Cvid007772.1
Basic Information
- Insect
- Cryptus viduatorius
- Gene Symbol
- -
- Assembly
- GCA_964006125.1
- Location
- OZ023222.1:21540779-21541429[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9 6.2e+03 -2.7 0.0 12 21 22 32 20 32 0.59 2 2 2e-12 1.4e-09 37.9 0.1 2 37 36 72 35 74 0.93
Sequence Information
- Coding Sequence
- ATGAAGTGTGAAGTTGATGGGCATATCTCGAAAATTAACTTTTCCTTAAATAGATACGCGGTGGTTCGAAATCGAAAGCGAACTTCGACGCGACAATCATGGGACCATCACGCCATGGCCAAAGCCATACAAGCGGTCGTAAATAGGGAGATCGGTTATCGAAGAGCATCCGAAGCGTACGGTGTCCCTCAAACAACTTTGGAACTCCGAGTAAAACTATACCTCGAAAATCCGGACGTCGAAATAGCCATTATGAAagGGTTGGGTCCATTTGAATCCATATTCACGCCAGCCCAGGAAAAACAATTAGCTGTTTATTTACAAGAAATGGAGTCTCAATTCCATGGCTTAACTGAGTCGGAATTGAGAGGGTTGGCAGCTTGcagaacaaaataa
- Protein Sequence
- MKCEVDGHISKINFSLNRYAVVRNRKRTSTRQSWDHHAMAKAIQAVVNREIGYRRASEAYGVPQTTLELRVKLYLENPDVEIAIMKGLGPFESIFTPAQEKQLAVYLQEMESQFHGLTESELRGLAACRTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -