGCATGCATCAAAAGAAAAGGCAGCCATTATAGAAAAACCTACAAATTCAGAAAGcaacaataaaatacttaatgaatatagtgttgatattaaaaacgaACCATTATCACCACCGAGAAGCATAAGTGAAAATAGTTTAACAAGTAATGGTTTAATAGTGGAATTGATTAATGCAGGTACTCCAACAGTtcaacaaaaaagtgttttaaatgaaatgacTGAAGCTTCCACTGTTCCAAATGATTTGCCACCTACaactattgaaaaaattactcGTTCCCCACCATTTACATCACCAAGTTCGCTGGTTTCCCATAAAACTGATAAAGTTTTAACGCCAGCGGAAGGCAAAGAAAATATAGCCACATGCAATACTAACAATATTGCTGGTGCTCATAATCACAAAAATGCAGACATTGATCTCACAGAGGTGCCATATAAACCAAAAACCCCCGAAATAGTGCATTCAGAATCAGAAGCTTCgaataatattatttcaaacataACCCTCAATAGTTCATTACTACATAgtgtaaaaaaacgaaaattagatattttaaaagaaggTGGATTAGAAGTAACACCAGTTAAACCAACGTCAAATAGTATCGAAGGTAAAGAAATTAAAGATAATAGACCCTCAGTTATACACCATCCTGGTAGCGCACCAACAGCAACTGTAGGACAACTTTCCATCACCTTAGCATCAGATAAACAAGGAACGCTTACATCAACCAACAATAGTATAGAAGTTTCTCAAAGAACTTTACCATCTCCAACAAGTGACATTCAAACGGTACCATCTACAAGTATAATGcgatcaaatttaaaattaaataaaactgtaatgCCATCATCATCAAAGAGCTCATTTTTTTACTTGAATGGGCAATCGCCTCCAAAAGTTGTTCAGTCTAGATCTATTTATTCATACTCAGAAAAAACAGTGTATGGAAATCCGAAAGATTATTTCATGCTACCTCCACGACCACCCCCACAAGCGCCTAAATTTGTTGAAGCTCCAGTTAAACTAAGTGGCGGGGAAATATTAGATTTGACAATAAGAAGTCCGCAAAAACCTATTGTGGAAATTATGCGGGTACCAACTGTTGCATCACGTTTGCCTGCAGGTCCaaaagaaatttcttctaaACATGCATATAAAAATTCTGCAGCATTGCCAGTATTAGACGCAAGAGTTGGTTCAAATTTGGAAATAACTTTAGTGGGTCCAAACTCGACACCTCAcagtattcaacaaaaacaaacaagtagATATAATTCTGGCAGTGCTGCAATGTTTCACAATCAGGCATCGGTACATAGTTCACCAATATCTCACAATTCTACTCCTGCACATAGCAgttataatataaacaataaaagtgcACAAAAACGAACTTTCAGTGgtaattttgttacaaataaaaaagaagaaaatggaAGATTACCTTATTCAATTACTCCCTTACAACAAGCTTATGCACCACGAGATCATAGGCATCAAAATAACACGgaatttaatattgcaaattCTTATAACAGTAGAAATATGCATAAAGTAGAAAGTACCAGACAGCATGTCAAATCTTCACCACAAACTCCTTCCAATTTAAAACCATATGCAAGCACACCTTCATCTATGTTACCAGGTTACCTTACCCAGTTATCTTTGGCATCTAAAATGATGCCACCCTATGTTCCTCAAATAGATCCTATATATTATTCTGCTCTGCAAAGCTTTTATCCTCCTAATCCTTTATCTTCAGTACCACCATTTTTCCCCGTTCCCACAGCTGAACAATTACAGTTTTATACAGATCTTATGGCACGTAATTCTCAAATGAGGTTTCCTTTTCCATATCCCCAAGATGGAAATTCATCGGTGACTGCTAATACAGagactaataattttaaaaaacaataa
- Protein Sequence
- MRDEKWNKGPSVIILSYPSYCRYRGVMKRLEGVEDEYLKHTIVKILGGFSAPSKNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGRRKKRSLSPGSESNESESSVCNVFNTTKTKIMTEGSPNGLRSDTTSPRRSTRSLAGNTENKEFLKKLNAFMKSNRTPIGRIPSLGYRELDLHSFFTKVNKLGGYNAVTSNRLWKSIFDDLSGNYISTSAATVIRRHYERFLLPYERHLKGEEYKPSASSIKRTKSNSGSGSDADTSESTSCSGNSTPIPQLTVIPIPSTPTATDTKEPHLTEKIDKAKPEVKTSSLRSVRVKPERLREHASKEKAAIIEKPTNSESNNKILNEYSVDIKNEPLSPPRSISENSLTSNGLIVELINAGTPTVQQKSVLNEMTEASTVPNDLPPTTIEKITRSPPFTSPSSLVSHKTDKVLTPAEGKENIATCNTNNIAGAHNHKNADIDLTEVPYKPKTPEIVHSESEASNNIISNITLNSSLLHSVKKRKLDILKEGGLEVTPVKPTSNSIEGKEIKDNRPSVIHHPGSAPTATVGQLSITLASDKQGTLTSTNNSIEVSQRTLPSPTSDIQTVPSTSIMRSNLKLNKTVMPSSSKSSFFYLNGQSPPKVVQSRSIYSYSEKTVYGNPKDYFMLPPRPPPQAPKFVEAPVKLSGGEILDLTIRSPQKPIVEIMRVPTVASRLPAGPKEISSKHAYKNSAALPVLDARVGSNLEITLVGPNSTPHSIQQKQTSRYNSGSAAMFHNQASVHSSPISHNSTPAHSSYNINNKSAQKRTFSGNFVTNKKEENGRLPYSITPLQQAYAPRDHRHQNNTEFNIANSYNSRNMHKVESTRQHVKSSPQTPSNLKPYASTPSSMLPGYLTQLSLASKMMPPYVPQIDPIYYSALQSFYPPNPLSSVPPFFPVPTAEQLQFYTDLMARNSQMRFPFPYPQDGNSSVTANTETNNFKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00788305;
- 90% Identity
- -
- 80% Identity
- -