Cvid011666.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptus viduatorius
Gene Symbol
-
Assembly
GCA_964006125.1
Location
OZ023224.1:13151684-13157029[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.024 2.2 9.3 0.6 2 20 45 63 44 68 0.92
2 16 0.053 4.8 8.2 0.5 1 23 71 94 71 94 0.84
3 16 0.032 2.8 8.9 0.7 5 23 487 506 486 506 0.94
4 16 0.89 79 4.3 0.4 2 20 564 582 563 584 0.80
5 16 0.0037 0.33 11.8 0.6 1 21 616 636 616 637 0.94
6 16 0.00023 0.02 15.7 1.7 1 23 644 667 644 667 0.97
7 16 0.033 3 8.8 0.2 2 21 749 768 748 769 0.94
8 16 0.5 44 5.1 5.2 2 23 777 799 776 799 0.92
9 16 0.11 9.5 7.2 2.6 1 23 810 833 810 833 0.94
10 16 0.16 14 6.7 0.0 1 20 869 888 869 890 0.91
11 16 0.056 5 8.1 0.2 1 23 897 920 897 920 0.94
12 16 0.17 16 6.6 0.0 3 21 1050 1068 1048 1069 0.93
13 16 0.69 61 4.7 4.3 1 23 1076 1098 1076 1098 0.74
14 16 6.2 5.5e+02 1.7 0.1 1 10 1107 1116 1107 1127 0.90
15 16 0.00055 0.049 14.4 0.3 1 23 1275 1298 1275 1298 0.96
16 16 9e-05 0.008 16.9 0.1 1 20 1583 1602 1583 1604 0.96

Sequence Information

Coding Sequence
ATGGTAAAACCAACTTCCGAAATATCCGCGAAGAAACGTCCGACATTGATACAGACACACAGTATATCCGTATTGGAAAGAGAAAGTATTGatgcaaaatttcaaaatcgctcaaaaaatcacgaatcgTTGAAATGCGAAATTTGTCATATAACGTACTCGTCGCTACAAGTCCTTACGCGACACACGGTATATTATGGACATCCGAAGTATCCTTGCAGCGAATGCGGCACGAAATTCGCGGACGCGAAACAGCGAAAATTTCACATTTCGTACGCTCACGCGGAGTCGAAAATGCTGAAGAATTATAAACTGAAATGTCCAGTTTGCTGCCAAATGGTTATGTCTCAAAGATTCCTTCAGTCTCATCTCTATCACTATCACAACGAAtgggcaataaaaaattatgatacattttttcccgAACGAATAACGGTGGAAACAGACATTTCTTTTAATACCGACGTTTGCGAAAATGCAACGAAGAATATGACAACGCAGATAACGCCGCAGGGAACACCGGATCAGATGTCGGCGTTGGAATGCAGAGAAGACGTTTCGCCACTTTCGTCGAGAATCACTCCACCCGAAAGTATACATTCATCAAAAGATGGAGATGATATTAAGACGCAGCGTTGCCTTGAAAAGTATAGAAATTGTATGAAATTCGATGCTTTATCGAAGGACTTAAAGAGTGAAGCACACGACGCGAATAAAGAGAGCGAAATTTATAGCGACGAAATACAGAAAGCAGTGCACTCGTGCAAAGAGTGTTATGTGCCGTTAGGGAGAATACAATTAGAGAAAACAATCCCAACGGATGATATTTCTGCGTTAGGAGCACAAGGACcggaaaaaacgattccgCAAAGTGATATACCATTATCAAGAGTACATCTCCCGGAGAAGCCGATCGTAGCGGATAATCTGCCATTGTCGAGAATTCACACACCGAAGAAGACGATGGCAAAGAAAGATCTGTTATTATCGGTGATTGAAGTACCGGATAAACCGATGGCAAGCAataatttgccattttttgaAATCCAAATACCGGATAAATCGATGACGACGGAGAATTCACAATTATTCGAAGACCAAGTGCCGGCTGAACCAATGACTACAGAAAAATGGTCATTCTTAGGAATCCACGTATCTGAGACAACGCCAACAACGGAAAATCAGTCCGGAGGGtccaaaaaagtaaaaacattggaaaaaatcgaaacatttcAATGCCGAGAAGATTGTCTCAATTTTGAAGTTATATCGTCAGATGAGATATGTTTAGGTGAATGGGCGATCAAATCCAAAGCTAATAGAAAGGTCGATACCTCTGCGGAAATTTCAGAAACACCGAACGCCTCTTCTTCCGTTTTCGACGCGAATGATATCGAAGTGATACCGAACCCTaccaaatcgatcgataacgaTCGCAATACCGTGTTAGCGTCGAAAATTTgtgataaatattttccaaGCAAACGCGCGATGCAGCGCCACTTCCGCCAGCGTCACATGATAGCTCACGGGGATGTGGTGTTTTGCGTCTGTGGAAAGGCAATGCCCGGTCGTACGGCAAAGgaacagcatttttttcaacactgcGGCAAGCTGCTTACTTCGATGGACGTCATCAATCGGCCTTCGGAGACTTTCACGTCGTGTCGTTTATTGGAGAAAACTCTCGAATGTCCAAAATGCGGCGAGAAATTTTGGCTGGAAACGTGTCTGAACGATCATCAAATTCGCTGCAAAGTTGCGAAGACTGAAAACAGCGAAAAACGCGCATTAACATTAGAAATACATCGTCAGTACCGTCGACAGGAGCGCAACTCCGCTCAATACGTTTGTAAAGAATGCAACTCAGGATTCAGTACATCCAAAGCGCTTTCGCAGCACAAACAGAAGTACATGAATACCGAAAGGCATCAGTGTCCCATTTGCAAAACGACATTCACCGGTCGTCGTCTCTTGAAAGGACACATCCAATCGACTCACGAACCAAATCGCAAACATCTTTACACCGTTTTTTGTGCAATTTGTCACCAAGGattcacgaaaaatctttACAAACGGATTCACATAATGCATTGCCATTCTATCGAAGGTATTGACGAAACTGAAATCATCGATGTCGACGAAGTATCGATAATTGTCCCTCAAAAGCAAAAACCCGCATTAACCCAGCAGACGCCTCCAAAACGGCCACTTCTGGTCGAAAACGCATTGAAACTCGAtaacaaatgcaaaatttgCAATATCGAATTCGTGAGTCGTAAGCGTTTCATTGATCACATGATATATtacaagaaaaacgaaatagtCTACTGCAACATCTGCGGCAAGCATTTCGAAGGCCAATACATGGCGCATCATCACAACAAGAAGTTTCATTACGCCAAAGATATGCAGAAAGCTTATACGCATTATTGTTCCATTTGCCAAATCGGTTTTATGTACATAACCCATTTGGTAGCTCATATGTCTCACGTCCACGAGGTTCCATTCGATAGCAATAATACACCGAATGCGAACAATCGAATTACGtcaaaatcaaataaataccAATCAAACATTCTTCAAAATTCAGCTTCGTTGAAATACGTCTGCAACATTTGCGAAATAAGATTCCAATCGGCTACCGTATTGGCGAATCACGAATCGAAATATTCCAACGACGGCGAATTCGCCTGTAATCAGTGTCCGAGAAAATTTCGTGCGACGTTAACGCTTCTCGatcatatatcgataaatcactCCGAGGAGGTGGTATCCGGTGGAGTTAAGTGCAGCCGATGCAACGAGAATCTTCTGACCCGAGCGGCTTGGGTATCGCACGTTAAACATCTTCACAACAGCGACGGAACCGAACCTTCggaattttgttttgagaACAACTTATCGTCGTCGAGGGAATTTTCAAATATGGAAATCGAGTTGATTCCGACGAATGATTCGATATCCAGCGGTACGACTTATATCAATTTTGGAAACGCGACGAATCCTACCGATCGCGGAGATACGTCTTTATCTCCGAGAAAAGTCTTCCAGATCCGTAGTTCTGAACACAATCAACCGAGAAAATCATCGATGCCTTGTGCTGCGATTAAGGGAGCGATATCTACAGAGAAGATTTTGACGAATTGCGGTACATGCGGACTCGTGTGCGCGGGACCCGCCGATTTGGCGACACATATGGCAATGTACTCTAATACCGGTTATTATCAATGTACGATCTGCGATCGAAGATTCACGTGGCAAAAATTCTGCGAGAATCATAAGATGAAACATTTTCGTTGCGATCCCagtaattatcatttttgccCAATATGCGACGAAGGATTTGGAGCTATTACGGTGATGAACATGCATAAGGCACATTTTCATCCAATTTGCCCAGATATCGATGAGATAAATGGACTATCATCGGGTAAACGATTCGTCGAAAATAAAGCCATTGCAGCGATGAACGCAACGGGTGTAGAGTTTCGCGAGGAACCGGAAGTAATCGACGTTGAGGAATCGTTGATTATCGAAAGTCCTCAAAGCAATGAGAGAGCCGCGAAATGTATCACCTGCGACGCTTTCTTTGAAAATACAAAGGTGttgaaaattcacgaaaataattttcattcatcgGTATCAGTCACCGGCGCCGCGAAACAAAATAAGAAGGAATCCTACGCAGTCGGTAACCGATTTTACATATTGGCCGGTATCGAGATACTTCCGGAAGCTGCCGATGTTATACAGAAGAATTTCGAACGATACAAAACGAAACTCGGTCTCACGGATTGCGTTTATCGTTACAGTCTCTCGTACAATTGCGATATTTGCCGGATCTCCTTCGCTAGCAACGAATTGCTCAacattcatcgagaaaaatttcatacggTATCGTCGAATgatccgatcgaaaacggAAGACCCGAAAAGCCAAACGTCTATCGAGGAAAAGTTCAGTTGCTATCGTCGAAAGATCCAATCAAAAATGGACAATCCGCAAAGCCAAatgtttatcgagaaaaaatttgtatgttATCGCCGaaagatccgatcgaaaatgcaaAACCGGAGAAGCAAAACATTCCTCGAGGGAAAATTTGTATGTTATCGCCGAAAGATCCGATCGACAATGCAAAACCGGAAAAGCAAAACATTCCTCGAGGAAAAATTTGTATGTTATCGCCGAAAGACCCGATCGAAAATGCAAAACCGGAAAAGCAAAACATTCATCGTGAAAAAGTTTACACGGTATCGTCGaaagatccgatcgaaaatgcaaAATCGGAAAAGCAAAACATTCATCGTGAAAAAGTTTACAcggtatcgtcgaaaaatccgatcgaaaatgtaaaatcgGAAAAGCAAAACATTCATCGTGAAAAAGTTTACAcggtatcgtcgaaaaatccgatcgaaaatgcaaAATCGCAAAAGCAAAACGTTTATCAAGGAAAAATTCACACTATATCGGCGAAAGATCTGATCGAACTTGCGAAATCCGAAAAGCAAAACCTAGTGGAGACATTCAACGTTAAAAGAACGGCAACGAAACGATCGTATGGAAAGGTTACGTCGGAAGTTGAGAGTTCGTTGTCGGCATCGGATTTTTCGTCGGaccgaaacatcgagaaaccaTCGACAACAGCCGAGTCATCGAAGAAGATACTTCCAGTAACATTTCGTAAGAGTATTTTGAAATCGCATATCAGCACGGATCCCGGAAAACAGGTGGTACACTACAGATGCAAGATGTgcgatattattttcgtcaccAAAAGTCTGTTGAGAGTACATCAGGTCAATGGTCAGTGTTTGAAAGGTCCAGTCCAGCAAATCGACGATGAGATTTCCGTTATCGAAAGCCGCGAATTAGCAAATTTAACCGACAAGCAAAAACTTTCCGATCGAAATTGTCAATCGGACCGCGATatcgaattctcgaaaatatcgaaaccaGCGAACGAATTGGACGTTCGTTACGCTCCGATTggtaaaatttcaaacaatgaCGAGTATAAAGCATCGTCGAGTCCAAACGCCCGAAGTGTCTCGCCGTCGCGTATGCGACTCATAAATCTACCACCGGGCAACTATAgaattggaaaattgaaaGTGCGACAATTCGCTagcaatacatcgcgaaatttgCTCAACGAAACGGGAACGAAAAGAAAggacgaaatcgaaaaaaacgtcgccCCTCTGACGAAGCGACCGAGAAAGGTTTTTGATCCTGTTGCGTTTCGGGAACTCTGTAAACAACACAACTTAGTGCCTGCGACTGAGAATCGCAAAAAAACATCTCCGAATGTTCCCTTCGAGATCGTATTGCATTAA
