Basic Information

Gene Symbol
ct
Assembly
GCA_964006125.1
Location
OZ023225.1:21335438-21353187[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 6.6e-24 84.1 0.0 2 72 494 565 493 570 0.95
2 3 2.1e-32 1.2e-28 99.3 0.0 2 77 925 1001 924 1003 0.96
3 3 1.2e-30 6.6e-27 93.7 0.0 3 75 1175 1248 1173 1252 0.95

Sequence Information

Coding Sequence
ATGGTAGATGGACGATCCCAATGTTCAATAACACCAAAGATTTTGATCAGTCAATTGGTCGAGGAGGTGTCGAGGTTACAGCAGAGTCTGCAGCGTCTCCAAGAGACAAGTGCACAGGCGAGCGCTCGATTGGAGGAGGAGCTCGAGGCTCGTAGGCAACACATAACCCGGCTCGAGAGCAAACTCGAACGCCAGCGAGACTACGATGATCTGAAGCGGGAGATAAGCGTCCTCAGATCCGTCGATCTATCGCAAATACCGACGGGGGAGCCCGGCAAGAGCCTCGAACATCTTCTAATGGAACGATCGAAGGCACTTCAGCAGGCCGAAACACTCAAACCACCGAGCACACCCGATGCACTCGGTGGACTAGCCTCACCCCTGCAGCGCGCCGCGACCGCTTCACCCCACGCTGGTGGTGGTGTAGGTGGTGCTGCCGGTGTCGTGACTGGTGGGAGTGCTGCACCGCCACCCGTGTCCCTCGCCACCTCTTCCCAACAAGCAATCCCAACACGCTCGACTCCGACACCCTCGTCGGTTACTTCGACCGCTTCGAGTCTCCTATTCCCTCCGCCTCTCCAAAACGTCGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGACGGTCCCTGGAGAGGTCAATAATGagccagcagcaacagcagcagcatcaacaTCAAGCCCAACAGCAACACCAGCAGCAACAATTGcaccaacagcagcaacaaccaTTATCACAACAATCGCAAACCCAAGTTCTTTCCCAGCTGCAACATTCGCAGCCCGTTGCTATACAGCAAGCTTTGCAACAGCAGCACCAATCAATGCACGCGTTACATCCACCGACGAACCTAAATCACCTTCCATCGCCAACAGATAATCCAACATcgtcatcatcgggatcggttACGAATACACCAGCCAAGTCGAACACGCCGCAATTGGGTGGTAGCACTTTGTTGGCAAGTAGTTGTCTGGACGCGACGGAAAAGGCACCGACACCGATACCGGGTCACGAGACACCAGCACCGCCGACACCATCGTCGACGGTTGCTCTTACATCGCCTACGGCGCCTATGGTTGTCAGCTCCCTTCAACCGCCCCAATCGGTCTCGACAACGATCCTCGATTCGATTCACAACAGCAACAACGTTAACGGCTCCGGCATCGGCATGATGCCGGGTATGCTGCCAACCTCACTTCCGCCAAAGAGCCCGCAGGAGGAATCCTGtcacaataacaacaacagcCATCATCTGGCCAACAACAACATCGGCGGTCTCAGCGTTCTCGACACTCTCAAGAGTCCGTTTCGCTTCGACGATCGAACGCATCCGTTTAGATTCGGTGACGAATTCGGCGCCGCGGGAATGGCTGGCAGACTCGGCGAGTCGCTCATACCAAAGGGCGATCCAATGGAAGCGAGACTCCAAGAAATGCTGCGCTACAACATGGACAAGTACGCGTCCCAGAATCTCGACACCCTGCATATCGCGAGACGCGTTCGCGAATTGCTGTCGATACACAACATCGGACAGAGGCTTTTCGCCAAATACGTTCTTGGCTTGAGCCAAGGCACCGTCAGCGAACTTCTGAGCAAACCCAAGCCATGGGACAAGCTCACGGAGAAGGGACGGGACAGCTACAGGAAGATGCACGGATGGGCTTGCGACGAAAACGCCGTGATGCTACTCAAGTCTCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCAACATTCGGACGAGGTCCACAGGACGGCGGTCCGGCTGACATGAGCGACGAGAGACTGGCGCATATACTCTCGGAATCGGGACACTTGCAGATGAGCCGGGGCGAGCACGACACGTCGAACGACGCTGACAGCAAGAGCCCGAGCAGACTCGGTTGTCCGAGTCCCTTCGGCAAAGATCGTATGGACAGTCAGAACAGGAGATTGAAGAAGTACGAAAACGACGACATTCCCCAGGAAAAGGTTGTGCGAATCTATCAGGAAGAATTGGCCAAACTGATGGGCAGACGCGTCGACGATCTTCGGACTCCTCGAGACTTTCCCCCAAGCGCGATGTTTCCGCATTTTTTCAGCGGGACTCAGGGTCTGCAAGGTCTGCAGGGTCTTCAGGGAATGGAGAGGACACAGGAGGAAATCCGCTTGGCGTTGGACGCGTATCATCGCGAGCTTCAGAAGCACAACGCAACACCGGGTCAGAATTCGGCCGCTTTGGCCGGATTGCCGGGTCTTCCGAGTTTGCCTGGTCTGTTGGCGCTTCAGCAACAAGTACTTCAACAACATCACATGACGACgaacggcggcggcggcggcggcggcggcggtggtggtggtggtggtggtggcggcggCGTCCAGGATCTCAGTTTGGGCAAAGTCGATCCCCGAACGAAAATGATCAACGGTGTTACGGAAGAGGAAAAGGACAAAATGGAGGAAGCGATGAGACACGCCGGAAGCGCGTTCTCGTTGGTCAGACCGAAGCAAGAACCCAGCGGAGCCCAATCGACTCCCGGTGGTTCGAGCGCGAGCTCCCCGCTCGGCAATTCGATTCTTCCACCGGCAATGACGCCAAGCGAAGAATTTTCCGGTGCCGCCGCGGCGAGTCCGCTCCAAAGAATGGCTTCCATAACCAACAGTCTCATTAGCCAACCGTCCACACCGACTCATCATTCGGCGAATCAAAGGCCACTGAAAGCCGTGCTTCCACCGATAACGCAACAACAATTTGACATGTACAACAATCTCAATACCGAAGACATCGTGAAAAGGGTAAAGGAGCAACTCTCGCAGtattcgatttcacagcgtctcTTTGGCGAATCCGTATTGGGTTTGTCGCAGGGTTCGGTGTCGGATCTCCTAGCGCGACCGAAGCCTTGGCACATGCTGACGCAAAAGGGCCGAGAACCTTTCATCAGAATGAAGATGTTCCTCGAGGATGACAACGCTGTGCACAAACTGGTCGCGAGCCAATACAAAATCGCCCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACTCCGATGAAACCGATGCCCCCAACGAAATTGGTCCAAGAGCAATTGCAGAACGCGGCAAAGGCCCAAGCGGCGGCGCAAGCGGCGGCGGTAGCGGCAGCAGCGGCGCAGCATCAACAGGACGCACAGATGCAGTTGGGACCGCCGCAACCGTCACCGCAGCATCAGTCGCATCCGCAACCGCCGCCTCCTATGATGCTCACACCGCCGGGTCATCATCCTCACGCTCAATTGAGCATCCAGGAATTGCAGAAaaagcaacagcaacaacaacaacagcagcaacaacaacaacagcagcagcagcagcagcagcagcaacagcaacaacagatGGGGCTGCACTCGCCGCATCATCAAATGGCGCCGTCGCCGCTTCGCGGTCTTCACCCTCACATTTCGCCGAGCGTCTACGAAATGGCGGCTCTCACACAGGACCTTGACACACAAACGATAACGACCAAGATAAAGGAAGCTCTTCTGGCGAACAACATTGGCCAAAAGATCTTTGGCGAAGCGGTCCTCGGGCTTTCGCAAGGTTCCGTCAGCGAATTGCTCAGCAAACCGAAACCCTGGCACATGTTGAGCATCAAGGGTCGCGAGCCTTTCATAAGAATGCAACTTTGGCTGTCCGATGCGCACAACGTCGACAGACTTCAGGCATTGAAGAACGAGCGAAGAGAGGCGAACAAAAGACGGCGCAGCAGTGGTCCGGGACACGACAACAGTTCCGACACGTCGAGCAACGACACGGCGGAATTTTATCACGCCGCGTCGCCGGGTCCCGGACCACCTTCGGCAAAGAAGCAGAGAGTTCTCTTCTCCGAGGAGCAAAAGGAAGCGCTCAGACTCGCGTTTACTCTCGATCCTTACCCCAACGTTGCGACAATCGAGTTTCTCGCTGCGGAATTAGCGCTATCGTCGAGAACGATAACGAATTGGTTTCACAATCATCGAATGCGACTGAAGCAGCAGACGCCGCACGGTCAACCAGAGCCACAATCGCCGCGGGAACCCGGTCAACCTTTCGATCCTGTCCACTTCAGGCTCTTGCTGAACCAAAGACTACTGGAGATTCACAAAGAAAGACTCGGATTGGGCAACGTCCCGATACCTTACGCTCCGTACTTCAATCCCAATATCGCGACGCTCATGAACAATGCCCTCAAGGAACAATGCTCGGGTTTGGATCTCTCGATGGGTTCGTTGAAGAGAGAACCCAACCAGGAATTCGAGGACGAGGATGACGCGATGAGTAATCTTGGTAGTGAAGATTCCGAAGGTTCGGCGAGTAGCGTCAAGAGAGAATCTACCGATCTCAATCAACCTCCGGCACCGACGACCTCGAGATCGAACAGACGAAAACCCGCTGCACCCCAGTGGGTCAATCCCGAGTGGCAAGAACCACCGAGAACCGGCGACGAGGTCATCATCAACGGTGTCTGCGTTATGCAAACCGACGATTACGGGGTTAAAAGAGAAACCGAAGAGACCGTGAGAGTCGAACCGACACCCGTGCCGGACAGATACGAGGATGACGCTCGGAGCGACGCCTCGTCCGTAGCTTCCGGCAACAATGGACAGGATCGCGAAAGTCCGATACCGAGTCCGAAATCCAATCGTGATAGTCCGGCAACCTCACCGAAACCCCCCTCCTCCCAACAGACTCAACCAAACACCGATgaaaatccgattggcattGTGAAAAACGAACCCGAAGAGACATGGGACTATtag
Protein Sequence
MVDGRSQCSITPKILISQLVEEVSRLQQSLQRLQETSAQASARLEEELEARRQHITRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAETLKPPSTPDALGGLASPLQRAATASPHAGGGVGGAAGVVTGGSAAPPPVSLATSSQQAIPTRSTPTPSSVTSTASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQHQHQAQQQHQQQQLHQQQQQPLSQQSQTQVLSQLQHSQPVAIQQALQQQHQSMHALHPPTNLNHLPSPTDNPTSSSSGSVTNTPAKSNTPQLGGSTLLASSCLDATEKAPTPIPGHETPAPPTPSSTVALTSPTAPMVVSSLQPPQSVSTTILDSIHNSNNVNGSGIGMMPGMLPTSLPPKSPQEESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPTFGRGPQDGGPADMSDERLAHILSESGHLQMSRGEHDTSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRTPRDFPPSAMFPHFFSGTQGLQGLQGLQGMERTQEEIRLALDAYHRELQKHNATPGQNSAALAGLPGLPSLPGLLALQQQVLQQHHMTTNGGGGGGGGGGGGGGGGGGVQDLSLGKVDPRTKMINGVTEEEKDKMEEAMRHAGSAFSLVRPKQEPSGAQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAVAAAAAQHQQDAQMQLGPPQPSPQHQSHPQPPPPMMLTPPGHHPHAQLSIQELQKKQQQQQQQQQQQQQQQQQQQQQQQQQMGLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPPSAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAAELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVHFRLLLNQRLLEIHKERLGLGNVPIPYAPYFNPNIATLMNNALKEQCSGLDLSMGSLKREPNQEFEDEDDAMSNLGSEDSEGSASSVKRESTDLNQPPAPTTSRSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKRETEETVRVEPTPVPDRYEDDARSDASSVASGNNGQDRESPIPSPKSNRDSPATSPKPPSSQQTQPNTDENPIGIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00905317;
80% Identity
iTF_00397958;