Basic Information

Gene Symbol
Onecut2
Assembly
GCA_964006125.1
Location
OZ023226.1:5992388-5994553[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-37 9.1e-34 115.7 0.5 3 78 642 717 640 718 0.97

Sequence Information

Coding Sequence
ATGGAAGGTATAGGGGACATAACCGATCATCGGTCGCATAGCGAGCAATTGTTGGACTCGGTCGATTCTCCGGTTGCGGTCACTACGCATGGCCGGGGTGGCAGTGGGGGCGGGTCGAATGGGAACTGTCGTGGTATCGGGGGCGGCGgtagcagcaacagcagcagcagcagcagcagtagcgcAAGCAGTACGAGTAACATCAGTAGCACCGGTAGCAGTAAAGCCGGCTGCGGCGGCAGTGGCAGTGGCAGTGTTGCTGCTGGAAGCGGCAACGGCTGCGGTAGTAGGGGTGGTAGGGGTTGTAGTGGTATTATCGGTATCGGTAATCCAGTTGGGAGTGTTAGTGTCAGTGGTAACGTTAGCAGCGGCCTCGTCAGTGGTATCCGCACGAGTGGTGGCGTCGCGGGTGGTGGTAGTAGTGGTGGAGGTGGtgctggtggtggtggtggtggtggtggtggtagtAGGTTGCATCGTCACAGAAGAGACCACGAGGTGCGCGGCATTATCACAAGTGGTGGGGGTATCGTGGAGCTCGACGAAGCAGAAACCGAAGTGGtgggaggagaagaagaagcgggAGAAGGAGAAGGAAGTGGAGGAAGCCGTTGTGGAGGTGGCGACGGAGTTGAGGGTGCTTGCATCGCCGAGGGTATGTCATCGTCGGCATCGCAAAGTCCCGACATCGCGTGCGCGAGCCTCCCGCTGGAACTACTCGGGGCTGGCGGGCTCGGCGGCGTCAAGCAGGAGGTGGATCACtaccaacagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagcaacgaggCGGAGGCGGCAACAGTGGAGGTGAGCATCACcatcaccatcatcatcagcagcaacagcagcaacatcagcaacagcagcacctTGCCGCTGTCGTCGCTGCCGCCGCTGCCGAGGATTTGTCATCGTCCCAAGAAACATCGGGGACGATTAGGGCAACGAGCGGTAGAGAAACATTATCGGTTATCGTACCACCCCAAGACGTCGACGTTGATTCGAGGGACGACGCCGATTCCGAACTACTCAGTCCCGGCAAACTTACGCCAACTTCCGGTATCAGTGTCTCGGTTGCTAGTATGATCGACGCTACGGACTTCAGGGCTATGCAGCCCGAGCCTACTTATCAGACCCTGACCTCGGTAGCCGAGAGGATGTCACCGCCTGGTTTCTCACCCGGTTCGTCTTACGCGACTCTAACGCCGTTACAGCCCTTACCACCGATATCGACGATGAGCGACAAATTCGCATATGCCGGACATACCGGTGGCGGTGTATCGGGCAGTTTTGCCGTTATGCAGAACAACGGATTGGGAAATATTGGCCTCGGTATGGGCGGTTCGCCTTACGCTTACGACAAATTACCGTCTATGGGTATGTCGCCGCCGCACAATTATCCGTCGCCCGGTGGTGGATTACAGCCCAGTCCGTTGTCACCCCAAAGTGCATACAGTCAGAGCGGATTAAATTCGCCCCACAAATCTGCTAGTCCCCATTACGAACCGGCTTTTTTACCGCGGTTACAACAAAGTCCGGCCGCCCTCAGTCCACCGTCGCCACCGGTATCGGCGGCTACCAGTTTCGCGCCTTCGCATCATTCCCCACCTACGCTATCGGTACCCGCCGCATCTCCCCCACCGATACAAACCCAAttgcaacagcaacagcaacaacaacagcaacaacaacaacagcaacaacagacCATTCAGCAACAAACGATATCGCACACGCAGCAACATGTTCAGCACACATCGGTCGTCATGAAAACGGTATCGTCTGCTGGAAACGGCGCCGGTGAAGTTGAGGAAATAAATACCAAGGAACTCGCGCAGAGAATAAGCGCCGAGCTGAAGAGATACAGCATACCGCAAGCGATATTCGCGCAGAGGGTATTGTGCCGCAGTCAAGGAACCCTAAGCGATCTTCTGCGCAATCCAAAACCGTGGTCCAAACTCAAGAGCGGCAGGGAAACCTTTCGAAGGATGTGGAAGTGGCTGCAGGAGCCGGAGTTTCAGAGAATGTCGGCGTTGAGAATAGCAggttag
Protein Sequence
MEGIGDITDHRSHSEQLLDSVDSPVAVTTHGRGGSGGGSNGNCRGIGGGGSSNSSSSSSSSASSTSNISSTGSSKAGCGGSGSGSVAAGSGNGCGSRGGRGCSGIIGIGNPVGSVSVSGNVSSGLVSGIRTSGGVAGGGSSGGGGAGGGGGGGGGSRLHRHRRDHEVRGIITSGGGIVELDEAETEVVGGEEEAGEGEGSGGSRCGGGDGVEGACIAEGMSSSASQSPDIACASLPLELLGAGGLGGVKQEVDHYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRGGGGNSGGEHHHHHHHQQQQQQHQQQQHLAAVVAAAAAEDLSSSQETSGTIRATSGRETLSVIVPPQDVDVDSRDDADSELLSPGKLTPTSGISVSVASMIDATDFRAMQPEPTYQTLTSVAERMSPPGFSPGSSYATLTPLQPLPPISTMSDKFAYAGHTGGGVSGSFAVMQNNGLGNIGLGMGGSPYAYDKLPSMGMSPPHNYPSPGGGLQPSPLSPQSAYSQSGLNSPHKSASPHYEPAFLPRLQQSPAALSPPSPPVSAATSFAPSHHSPPTLSVPAASPPPIQTQLQQQQQQQQQQQQQQQQTIQQQTISHTQQHVQHTSVVMKTVSSAGNGAGEVEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRIAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01364421;
90% Identity
iTF_00840842;
80% Identity
-