Basic Information

Gene Symbol
ZFX
Assembly
GCA_963971235.1
Location
OZ020242.1:6946586-6948675[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.69 1e+02 4.7 1.0 1 19 199 217 199 223 0.92
2 11 0.00088 0.13 13.8 0.1 1 23 293 315 293 315 0.94
3 11 0.0045 0.66 11.6 2.6 1 23 321 343 321 343 0.92
4 11 2.4e-06 0.00035 21.9 0.3 1 23 348 370 348 370 0.99
5 11 2.4e-05 0.0035 18.7 0.1 1 23 376 398 376 398 0.98
6 11 7.3e-07 0.00011 23.5 1.1 1 23 404 426 404 426 0.98
7 11 4.1e-05 0.006 18.0 0.3 1 23 433 455 433 455 0.95
8 11 0.00012 0.018 16.5 1.2 2 23 462 484 462 484 0.97
9 11 6.1e-05 0.009 17.5 2.5 1 23 490 512 490 512 0.98
10 11 8.5e-05 0.013 17.0 2.2 1 23 518 541 518 541 0.93
11 11 0.00049 0.073 14.6 0.8 1 23 573 596 573 596 0.96

Sequence Information

Coding Sequence
atgaacaaaaataaaagcgattGTGACAAATGTCGGTTATGTTTAGTCGTCGGTGACAAGAACGATTTTACACCGATATTcgatgacaacgatgaatcTGGTGCGTCGTTAGCCGTGAGGATAATGGTCTGTTTATCGCTTCCCATTCAACCGAAAGACTCGTTTCCCCGAAACGTTTGCAAAAGTTGCGACCAACGTGTGACCGATTTTTACGCGTTCAGAGAAATTTGCTATAATTCGTATTACACGCTGCTGCGAGCCGAAACGTCGTACGacgccggaaaaaaaaatttcaccgacGACGATGAGGGCAATACGACGTCTGGACACATCAGTAACGGAGTTGACGACGTTGAGGAAGAAACGGAACCCAATGCATTCCCCGCAGTTTCAAGGTTGGAAAAAATTGATCGTCACTCCGAGGATAATACACAAATGACATCCGTCATAATCTCGGATAATGACGACGTAtcagagcaaaaaaaattacaaaccgATTACGTCGCGGAAGAGACGATATCACACGGCGTagagaacgaggaaaaaaattcgGAAGAAACAAATTTTGACGATGACGACGCCAGAGACGTCAAATACAAGTGTTTGGCGTGTGACGAGGTATTTGCAGATTTGGACAGTGCGACGATTCACTGTGCCGTGTGTTCACACGCCGTTGTTGATGACGACCAATCAGAAACTATTGAATATCTTGACGACAGTTACAAAGATGATAGCGAAAAATTAGAAGAAACAGATAAATTGTTGACAGCcacattaaataataaaaataaattcgaaattagggacgtaaaaaaaagaaaaagcgaatCATCGTCGTCGATTCGAAAGCGCAAAATAAACGATAAGAATTCTAGTCATTCGTGCGGCAATTGCGACGGAGTTTTCTCGAGCGCAGCATTGTTGCGCAGACACGCGGTGGTTCACACGGGCGAACGTCCGTTCGAATGTTCGATAtgtaaaaaacgtttttcccaAGTTGGCCAAttgaattttcacaaaaaatttcACGTTAATCCGCGTTATCGTTGCGATGTTTGCGACAAGCCGTTTTTGCGACCGAGCGACATAGAAAAACACATGAGAACTCACACCGGTGAGAAACCTTACGTGTGCAACGTGTGCGCAAAATCGTTCGCGCAATTAGTAGCTTTACAACAACACGAGAGAATTCACACGGGCGACAAACCTTACGATTGCGAGATATGCGGCAAAAGATTTTCGCAAAAGGCGAACAAAACGAAGCACTTAAAGATACACAAGGAAGGCGCGAAGCCTCACACGTGCGAAATATGCGGACGCAGTTTTTCCGATCTCGAGGAGATGAATCTTCATCGCGCGGGACACGGTGGGGGAAAACCTCGAAAATGCAATTATTGCGACGAAAGGTTTCGCAAAATGTCCGAATTGGGACAACACGTTAGACGTTATCACACGTTCGAGAGACCGCACAAGTGTGCCTTCTGCCAGAAGGCATTTTATTCGCTGTACAATTTGAAACAACACGTTATGGTGCACACGGGTCAAAAGCCTTACGCTTGTTCACGATGCGATTTAAAATTCACGCAAAAGGGCAATCTTACGAAGCACTTCGATCGCAAGCACGTGGACAAGTATAGCGTTGTTACCGACGGTAGAGATAGTAATAACGATGAAATTTCGATATCGGACGATAAATCGACggaaacgaataatttttacGCGTGTACGCGGTGCGACCTGATATTTAAAGAGAGAGAAAACTTGATGGACCATTATCAGCGCAAACACGGTGACTGCAagacgaataaaattaaatatatcgTTATTAAGAGACATGAGATGAGCGAAGCGAAGGAAGGAGTTTTTTTATTGGCCGATACTACTCTGTCGGAATGTATCGACGATCCGTTGTTAATCGAACGCGAGGAGAGTATTCAAGTTGTAATGGGAGAGGAAAATGTTCATCACAGTAATCTACAAATATACGACATAGCTgaatga
Protein Sequence
MNKNKSDCDKCRLCLVVGDKNDFTPIFDDNDESGASLAVRIMVCLSLPIQPKDSFPRNVCKSCDQRVTDFYAFREICYNSYYTLLRAETSYDAGKKNFTDDDEGNTTSGHISNGVDDVEEETEPNAFPAVSRLEKIDRHSEDNTQMTSVIISDNDDVSEQKKLQTDYVAEETISHGVENEEKNSEETNFDDDDARDVKYKCLACDEVFADLDSATIHCAVCSHAVVDDDQSETIEYLDDSYKDDSEKLEETDKLLTATLNNKNKFEIRDVKKRKSESSSSIRKRKINDKNSSHSCGNCDGVFSSAALLRRHAVVHTGERPFECSICKKRFSQVGQLNFHKKFHVNPRYRCDVCDKPFLRPSDIEKHMRTHTGEKPYVCNVCAKSFAQLVALQQHERIHTGDKPYDCEICGKRFSQKANKTKHLKIHKEGAKPHTCEICGRSFSDLEEMNLHRAGHGGGKPRKCNYCDERFRKMSELGQHVRRYHTFERPHKCAFCQKAFYSLYNLKQHVMVHTGQKPYACSRCDLKFTQKGNLTKHFDRKHVDKYSVVTDGRDSNNDEISISDDKSTETNNFYACTRCDLIFKERENLMDHYQRKHGDCKTNKIKYIVIKRHEMSEAKEGVFLLADTTLSECIDDPLLIEREESIQVVMGEENVHHSNLQIYDIAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00398306;
90% Identity
iTF_00398306;
80% Identity
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