Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_964006125.1
Location
OZ023223.1:9167439-9170123[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2 1.9e+03 -0.6 0.0 3 18 166 181 164 182 0.88
2 6 6 5.7e+03 -2.1 0.0 23 43 232 254 231 257 0.70
3 6 1.4e-11 1.3e-08 35.1 0.6 2 44 264 308 263 310 0.95
4 6 2.5e-13 2.4e-10 40.7 0.2 3 43 319 363 318 366 0.96
5 6 4.3e-12 4.1e-09 36.7 0.0 1 45 370 415 370 416 0.93
6 6 4.5e-14 4.3e-11 43.1 0.0 1 41 423 463 423 465 0.98

Sequence Information

Coding Sequence
ATGATTGATTCAGAGGACGACAGTGAAATTCTCGATGAGATAAGAGCCCTCGAGGATGTTCTCGCGAAGGACGAATGGTCAACGTCGTCGAGCCTTCGCAACGACGTTACTCTGTGTAACCTATCCTCACGCCGGCTGAACGCACCATCCCGAGGTTTCGGCGAGGTGACGCCGTACCGAGAGTCGGAAGTTGTCGTCACCGACGTAACCGTTCCCCGCACAGCGTacgaaacgaacaaaaaactAATCGAACTCCTTCAAGAAGCCAGACGTGAGTTATTAACGATACTTGAAAAATGTGTCGAGAACAAAGCGATTctcgaggagaaaatacgcATAACCGCGATAAacacgaaaacatcgaaacttcaAATCGGCGCGGCAGGAATGCCGTACTTTAAGGatgccaaacatttttttgccccGAGAAACAAAGACGCAGTGACaaaagttcaaaaaaatgaactccAGGTAGTCCAGCTGCGTCTCACCTGTCCCTGGACTCCGCACGACAGAAACATTTTGTGGAGAGCCATCCGTCAGGAAGCCTCCACCTCCGTTCTTAATACCGGAACCCCTGACCACGGCGAATCGCCAAATCAGTCGAATAACGAAAATCGTCAAAGCGAAGTGTtgaatttaccaaaaaatttcaaatccatGATTGGCCCATTGGATTCACGCGAATTCGATTGGTTAAAAATAGCGGCAACCGATTTTGACAATCGTCACACTCCCGACGAGTGTCGGGTGATGTGGAGAGTTTTTTTGCATCCCGAAATAAATCGTCACAAATGGACGCAGGCGgaggataaaaatatcgaaaaattgagtaaACGCTACGGACATCAAGATTGGGAGGCGATAGCTGTAGAATTGGGGACTCGGAGAAGCGGCTATCAATGTTTCATTCGTTACAATACTAATAATCGTTCCTCATGTTTCAAAGTCGATCAGTGGACACCGGAGGAGGACGCAAAATTGCGACGatgcatcgaaaaatttcagatAGGTCACTATATTTCGTGGGGAAACGTCGCGAAATATATGGACGGAAGAAGCAAAAATCAGGTGTACAATCGTTGGAACGCCGTgccgaatttgaaaaaaggtCGATTTACGGCCGATGAAGACGCGAAATTATTGGAGGCCGTCGCCAAATGGGGACAAAATTTCGCAAGAATATCGGAACAAGTTATGCCGAATCGTTCGTGCGCTCAGCTCAGCGATCATTATCAAACGCTCGTGCAACGCGAACACGGAGTACGAAATTCGTGGAGCGTCGGCGAGGACGCGATGTTATTGAAGCTTTACGCGAAATACGGCTCCGATTGGTCGAACATCGCGGCGAAATTACCGGGAAAAACTCGGACTCAGGTGCGTCATCGTCACAAGGCGATTCTGCGTTATTGGGATCGCGGTATATCGTTGTACAGcataagacgatcgtacgataAAAGCGAAGCGAGTAACGACGTCGTCGACACCCAAATCATCGATCGCTTAGAACGCGAGAAGGATCAGCAAAGAATCTCCAAATATTGTTCCgaatcgcaaaaaatcgattcggaattattgaagttttttcatctcgcGCCCCCACCGGCTAAACCCGGACGCAAGCAGATTTATTACAAGGAAAAAGAGCTGAAAAGTACTACGAGAGTTTTGAATATTCTTCTCCGAACTCTCGATGCCGATCTCGCGATTCCCGGGGAACTCGACGACCGAATTCTCAGCGAGAAGGATAAACAACTGTTGAGTTCTTTGAAGGATTATCAACAGTTGCAGATAGAGTACGCGAAAGTCTCGAGCAAAGCAGTCGAATGCGCAAGAATGAAGCTATTCGGTGACGACAATTGGGGCGAAAGGCATTTCGCGCCTTTGTGCTCCGGGAATTGTAATCCCAAAGAAAAAGTACGAATAAACGAtacaatcgattatcgagagCCGCAGAACTCCGATCTCTGTAGAGTAACGTTAGAAATGCAATTCGATACTCCGAAAATCGTTATCGAATTAATCggcgacgagaaaaacgacgaattcgaTAAACTCAtgaaaatctttcgaattCCCGAAACGAAAAAGCGACCAAATGTTATTGAAACGATTTATGTATTACCGCCGAAAGAAATCTCAATGGATTTGTCGGCGATCGAGACTTTGCCTCGGGATTCGCGAAGCTGCGGAACtaatcgaaaaacgattacCGCGACGAGAAACCAAAAGGAACGCGGCGCCGGTAGAGTCGAATCGCGCGATTGCCGCATCTGGGAGGGAATAATTCATCACGAAGATCAGTACAGCAATTGTATCGCGCCGAGTTATCACACGCTGTTGGGTTTGCAACAcattatttccgaaaaaaaagtttcggagAATTCCGAATTTTCTCGATCCGAACTTCCGACGAGCGAAAAAGCCGCGAGAGCTTTGAAACTTTTCAAGAAACGACTCTTACAGTTGTATAAATATCCGATTCTCTTGTCGAATCTCATTCCGCCGCCGATTTACACTGAAAGTTTTGATAGTACAGCGCTTTTGGATAACCGAACGAACGTTTTCGATGACGACAAAGTTAACGAAGGAGACGCAGCGCCGTCGGGCGCTAAAAGACAACGATTGTCGAACGCTGAAATACTGCGTCCGAAAAATCAACGccgcggaagaagaagaaaatga
Protein Sequence
MIDSEDDSEILDEIRALEDVLAKDEWSTSSSLRNDVTLCNLSSRRLNAPSRGFGEVTPYRESEVVVTDVTVPRTAYETNKKLIELLQEARRELLTILEKCVENKAILEEKIRITAINTKTSKLQIGAAGMPYFKDAKHFFAPRNKDAVTKVQKNELQVVQLRLTCPWTPHDRNILWRAIRQEASTSVLNTGTPDHGESPNQSNNENRQSEVLNLPKNFKSMIGPLDSREFDWLKIAATDFDNRHTPDECRVMWRVFLHPEINRHKWTQAEDKNIEKLSKRYGHQDWEAIAVELGTRRSGYQCFIRYNTNNRSSCFKVDQWTPEEDAKLRRCIEKFQIGHYISWGNVAKYMDGRSKNQVYNRWNAVPNLKKGRFTADEDAKLLEAVAKWGQNFARISEQVMPNRSCAQLSDHYQTLVQREHGVRNSWSVGEDAMLLKLYAKYGSDWSNIAAKLPGKTRTQVRHRHKAILRYWDRGISLYSIRRSYDKSEASNDVVDTQIIDRLEREKDQQRISKYCSESQKIDSELLKFFHLAPPPAKPGRKQIYYKEKELKSTTRVLNILLRTLDADLAIPGELDDRILSEKDKQLLSSLKDYQQLQIEYAKVSSKAVECARMKLFGDDNWGERHFAPLCSGNCNPKEKVRINDTIDYREPQNSDLCRVTLEMQFDTPKIVIELIGDEKNDEFDKLMKIFRIPETKKRPNVIETIYVLPPKEISMDLSAIETLPRDSRSCGTNRKTITATRNQKERGAGRVESRDCRIWEGIIHHEDQYSNCIAPSYHTLLGLQHIISEKKVSENSEFSRSELPTSEKAARALKLFKKRLLQLYKYPILLSNLIPPPIYTESFDSTALLDNRTNVFDDDKVNEGDAAPSGAKRQRLSNAEILRPKNQRRGRRRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00397219;
90% Identity
-
80% Identity
-