Protein Sequence
MVKPTSEISAKKRPTLIQTHSISVLERESIDAKFQNRSKNHESLKCEICHITYSSLQVLTRHTVYYGHPKYPCSECGTKFADAKQRKFHISYAHAESKMLKNYKLKCPVCCQMVMSQRFLQSHLYHYHNEWAIKNYDTFFPERITVETDISFNTDVCENATKNMTTQITPQGTPDQMSALECREDVSPLSSRITPPESIHSSKDGDDIKTQRCLEKYRNCMKFDALSKDLKSEAHDANKESEIYSDEIQKAVHSCKECYVPLGRIQLEKTIPTDDISALGAQGPEKTIPQSDIPLSRVHLPEKPIVADNLPLSRIHTPKKTMAKKDLLLSVIEVPDKPMASNNLPFFEIQIPDKSMTTENSQLFEDQVPAEPMTTEKWSFLGIHVSETTPTTENQSGGSKKVKTLEKIETFQCREDCLNFEVISSDEICLGEWAIKSKANRKVDTSAEISETPNASSSVFDANDIEVIPNPTKSIDNDRNTVLASKICDKYFPSKRAMQRHFRQRHMIAHGDVVFCVCGKAMPGRTAKEQHFFQHCGKLLTSMDVINRPSETFTSCRLLEKTLECPKCGEKFWLETCLNDHQIRCKVAKTENSEKRALTLEIHRQYRRQERNSAQYVCKECNSGFSTSKALSQHKQKYMNTERHQCPICKTTFTGRRLLKGHIQSTHEPNRKHLYTVFCAICHQGFTKNLYKRIHIMHCHSIEGIDETEIIDVDEVSIIVPQKQKPALTQQTPPKRPLLVENALKLDNKCKICNIEFVSRKRFIDHMIYYKKNEIVYCNICGKHFEGQYMAHHHNKKFHYAKDMQKAYTHYCSICQIGFMYITHLVAHMSHVHEVPFDSNNTPNANNRITSKSNKYQSNILQNSASLKYVCNICEIRFQSATVLANHESKYSNDGEFACNQCPRKFRATLTLLDHISINHSEEVVSGGVKCSRCNENLLTRAAWVSHVKHLHNSDGTEPSEFCFENNLSSSREFSNMEIELIPTNDSISSGTTYINFGNATNPTDRGDTSLSPRKVFQIRSSEHNQPRKSSMPCAAIKGAISTEKILTNCGTCGLVCAGPADLATHMAMYSNTGYYQCTICDRRFTWQKFCENHKMKHFRCDPSNYHFCPICDEGFGAITVMNMHKAHFHPICPDIDEINGLSSGKRFVENKAIAAMNATGVEFREEPEVIDVEESLIIESPQSNERAAKCITCDAFFENTKVLKIHENNFHSSVSVTGAAKQNKKESYAVGNRFYILAGIEILPEAADVIQKNFERYKTKLGLTDCVYRYSLSYNCDICRISFASNELLNIHREKFHTVSSNDPIENGRPEKPNVYRGKVQLLSSKDPIKNGQSAKPNVYREKICMLSPKDPIENAKPEKQNIPRGKICMLSPKDPIDNAKPEKQNIPRGKICMLSPKDPIENAKPEKQNIHREKVYTVSSKDPIENAKSEKQNIHREKVYTVSSKNPIENVKSEKQNIHREKVYTVSSKNPIENAKSQKQNVYQGKIHTISAKDLIELAKSEKQNLVETFNVKRTATKRSYGKVTSEVESSLSASDFSSDRNIEKPSTTAESSKKILPVTFRKSILKSHISTDPGKQVVHYRCKMCDIIFVTKSLLRVHQVNGQCLKGPVQQIDDEISVIESRELANLTDKQKLSDRNCQSDRDIEFSKISKPANELDVRYAPIGKISNNDEYKASSSPNARSVSPSRMRLINLPPGNYRIGKLKVRQFASNTSRNLLNETGTKRKDEIEKNVAPLTKRPRKVFDPVAFRELCKQHNLVPATENRKKTSPNVPFEIVLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-