Basic Information

Insect: Cryptus armator
Gene Symbol: -
Assembly: GCA_963971235.1
Location: OZ020232.1:3102830-3104763[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0025 0.37 12.4 0.4 1 23 235 257 235 257 0.95

2 8 0.096 14 7.4 0.9 2 23 339 361 339 361 0.77

3 8 9.4e-06 0.0014 20.0 2.3 1 23 371 393 371 393 0.97

4 8 6.6e-05 0.0097 17.3 2.0 2 23 399 420 398 420 0.97

5 8 5.1e-05 0.0076 17.7 0.4 1 23 426 448 426 448 0.93

6 8 0.0016 0.24 13.0 2.2 1 23 454 476 454 476 0.97

7 8 0.00013 0.019 16.4 2.4 1 23 482 504 482 504 0.98

8 8 4.1e-07 6e-05 24.3 0.8 1 23 510 532 510 532 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0025	0.37	12.4	0.4	1	23	235	257	235	257	0.95
2	8	0.096	14	7.4	0.9	2	23	339	361	339	361	0.77
3	8	9.4e-06	0.0014	20.0	2.3	1	23	371	393	371	393	0.97
4	8	6.6e-05	0.0097	17.3	2.0	2	23	399	420	398	420	0.97
5	8	5.1e-05	0.0076	17.7	0.4	1	23	426	448	426	448	0.93
6	8	0.0016	0.24	13.0	2.2	1	23	454	476	454	476	0.97
7	8	0.00013	0.019	16.4	2.4	1	23	482	504	482	504	0.98
8	8	4.1e-07	6e-05	24.3	0.8	1	23	510	532	510	532	0.98

Sequence Information

Coding Sequence: ATGATCGCCCAAAGTGAATCGTTGACCGACAAGTTCGACAATATCTGTCGATTATGCCTCAAAGAGGAAAGTCCGATGTTGTCGATATTCGCGACAACGAGGACCGCAACGGGAGCCCTGGAGGACGAACAACGTTCGATGTTAGCCGCGAGAATAACCTCTATCGCACAGGTTCAGATAAGTCCCGACGATGGATTGCCAGCCTTTGTTTGCCAGGAGTGTCGACGAGAAGTGGACAAGTTCTATGAATTCCGATTACTGGTAGAAATCTCGGATCGAACCCTCAGATCTTGTCAAAGAAGCATAGAGCGGACATCTCGTATTGATAAAAATACAGAATACCAGGAATATGCAACGGAAAGCGAATCACCCGAAGAGGAAACGGATCTATTCTCCGTCAATGCGATACTTGTACCGTCGGCGAGCGGTATGCAGGTATGGCAAATATGCAGCGCGGAAGAAGAGGCCGTAGAGGAGAGCGGCGATCTTTGTCCAAAGATCGAATACAGCGAAGAATTTGAGAATTCTATTCCGGATAAAGTTGaaacgacgatgttcgagcgacGAATCGAGATACAAAGCGACGAAATGAAAAAGACGGATAAAGCGGAGCAATTGtatttttcaacgacaaattccGAACGGATATCCAACTGCGATAGCAACGGAGCGGAAGAGGAGGAAGACTTGCCTCTGGACGAATACGACTGCCAGTTGTGCTTAAAATCCTTTCAGTCACTGGAGGCCCTGAAAAATCACGTCTCGGATCATTTTCTCGGCGACAACAAGAGAATCGTAACTCGCGTTCGCGGAGACGCGGAAATGGTCTCGTTGACGAGTATAGAGGAGAATGCAGCAGCGGTAGAAAAGACAGAAGAGCCGGAAATAGCGAAAGACAATAATCGCTACAGGAATAATGACGATTCGCTGACTTGCCAATCGTGCGACGAGCTTTTCGAGACGATGGAGGAGCGGATACTTCACGGGAGAAGAAACATAAGAGTCAAAGGGCCGAAGTGCCGTTACTGCGGAAAGTCGTTTTTAAAATTATCCTCTCGCAATTATCACGAAGAAAGTATTCACGAGGTGAATCGCGCAATCGTTGTCCATCACAAGTGCGACGATTGCGGGAAAGAATTCGTGAAAAGGTCGGAGCTTAGATATCACAAGGGGACACATACGACTTTACCCTCGACGTGTACCATATGCAACAAAGACTTTCGTAACGCTCAATCGTTCAAAATGCATGTTAAGAGACACACTCTCGGTAGTCGTTACAATTGCATCGAATGTGGAAAGAGTTATTACACGAATTCTGAATTAGCGAGGCACGTGCAACAGCACACCGGCACAAGGGAATATCCTTGCCATCTGTGCGACATGTCGTTTCTCTCGAAACCCGAATTGAATAGACACTTCAAGTATCacaacggtgaaaaaaaattcgagtgcAAGTTGTGTCGCAAGACGTACTACGAATCGGGTCATTTAAAGGTTCACGAACGGGTCCACACCGGCGAAAGACCTTTTTCTTGCACGGTCTGCCAAAAGGCTTTCATCACCAAATCAAAATTAGTTAGACATATAAAAATTCACGATCGCGTTCGAGGAACGAGACGCGTCGACGAGAATACGAATACAAGTGCATCACATTAA
Protein Sequence: MIAQSESLTDKFDNICRLCLKEESPMLSIFATTRTATGALEDEQRSMLAARITSIAQVQISPDDGLPAFVCQECRREVDKFYEFRLLVEISDRTLRSCQRSIERTSRIDKNTEYQEYATESESPEEETDLFSVNAILVPSASGMQVWQICSAEEEAVEESGDLCPKIEYSEEFENSIPDKVETTMFERRIEIQSDEMKKTDKAEQLYFSTTNSERISNCDSNGAEEEEDLPLDEYDCQLCLKSFQSLEALKNHVSDHFLGDNKRIVTRVRGDAEMVSLTSIEENAAAVEKTEEPEIAKDNNRYRNNDDSLTCQSCDELFETMEERILHGRRNIRVKGPKCRYCGKSFLKLSSRNYHEESIHEVNRAIVVHHKCDDCGKEFVKRSELRYHKGTHTTLPSTCTICNKDFRNAQSFKMHVKRHTLGSRYNCIECGKSYYTNSELARHVQQHTGTREYPCHLCDMSFLSKPELNRHFKYHNGEKKFECKLCRKTYYESGHLKVHERVHTGERPFSCTVCQKAFITKSKLVRHIKIHDRVRGTRRVDENTNTSASH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00398360;
90% Identity: -
80% Identity: -