Cvid012612.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptus viduatorius
Gene Symbol
ab
Assembly
GCA_964006125.1
Location
OZ023224.1:21506134-21516179[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 4.1 3.6e+02 2.3 0.1 4 19 351 366 351 369 0.85
2 9 8.2e-07 7.3e-05 23.3 1.8 1 23 627 649 627 649 0.98
3 9 1.1e-05 0.00096 19.8 2.4 1 23 655 677 655 677 0.98
4 9 2.1e-06 0.00018 22.1 0.3 2 23 686 707 686 707 0.98
5 9 1.3e-05 0.0011 19.6 0.1 1 23 713 735 713 735 0.98
6 9 8.3e-08 7.4e-06 26.5 2.4 1 23 741 763 741 763 0.98
7 9 1.5e-06 0.00013 22.5 1.6 1 23 769 791 769 791 0.98
8 9 8.3e-05 0.0074 17.0 7.7 1 23 797 819 797 819 0.98
9 9 0.00013 0.011 16.5 1.6 1 21 825 845 825 846 0.95

Sequence Information

Coding Sequence
ATGATGGGCGAAGTGATAAGAGTATCGGGACGAGCACCGGATGTCGGTGACCTGTTGAGAGAGGCAATGGTGTCACAGAAATTCGCGGACGTAGCTCTTTGCTGTTCCGGTGGGCAAAGATTTCTCGCTCATCGTCTCGTCTTATCGGCCGCCAGTCCTTACCTACAGAAAGTATTGTTGGCCCACGGGAAAGCTGCCGGTTACTGCGAGCGAATAACAGTGATACTGGCGGAAGTCGAGGGACCGGAACTCGCGGCGATCCTCGGTTTCGTCTATACCGGAAGTGCGACGATTCCGCGCTCGCGTCTCGAAGCTTTCACGCGGGCAGCCGAGACGCTTCAAGTGCGAATTCCCGCGTTCGACAATGGTCGTTCGAGCAACGACTGCAATCTCGATAATGTCAAAATCGAAGAAGCGAAGATCGACACGCGATATCTCGGATGCGATCGGTATCCCGCGGACGACAAGACGTTTAAATCCACGAGTTGGCCTTTCGACGGTTGTTTGCAACGCCGCGACTGGTTCGCAATGGAAAAGCCCGGTATATCGTCGATCGTACGTACATCCAacaatcgaatcgaatcgtgtctcgaaacgaacgaaaatattaaattacgcgagagagagattttTCACGGCGAATCTTGGATAGAAaagaatttaccgattttcgatggaacgatcgacgacaaTCGGTCCGAAGAAGGAAGTTGCGACGATTCCCGTTCGCGTTTATCTCGACGCGATACATTTCGCATCGACGATAATTCCGTGTCAAGGATGAGCGGGGAATCGGTTTCGCGACGTTGGCACGAGGCTACGAAGATACAAGACGTTGGGGGAGTAGCGAAACAGCGGGATAATAATGATTTGGAAGGTACGCTAACGGAGAACGTGCCCTCGTTGCCGCTGGTGCACCGCACGACCGGTCGATCGAGTGTCACCTTCGAGAAACAGGATTACGATGCCGCCGCGGCGATGGTAACAGTTGCCAGCGGGAACCTTCCGACAACGGCTGCTACCGTCACCTCGAACATCGCTACGAACGAACCTATCTGCGGCGAAAGTTGTTGTAGGTGGACAACGCCGAGAAGACACGTGGCGAATCGCGTGCCCGCATCGCCTTGGATACAACTCGCCAAGCCGGCTCACCACTCACCCAAAATTCAGCCTATCGTCCTTCGCAATCGGgAAGAAATTGTGGAAACGACTCGTCCCGAATGGAACAACGAGTTAACCTCGTCGCGTGGCAAACACACGTGTCCCTTCCCATCGGTTCCGCTTAATCTTCATCGCGCAGTGTCCCCTATCGTTGATTGTTCGCTCTATGATTTTCGAGTTTCTACGAATTTGCGCGATTCTACGAATTGTCAATCAATCGCGTTTCCGATCGCATTGGAAGAATCCTCACCGCGAATCGCGGTTACGGAAGTCCCGCGAACGTTGTCCTTCGACGATACGGTCGCGTCATCGCCCGACGAGGGTTCGAACACAACCGCCGGTATCGCGCAACCGCGGGGCGTCCTTTCGCAACACTCGAGCGTCAACGATTCGACGGCATGCGCGATTCGTCGGACATCACCGAGAGTCGAACTTTCACATCCGATAAGCCGATTGTGCgatacgattaattatttcgtcgacGACAGCGCGGACCGCGACGAGTCTacgaacgataataatttaaagaCCGCGAGAACCGAGGAGATTAAattgaacgaagaagaaacatTGAGTTTCGAgtcgaaattaatatttccacCGACGGAGAGAATCGTTCGGAGCgacaataacaacaatgagGCCGATTCACCGGTAGccgaaattacgagaaacttGACCGCGGCGCCAAGCGACGGTACCCCCGGTTCCGAGGATCACAGATGCGAACAGTGCGGCAAAACTTTTGTCACTCGAGCCTCGCTCAAGGTTCACGGGCGCACGCACTCGGGCGAAAAACCCTTCCGTTGCACTGACTGCGGTAAGGAATTTTCGCAACTGCGTAACTACAAATACCACCGTAGCGTACACGAGGGTACGCGGGAGTTCGCTGCAACGTGTCCCGAATGTGGAAAATACTTCAACGATCGCGGCTATCTGAGTTCTCACATGAAGATTCATCGTAATCGCAAGGAGTACGCGTGCGCCGAGTGCGGCAAGAGTTTTAATCAGCGCGTAGCTTACAATATGCACGTAAGGATACACACCGGTGTTAAGCCTCATCAGTGCGAAGAGTGCGGCAAAGCGTTTTCCCGAAAAATGCTATTGAAACAGCATCTTCGCACGCACTCCGGTGAGCGTCCGTATCAATGCGAAATTTGTCACAAAGCGTtcgccgatcgatcgaacatGACGCTGCATACGCGACTGCATTCGGGTCTGAAACCCTATCAGTGCACATTGTGTACGAAAgcctttacgaaaaaacatcatcTCAAAACGCATCTTAATTATCACACCGGAACAAAGCCGTATTCGTGTCCGAATTGTTCGCTCAAATTTTCGCAAAGCAGCAACATGAGGACGCATTACAAAAAATGCACGGCCGCCGATGGTGCAAATTCTGCCGACCGATTGAACCCCCGACGAAACGATAATAACGGCTCGCCGCTCGTAGCCTCGAGTTCGATCGTTCCTCTCACGGTCGACCCCGAAAAACCAACTACCGGAAGAACCAACGCTCTTACGCCGCCGAGTTCCGATCGGGAGTCCCCCAATATTTCAACACCATCCGCGGAACGGAAATCCAATCGCGGACTTTATACTTCTGCCAGATCGAACCAAATTCCCCATACTTGA
Protein Sequence
MMGEVIRVSGRAPDVGDLLREAMVSQKFADVALCCSGGQRFLAHRLVLSAASPYLQKVLLAHGKAAGYCERITVILAEVEGPELAAILGFVYTGSATIPRSRLEAFTRAAETLQVRIPAFDNGRSSNDCNLDNVKIEEAKIDTRYLGCDRYPADDKTFKSTSWPFDGCLQRRDWFAMEKPGISSIVRTSNNRIESCLETNENIKLREREIFHGESWIEKNLPIFDGTIDDNRSEEGSCDDSRSRLSRRDTFRIDDNSVSRMSGESVSRRWHEATKIQDVGGVAKQRDNNDLEGTLTENVPSLPLVHRTTGRSSVTFEKQDYDAAAAMVTVASGNLPTTAATVTSNIATNEPICGESCCRWTTPRRHVANRVPASPWIQLAKPAHHSPKIQPIVLRNREEIVETTRPEWNNELTSSRGKHTCPFPSVPLNLHRAVSPIVDCSLYDFRVSTNLRDSTNCQSIAFPIALEESSPRIAVTEVPRTLSFDDTVASSPDEGSNTTAGIAQPRGVLSQHSSVNDSTACAIRRTSPRVELSHPISRLCDTINYFVDDSADRDESTNDNNLKTARTEEIKLNEEETLSFESKLIFPPTERIVRSDNNNNEADSPVAEITRNLTAAPSDGTPGSEDHRCEQCGKTFVTRASLKVHGRTHSGEKPFRCTDCGKEFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYACAECGKSFNQRVAYNMHVRIHTGVKPHQCEECGKAFSRKMLLKQHLRTHSGERPYQCEICHKAFADRSNMTLHTRLHSGLKPYQCTLCTKAFTKKHHLKTHLNYHTGTKPYSCPNCSLKFSQSSNMRTHYKKCTAADGANSADRLNPRRNDNNGSPLVASSSIVPLTVDPEKPTTGRTNALTPPSSDRESPNISTPSAERKSNRGLYTSARSNQIPHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00397528;
90% Identity
iTF_00398234;
80% Identity
iTF_00398234;