Basic Information

Insect: Cryptus armator
Gene Symbol: Clamp_1
Assembly: GCA_963971235.1
Location: OZ020236.1:15478911-15484222[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00036 0.054 15.0 3.1 1 23 211 233 211 233 0.97

2 8 0.00019 0.029 15.9 0.4 1 23 264 287 264 287 0.93

3 8 0.0001 0.015 16.8 2.6 1 23 386 408 386 408 0.97

4 8 1.4e-05 0.002 19.5 0.1 1 23 414 436 414 436 0.98

5 8 2.4e-06 0.00036 21.9 1.7 1 23 442 464 442 464 0.98

6 8 5.1e-07 7.6e-05 24.0 1.9 1 23 470 492 470 492 0.99

7 8 1.9e-05 0.0028 19.0 1.5 1 23 498 520 498 520 0.98

8 8 5.1e-05 0.0075 17.7 0.6 1 23 526 548 526 548 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00036	0.054	15.0	3.1	1	23	211	233	211	233	0.97
2	8	0.00019	0.029	15.9	0.4	1	23	264	287	264	287	0.93
3	8	0.0001	0.015	16.8	2.6	1	23	386	408	386	408	0.97
4	8	1.4e-05	0.002	19.5	0.1	1	23	414	436	414	436	0.98
5	8	2.4e-06	0.00036	21.9	1.7	1	23	442	464	442	464	0.98
6	8	5.1e-07	7.6e-05	24.0	1.9	1	23	470	492	470	492	0.99
7	8	1.9e-05	0.0028	19.0	1.5	1	23	498	520	498	520	0.98
8	8	5.1e-05	0.0075	17.7	0.6	1	23	526	548	526	548	0.97

Sequence Information

Coding Sequence: ATGGCCCTAGAATCAAATGGTAACAACGTGGTGTGGTTGAACGCAACCCGACCTGATCAAATACAGCAGCACGTAGCGAAAGACGATCCGCAAGCAATCGAAGGGAGCGAAGAACAACGACACcttcaacagcagcagcagacgcAGCATCAGCACCGATATCAGAGAAACGCCATCAAAATACCCAATCAGCAAAACCAGCAGGTAGAACAGCCGGTTAAGTGTTCTATGTTCACGCAGACGGAACCTACGAATAGTTTTGTTCAAACGGAACAGAGTAATTCCAGTTACGCAGATCAACGTCAGACTCAGCAACAAGCTACGATGTTTGATCCGCAACAAATACAGCAGCAGCAGGCCGCTCAGAGCCAACAGACGCAGCAACAACAGTCACAGCAGATGTACGTTACAACGGAGAAAAAAGAGGACAAAACTCAGCAGCAGACAGCAGCAACGGAGTTTCCTTACTTCTACAACGTCAACATGCTACAGAAGGTTCAAACAAACGCGGTGAGCACAATCGGTGCGATCACAACCGACGACAAGGGTTGCTACCGTTTCGATGTGCAACCTGTCGGTTATAACGCATTACTGAATCAGATGAGCATAGCGGCCGCGACGTCTGCGACCTTCAAGTGCGACCTTTGCGGCTTGGTATTTGGCCACATGAGTTTGCTGAATCATCATAAAAAGCTTCACAATACATCGCCCAGCAATCTTCAACAACCGCAACAAGTTGTTGTACAAACACCGACAACGGTCACCGTCACTACGACGCCGGAGAGGCCGTACACGTGCGACATATGCGGAGCGTGCTTCGCCTTACCCGGCGAATTAAAAAGTCACAAGACAAATATGCATCAAAAACCGAAAGTTCAACTTTGCGAGGATTGCGGCAGCGAGGATCCCTGCGAACATCATCCGACCAAAGTTAAAAAGACAATCAAACCCGGTCATCATCCGGTAAAACGAAGGGGCGTCACGAGCGTAACGAAGTGCCACAAATGTAACGGAACTGGAATCATATTTATCGGTAAAGACGACGAAAAACTAGATTCTGGAATCAGTTCCCTTGCGAAGTGTGGCGGCTGCAAGGCAACAGGCCGTATCATCATAGGAAGCGGGAAGCAAAATCAGAACCAGCCGGAGAAGCCGTTTCATTGTAACGTTTGCGACGGCACTTTTTCCCGATACTCGTCGCTCTGGTCCCACAAGAGACTTCACTCTGGGGATAAACCATTCAAGTGCGAAGTCTGTGGTTTGGCCTTTGCGAAGGCGGCCTATTTGAAAAATCACGGACGCGTTCATACCGGTGAAAAACCATTCAAGTGCAGCGTGTGCGGTATGCAATTCTCTCAGAGCCCTCATCTCAAGAATCACGAAAGAATTCACTCGGGCGAACGTCCGTATCAGTGCGAAGTTTGTGAAAAAACATTTGCGAGACACTCGACGCTGTGGAATCATCGAAGAATTCACACCGGCGAAAAACCGTATCGTTGCAACACATGCGGCTCGGCGTTCAATCAAGCGACGCATCTTAAAAATCACGCTAAAGTTCACACCGGTGAAAAGCCACACAGATGCGACATATGCGAAATTGGTTTCTCGGACCGTTTCGCTCTGAAGCGTCATCGAGCCATTCACGAAAAGTACGGACAAACGGCGCGTAATCAGAACGCTAATAGTGCGACAAATGCGCAACAGGCGAATACTAGTaatcaacaacaacagcagcaacacgatcagcagcagcaacaacagcagcaacagcaacaacaacagcagcaacagcaacagcagcagcagcagcaacaacaacagcagcaacagacTCAACAGCCTCAACAGGGGCAACAAGTCGTCGTAGTTAACGCCACAACACCGGTGACCGTTAGTCAGGGTCAGGGACAGGCGGTAATGCTTGACGAGGTCTACAAATGCCAAGTGGCCTTCCCGGAGCCTAAATGA
Protein Sequence: MALESNGNNVVWLNATRPDQIQQHVAKDDPQAIEGSEEQRHLQQQQQTQHQHRYQRNAIKIPNQQNQQVEQPVKCSMFTQTEPTNSFVQTEQSNSSYADQRQTQQQATMFDPQQIQQQQAAQSQQTQQQQSQQMYVTTEKKEDKTQQQTAATEFPYFYNVNMLQKVQTNAVSTIGAITTDDKGCYRFDVQPVGYNALLNQMSIAAATSATFKCDLCGLVFGHMSLLNHHKKLHNTSPSNLQQPQQVVVQTPTTVTVTTTPERPYTCDICGACFALPGELKSHKTNMHQKPKVQLCEDCGSEDPCEHHPTKVKKTIKPGHHPVKRRGVTSVTKCHKCNGTGIIFIGKDDEKLDSGISSLAKCGGCKATGRIIIGSGKQNQNQPEKPFHCNVCDGTFSRYSSLWSHKRLHSGDKPFKCEVCGLAFAKAAYLKNHGRVHTGEKPFKCSVCGMQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNTCGSAFNQATHLKNHAKVHTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTARNQNANSATNAQQANTSNQQQQQQHDQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQQPQQGQQVVVVNATTPVTVSQGQGQAVMLDEVYKCQVAFPEPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01514338;
90% Identity: iTF_01057140;
80% Identity: iTF_00398347;