Basic Information

Gene Symbol
cdc5l
Assembly
GCA_964006125.1
Location
OZ023220.1:25270356-25272388[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5e-16 9.1e-13 48.4 0.8 3 46 10 54 8 54 0.96
2 2 0.14 1.3e+02 3.1 0.1 4 13 63 72 62 77 0.90

Sequence Information

Coding Sequence
atgccGCGTGTTATGATAAACGGAGTAGTTTGGTGCAAAAAAGAGGATGTAATTTTGAAAACGGCTGTAGAAAGACATGGAGAAAATCAGTGGGATCTCGTAGCTTCGTTGCTGAGTGGAAAAACAGATCGACAGTGCAAAGCGCGTTGGACGACGTGGCTTGATCCGAGCATAAAAACAATCCAAtggacgagagaagaaaaggaaaaattaatgtatctCAATAAAATAATGACCAATAAGAGAGAAACTACTGCAGCAATGATCGGACGTCCTACGGATGAGTGTATCGGCGGATATAATTATTCATGGTACGAAGCGCGAAGACAAACAGAAAACCCAAAAGAGGTCAACAACCCGGAGAGCATCGATTTTCCGAGGATTGAACTGAATTGTGAAGCGCCGCGAACTACTACACTGGACAGCcaagaaaacgacgaaaatgATCCGCAAATACTGGGACAAGCGCGGGCAAGACTCGCGAATacgcaaagtaaaaaaagcaGACGTTTCACGCGAGAGAAACAGATCGCTGTTATTCGTCGCTTGAAGCATCATCAACGTATgatagagaagaaaagaagcgaGCGTAACAGGATTTTCAATTGCAACAGCGAGAATTCGATAAACGAGCGAACCGATTCGTGTTTTTACGACTCATCGACAAAGGGCACGGTGAATAACAACTTTTCACCATTTTTCGCGCGACATCCGAACGATGAGTACGAGAAGACGAGCGAAAAGACGAAAGAGATCAAGAGGCGGAGAGAAAATGACGTTGCAATCGACACGCTCGATGACGATGAGACATCGACGAAACGAAGCAAAGTACTCGTTGTACCGGTACCGCAATACTCTTATAACTTGCACGCTTTTCACGACGTGCATTGTACACCGGATTTCCAATTTACGAGTAATTATCACATATTTCGACAATGCGACGTGTAA
Protein Sequence
MPRVMINGVVWCKKEDVILKTAVERHGENQWDLVASLLSGKTDRQCKARWTTWLDPSIKTIQWTREEKEKLMYLNKIMTNKRETTAAMIGRPTDECIGGYNYSWYEARRQTENPKEVNNPESIDFPRIELNCEAPRTTTLDSQENDENDPQILGQARARLANTQSKKSRRFTREKQIAVIRRLKHHQRMIEKKRSERNRIFNCNSENSINERTDSCFYDSSTKGTVNNNFSPFFARHPNDEYEKTSEKTKEIKRRRENDVAIDTLDDDETSTKRSKVLVVPVPQYSYNLHAFHDVHCTPDFQFTSNYHIFRQCDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-