Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_963971235.1
Location
OZ020236.1:1247-2650[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-12 1.7e-08 35.4 0.6 4 43 11 52 9 53 0.94
2 2 0.32 6.1e+02 1.7 0.2 4 13 64 73 63 77 0.89

Sequence Information

Coding Sequence
atgccgCGTGTCATGATAAACGGACTGGTTTGGTGCAAAAATGAggataaaatgttgaaaacgaCTGTAAAGAAACACGAAGGAGAAAATCAGTGGGATCTCGTTGCTTCGTTACTGAGTGGAAAAACAGATACGCAGTGCAAAGCGCGTTGGGCCACGGGCGTCGATCCGAGCGTAAAAACAATCCACTGGACTagagaagaaaatgaaaaattaatgtatctTGAAAAAATAATGAGCAATAAAAGAGATACTACTGCTCCAATGATCGAACATCCTACCGACGAGTATATCGGCGGATATAATTATTCATgGTACAAAGGGCGAAAAGAAACGGAAAAGACGACAGCGGCCAATAACAACCCAGAGAGCTTCGATTCTCCGAGGAGTGAAGCAGCAGCGCCGCCGCGAACTACTACACTTGAAATAAGccgagaaaaggaagaaaattATCCGGAAATACTGGCGGAGCAAGCGCGGCTAAGACTCGCGAATACgcggagtaaaaaaaagaagcgttTCGCCCGAGAGAAAGAAATGGCCGTTATTCGTCGTTTGAAGCATCATCGACGTATGATAGAGAAGAAAAGAAGCGAGCGCAAGAGAAGCGCAACGCAACGAACCGATACGTCTTTTTACGACTCatcgacgacggcgacgacggcgacgacgacgacgacgacgaagcgcACAGTGATGATGGAcgattcacgatttttcgaggAAGCGATCGAGAGGCGTAGAGAAAATGATGACGTTGCAATCGAGTCGCTCGATAACGATGAGACATCGAAGAAACGAAGCAAAGTACTCGTTGTCCCGGTACCGCAATACTCTTATCACAGCTTGCACGCTTTCCATTTTGCAACGACAAATTATCAAATATTTCGACGATGCGACGACGTGTGTAAcattgacgaaaaataa
Protein Sequence
MPRVMINGLVWCKNEDKMLKTTVKKHEGENQWDLVASLLSGKTDTQCKARWATGVDPSVKTIHWTREENEKLMYLEKIMSNKRDTTAPMIEHPTDEYIGGYNYSWYKGRKETEKTTAANNNPESFDSPRSEAAAPPRTTTLEISREKEENYPEILAEQARLRLANTRSKKKKRFAREKEMAVIRRLKHHRRMIEKKRSERKRSATQRTDTSFYDSSTTATTATTTTTTKRTVMMDDSRFFEEAIERRRENDDVAIESLDNDETSKKRSKVLVVPVPQYSYHSLHAFHFATTNYQIFRRCDDVCNIDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-