Carm022581.1
Basic Information
- Insect
- Cryptus armator
- Gene Symbol
- KBTBD4
- Assembly
- GCA_963971235.1
- Location
- OZ020234.1:6430442-6432608[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-06 0.0047 17.7 0.0 3 42 257 296 255 299 0.84 2 4 1.1e-14 1.3e-11 45.0 0.0 2 39 306 342 305 349 0.86 3 4 0.0035 4.3 8.2 0.0 7 34 363 389 359 395 0.86 4 4 2.8e-10 3.4e-07 30.9 0.2 4 39 420 455 417 460 0.93
Sequence Information
- Coding Sequence
- ATGTCGATTTACCCTCTTTTCGCAATTTCATTGTCGCAGACAACGCGGAAGAAGGTCGTGCGTTCCGAGATACTTAGTCCCGTTCCAAGTTCCTGTGCGCGTTCTCTCGCATTGGtaaaagttaaaaaagaaacgatactGGAAACTTACATGTCTTCAATAGGAGCGTGCAGTCAGCCTCCGATCGAGGAGAGCTATTGTTTCAAATGGAGCGATTATCAGAATCACTTGTCGGGAGTTGTTCGTCAACTTCTGGAGGAGGAATGCATGGTCGACGTGACCCTCGTTGCCGCTGGGGAACGCATACACGCCCATCGAATCGTACTTTGCTCATGCAGTACTTTGTTTCAAGAATTATTGAGTCAGGTAACCGAGGATCATCCGACGATAATATTGAGCGATATATCTGCCCAGGATGTGAGATCGATTGTAGAATTCAGTTATCACGGGGAAGTTAGAATTCCTGTTGAGAACATTAGCAATTTGTTGGAAGCCGCGCACTCTTTGAAAATATGCGGACTTATGGAGATCGATGGACTCGACGAGAATGACGCTATTATAAGCACGAAAGACGCGAGTGAAGACACTGCAGATTCTCTGGCTGATTTCAATGACTCTGATGGAAAGGGATCCGAGCAAATGGAAGATACAATTACTGACAGAGATGAGGAAAAGAGTTCTGAAATAATAGACAAGCATCACAACATTGTATCcgttaacaaaaaaagaaaacgcagaAAAGACTCTGTGAAACGGGAATACAACGACGATATGCTTGTATCGGCGATAAACGACTTGCGATCGGGTCAAACGCTTATAGAAGcggcgacgaaaaataatataccACGATCAACGCTGTACATGAGAGCCAAAGCATTAGGAATACAATTGAGCGCATCGCGTAACGAGTATCCGCCGGAATGCATGAAAGCCGCGATTGAGGCGGTCGTCGGAGGTTTAAGTTTGCAGCAAGCGTCGGATAAATTTGATATACCGAAAACAGTTCTCTGGCGAAGAATACAGAAGGAAGGCTATCAGATATTGCGTACAGAGATGAAGCGTTCTTACGGATCGGAGAAGCGTGAAGCGGCGGTAAAAGCGCTGCAACGAGGTGAAAATCTCTCAAAAGTTGCGATGGAATTTCAGataccaAAAACGACGCTATTTCGCGATAAAGCGCGACTCGTAGATGAGGGGAAATTGCCGGAGTCCTTCTGGAAGAAAAGAAAGACCGGCGACGAGCATGTGAAACGCTTGCGTCTCGAGGAAGCAGTGGCGGCGTGTAAAGGCGGAAGAATGTCGCAGGCAGCTGCATCGATGGCATATCGAATACCAAAAACAACGATCTGGCGACGACTCCAACAGGAAGGAAAAAATTCCGAACGCTCCGCAAGTTTGAAGGATACGGAGCCTGAGGAAGAAATCGACGGCGATaaaagcgatcaacaaaattccGATTTCTCATTCTGCGAGGTATCCTCGGAAATCCCTATAACTTATATAGACGAAAACATACCGGAGAATTCCGTAATAATTCTGACGACCCAAGACGTCGACGGACTCAATCTCGAAGCAGGCAGACAAATAATCGTGAATCAAGAATCCGGACAGGAGTACGTTCGATGCGCACTTAGCATAGGAGAAAACACTGATACAACGGACTATCAATCAGCCGAAAGCTAG
- Protein Sequence
- MSIYPLFAISLSQTTRKKVVRSEILSPVPSSCARSLALVKVKKETILETYMSSIGACSQPPIEESYCFKWSDYQNHLSGVVRQLLEEECMVDVTLVAAGERIHAHRIVLCSCSTLFQELLSQVTEDHPTIILSDISAQDVRSIVEFSYHGEVRIPVENISNLLEAAHSLKICGLMEIDGLDENDAIISTKDASEDTADSLADFNDSDGKGSEQMEDTITDRDEEKSSEIIDKHHNIVSVNKKRKRRKDSVKREYNDDMLVSAINDLRSGQTLIEAATKNNIPRSTLYMRAKALGIQLSASRNEYPPECMKAAIEAVVGGLSLQQASDKFDIPKTVLWRRIQKEGYQILRTEMKRSYGSEKREAAVKALQRGENLSKVAMEFQIPKTTLFRDKARLVDEGKLPESFWKKRKTGDEHVKRLRLEEAVAACKGGRMSQAAASMAYRIPKTTIWRRLQQEGKNSERSASLKDTEPEEEIDGDKSDQQNSDFSFCEVSSEIPITYIDENIPENSVIILTTQDVDGLNLEAGRQIIVNQESGQEYVRCALSIGENTDTTDYQSAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397441;
- 90% Identity
- iTF_00397441;
- 80% Identity
- iTF_00397441;