Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963971235.1
Location
OZ020239.1:5114654-5122694[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.9e-27 2.2e-23 83.5 0.1 1 89 307 394 307 394 0.94

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCGCCGTATCTCTCCGTCGGCACGGAGGTAAGCGCCAAATATAAGGGTGCTTTCTGCGAAGCAAAAATCAGAAAGGTCGTGCGCTCCGTCAAGTGCAGAGTGACGTACAAACAAGGATTGGGAACGGCGACTGTGACGGATGATCAGATAAAAGGAACACTGAGAGTCGGCGCGTCGGTGGAGGCAAAGCATACAGACAGAAAAGAATTCATCGAAGCAACGATAACGAAGATCCAGGACTGCAGTCAGTACACCGTAGTTTTTGACGATGGAGACATAACGACATTGCGAAGAACGGCTCTTTGTCTTAAGAGCGGACGACATTTTGCGGAGAGTGAAACTCTCGATCAGTTGCCGTTGACGCATCCTGAACATTTCGGAAATCCGGTTATCGGAGGAAGACGCGGCAGACGATCGAGGCAAGCGCAaGATGACAGTAGCGAGGACGAGGGAAGTCCGCCGCGGGGGAGTCGCGACTCCGGATCGGGAATCGGCGGCAAGGAGGGCGTCGAAACTGAACCGGAGATCGGTCGGGTCGTTTGCGTCGAATTGGGcgataagaagaaaaaggatTATTGGTTTCCGGGACTCGTCGTCGCTCCGACGGCTCAGGATACCGTGCGGATTCGAGTGCGCGATGATTATCTCGTCCGATCGTTCAAAGACGCGCGATATTACACGGTACCGAAGAAGGAAGCTACCGAGTTCACGAAGGAAATGGGTAATAAAGTTGAGAACAGCGCGTTGAAAGTCGCGGTCGAGAAAGCGTTGTTGTTCTTAGAGAAGAACGAGTTGCCGCCGCATTGGGACAGAGATTCGCTTTTCGGTAACGCTGTGTCGAGTGGAAACAGCGACTCGGATGCCGATCTCGATTCGGACAGTTCGGACGACGAGCCGCGCGAGGAGAAAGATCACTTTGTAGCGCAGCTGTACAAATTCATGGACGACCGCGGCACGCCGATAAACAATTGTCCGATGATCGGACAAGAAGATATAGATCTCTATCGTTTATTCCGCGCCGTCTACAAACTCGGTGGTTACAATCGCGTAACGAATCAAAATCAATGGAAATCGATAACGCGACGTTTGAATTTCGCGATGTTGACGGCACCCCCAACGTACACTCTCGTGAAACAGGCGTACAAAAAATTTCTACACTCATTCGAGGATTTTTACAGAAAGTTGGGTTGCACAATGGTGAATCATCCGCGCGGAAGTACGAGAAAGCAACGACCGGGACGAAGTCTGATAAGAGACAAAGATCGAAATACTCCGGTACCGACGGCAACGCAGGCGACAACGCCGGTTCCGAAAGCGACGAACGATCGCGAGAAGATCGAAGCGGAGGAGGAGCCGAAAGTTGTCGTCGAggaggagaagaaagaaaaacaccGAGCGGAACCGGTGCCTCCGGTACCGGCTGTTAAAGAACCCATCAAAGAGGAGGAACCCGTGagaccaacaaagaagaaagaAGTACCGGAAGAGCCGATAAGCGGTCAGGAAAGCGACGTCAACGTCGAAGCCGAAGGTGGCGAATCATCGAGTAGCGAAAAGTCTCAAAAACCTTTAGCGCGTTTTACTCCCGTACCGTCGAATCGCTCAAAGTCATTGAGCAAAACGCGCgacgaaacgaagaagaagagtcaCGAGAAGAGGAAAGCGCAAGATCCGGGAACTTCCTCCGCGGTATCAGCGTCCACGACGACTCCAACTTCGAGTCTCAGCGCTTCGGCAACGATCACCTCATCCTCGACGCCAACGGCGCAAGTATCAACTTCGGCGAAGCGACAGGATGGAACATCGCGGCGCGAAGACAAATCGAAAGACGAAGAGCCGACGAAGACGCGTTCGAAGTCAAAAGACGACGCGACCAAAGCGAAAGCCAATGTCGTCGAAGCGGCGCGTGAGACACGAACGCCGTCCCGAGAATCCGAGAAAACTCGCGCCAATCCGACGAAACAACGTCGCATGACCGACGAAGAGTTGAAAAAACAACAGCGCGGTCGCAAGAAACGCGACAACGAGGCGGAAAAATCGCGTCCCGAAAAAGACGAAAACAGCGGCGTCGAGAGCGCAGCCTCGGCGCCGACTTACAAAGGTCCCGTGGAACTCGGCGATCGATTAAAGGTTTACTACGGACCGACTCACGAGTCGAAAGTAACATACGAGGCGAAGGTAATCGACATCGAGAAGGACGGTAACGGCGAACCGGCGTATCTCGTTCACTACACCGGTTGGAATACGCGATACGACGAGTGGATCAAAGGCACGAGAATAGCGCAAAATTTCACTCAATCGCAGAGTCGGATAAAACGAACGAAAGCGACTCCGAGACCTCAGACACCGAGCGCCGGGGGTTCGGGCGTTAAATCGTCGAAAGGATCGTCCGGTGTCGCGGGAGCGAACGCCTCCGCTTCGCAGAGTCGTCGAAGAGCTCATCAGAACGTCGGTGGATCGGCGTCGTTACCGGTGACGAGCGCTGTATCTTCCTCGGCGAACGCATCGTCGAGTACAAGTTCGTCGAGtggttcgtcgtcatccacagCGGGTAAAGACAAAGAATCGTCTCAACCGGCGCGATCGACGACACCGTTGTCGGTCGCGAGTTCGAGTTCGCGAACCAAAAGTCCCGCGACACCGGCGACTTCGAATCGTCCGACGAGAAACACGCGAAACGCCGAACACGGCGTTGAATTACGCAGGCAAACGCGACGGATGTCGAGTCGCATGGATCTCGTACTCTACTGCACGGAGAGCGACGATAGCGAACCCTACGAGGTCGTCGAGgagcaacgacgacgaagagtttACAGACGACGAGCCGACGATAGAATGAAAGCCGACGAGAACAGCGATGTGGAAGAAGACGAGAAGGACGTCGTCGAGGAACCGCGGAGAACTCGTAGATTGCGGAGAAACGTCGTTAAAGTTAAAGATGCGAAATCCGCGCCGAACGACGGAggaatcgacgacgacgaggaggaagaagaagccgACGATGACGAGGACGACGCCGACGAGGAAGACGATCCCGACGAAGTCGAGGAtatcgacgacgacgccgaaAGCGAATCGCCGCAATCGAAAGTTTCTCCGGTACCGAGCGGCGCTGTGGCGACAAATTTCGTTGCCTCCGCGGAAAAAGAAAGTACCAATGCCCCGGCGACTTACGATCGATCGCACGAGCGTCACGACGAACAGCCGAAGGGCCGCGATTTCGATTTGAATCAAATACGTTCGGAATTAAAGGGTTTCGACAAAGCGGTGAAATTGGAACTCGTGAAATTCGAGACCGACGAACCCGGCGATGTAACGATTAAATCCGAATTTCCACAGGAATTGGAGAAAAAaccgaaggaagaaaaaaaattggatgtcTCGAAAATCGAATTTCCGGTGGATACGAAACCGGTTTTGGATAGTACCGAGGATATATATGAGTTTAAGGAACCCGAACCCTTCGAGTTTGAGGTGCGAAACAAACGCGAATCTAATGTCGATaaggaaaaatcgaagaaacgcgTCTTCGACGAGGAACCGAAGAGTCcgaagaaaaagcaaaaaacgaCGGTAAACGCGACACCGAAGGATAACAAAACGGATGTCGAGACTGTGGATCGAAGGAAAGTCCGTAGAACTCCGGCGAAAAAGATCGATGATAATGTCGATTCGACGATTTCGATCAACAAATCCGCGTCCGCAGTTTCGTCGAAGGAACAGCAGGAAAAATCTAACGAATCGTTGAATCAACCGAAACCTTTGCCAACGCCACCGCCTCCGTTACCACCGCCGCCTCCGCCACCACCACCGCCTCCTCCACCACCCGTTACCGAGGAACAAACGAAATCGGGAGCGAATCTCGATCTCCTCTTCACGGATCTGCCGGgtaacaacgacgacaacgccGCGGACGCCGACGATCCGGAGGACCGTTTGATTATCTCGGAAACCGAAGTATCGGAGACGGAACAAGAGAGTATCTTTACATATCAGCAAGAAATCTTTGCGTCCAACGATATGCCCGATAGAATGGAATTCACCGCCGGTACGAGCGAATCTACCAAAGCCACGAAAATCGCCGTTCCAACAACGACTTCCGGTGTCGTTGTTTCGATTGCGACGACGACATTGCCATCGTCCGCGTCGTTAATAGAACGCAAGTCTCTCGACGTCGCGCGACCGACGAGTTCGATATCCTCGAGTtccacgacgacgatgacgatgccGGCGCCGATAAGCGCGAGACTTCCGGCGACTTCGACGATAGAGGAAAAATTATCAGCCGCCGCATTAGCGTTTCGTCAGGTGAGATCCAAGGAAACAAAACGCGACGACGACTCCGCTGAAGTGACGAAAAAATGCGGCAAAGAAGGTTCTCACAAGAAATCCGAATCCGCCGCATCGAAGAGAAACAAAGCGGCAATCGAAGAACAGGCGAAAGCAAAGTTCGAAGCCGAAGCATCGAGAAAACGCGAGAGTAGCGGTGAGGAAGTTACGAAACAGGATGAGGAGAGATTCCGCGAGGTGATGCGAGCGGTTATAAAGCAAAAGGAAGAAGAATTAGAACAATTGAAGTTGCAGAAGGAAGCGGAATTGAAGAAAATCGCTGAAGCAAAGGCGACAGCGGAGAATCGAAAGGGTATCGAGAAGAGAAgtggcagcggcggcggcgacgacgaTTGGAGTAAACGAAAGGCTCACGAGGCGCAAACGGAGTTCGGAAGAGCATTGAGCGACGCATCGGCGTCTCCGCGCGACGATGAACCGCACAAGGAGAACGTCGAGAGACAGCGAGACAAGCGAAAGAAGGTGATAAGTCAGGAATTCGTTGATTCAACGGACAGCAGCGATTCGGAGCAAAAATTAGTTATCGACGCGGTAGCCGAGGGACGCGAAGATAAAAATGAAACGTCCAATTTCGATGCGAAACTCAAAGCAGAACTCGAATTACTGCAACAAGATTCTCAACAGCAGGAGAACCGCGAAGCAACGAATTCGACGCGTTCGAACGCTCAACAGAATCTTAGCATTCGCGTTATACAGCAACAATCGAGTTTAACGGTTACGAAACTCGCGACGAGTACGAAATCCGAGGAAGAAGGAGAGAACATGAGTTCGTTGCTCTGCGAGGAGGAAATACCGGGTTCACCGGCTCCGGGACCCGACACCACCGATCAGGATGGCAATGGCGAAAATCGCATCGTACCGAAGGACGAGAGGGGAGAGAAGAAAATGGTTCTTCTTGAAATGCCCTTCGCTAGCGCGCCGACTTCCGGTGCTCAGAGCAGCACTACCAGCGGCGTTAGCGTCGGATCTAACATCGGAACGATTTCCAACAGTTGCAACGTTCCCGTCTCTGTAGCTTTGCAAattcagcaacagcaacagcaacaacaacagcaacaagcTGTAGGGGTTTCGGGATCGAGACATCAAATGctacagcaacagcaacaattaCCCGGACCAATGGCACCGCAGAGACGCGAGAGCAACGAAGCCGCTCCGGTTATGGATAATACACCGCCAACGACACCGGATTCCACGATATCCAATATTTCCGGATCGCCGAGGGAAGAGGAGAGAACCGGCGTTTCGTCGCCGTTGTCCGAGGAAAATGTTAAGTCTCACAGAGACAGTTCCGAGGCGGATAACGATAGCGGTGGAAAAGCTCCTTCCGGTTACAGCGAAGATGATACGTTGGCGAATGTTGAGAACAACAGCGTCGAGAGAGCCGCGAAAACTTCGGTTAAGAGATCAGTGGAGGATCCGCAGTCGCcgaagaaacgaaagagaaatcGAAAACATTCCGAACAGAGCGGCAGCAATGTTATTATTAAGAAACCTTTGGGAAGACCACCGGCGAACGCCAGACAAACGAGAAACGCCGGAATGACCGCTGGTAGCGATAGCGACGATACCAGCGAAGGATCGAACACCTGCGGACTCAATGCCGCGCAAGCCGCTGCCGAAGCTAATATCATCGCTACAGCGATAACGGAACTCAGCAATTCTTCATCGAGATCTCCTAAACCAATGAAATACAATTTCTTCGTTGAACTCGatcccGAACTCGACGGCAGTCAAAGGATAGCTGTACTTCAGCACAAACTTACGGAATTGAGAAAAACATACAACGCTGTTAAAGTCGAACTCGCGGGCATTGAGAGAAGGCGAAAGAAACTGAGAAGAAGAGAACGCGAAGCTCTCAAGGCAGCTAAAGCGGAGATGCAGCAGGCGTGTTCTTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEAKHTDRKEFIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEGSPPRGSRDSGSGIGGKEGVETEPEIGRVVCVELGDKKKKDYWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKEMGNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNAVSSGNSDSDADLDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGQEDIDLYRLFRAVYKLGGYNRVTNQNQWKSITRRLNFAMLTAPPTYTLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPVPTATQATTPVPKATNDREKIEAEEEPKVVVEEEKKEKHRAEPVPPVPAVKEPIKEEEPVRPTKKKEVPEEPISGQESDVNVEAEGGESSSSEKSQKPLARFTPVPSNRSKSLSKTRDETKKKSHEKRKAQDPGTSSAVSASTTTPTSSLSASATITSSSTPTAQVSTSAKRQDGTSRREDKSKDEEPTKTRSKSKDDATKAKANVVEAARETRTPSRESEKTRANPTKQRRMTDEELKKQQRGRKKRDNEAEKSRPEKDENSGVESAASAPTYKGPVELGDRLKVYYGPTHESKVTYEAKVIDIEKDGNGEPAYLVHYTGWNTRYDEWIKGTRIAQNFTQSQSRIKRTKATPRPQTPSAGGSGVKSSKGSSGVAGANASASQSRRRAHQNVGGSASLPVTSAVSSSANASSSTSSSSGSSSSTAGKDKESSQPARSTTPLSVASSSSRTKSPATPATSNRPTRNTRNAEHGVELRRQTRRMSSRMDLVLYCTESDDSEPYEVVEEQRRRRVYRRRADDRMKADENSDVEEDEKDVVEEPRRTRRLRRNVVKVKDAKSAPNDGGIDDDEEEEEADDDEDDADEEDDPDEVEDIDDDAESESPQSKVSPVPSGAVATNFVASAEKESTNAPATYDRSHERHDEQPKGRDFDLNQIRSELKGFDKAVKLELVKFETDEPGDVTIKSEFPQELEKKPKEEKKLDVSKIEFPVDTKPVLDSTEDIYEFKEPEPFEFEVRNKRESNVDKEKSKKRVFDEEPKSPKKKQKTTVNATPKDNKTDVETVDRRKVRRTPAKKIDDNVDSTISINKSASAVSSKEQQEKSNESLNQPKPLPTPPPPLPPPPPPPPPPPPPPVTEEQTKSGANLDLLFTDLPGNNDDNAADADDPEDRLIISETEVSETEQESIFTYQQEIFASNDMPDRMEFTAGTSESTKATKIAVPTTTSGVVVSIATTTLPSSASLIERKSLDVARPTSSISSSSTTTMTMPAPISARLPATSTIEEKLSAAALAFRQVRSKETKRDDDSAEVTKKCGKEGSHKKSESAASKRNKAAIEEQAKAKFEAEASRKRESSGEEVTKQDEERFREVMRAVIKQKEEELEQLKLQKEAELKKIAEAKATAENRKGIEKRSGSGGGDDDWSKRKAHEAQTEFGRALSDASASPRDDEPHKENVERQRDKRKKVISQEFVDSTDSSDSEQKLVIDAVAEGREDKNETSNFDAKLKAELELLQQDSQQQENREATNSTRSNAQQNLSIRVIQQQSSLTVTKLATSTKSEEEGENMSSLLCEEEIPGSPAPGPDTTDQDGNGENRIVPKDERGEKKMVLLEMPFASAPTSGAQSSTTSGVSVGSNIGTISNSCNVPVSVALQIQQQQQQQQQQQAVGVSGSRHQMLQQQQQLPGPMAPQRRESNEAAPVMDNTPPTTPDSTISNISGSPREEERTGVSSPLSEENVKSHRDSSEADNDSGGKAPSGYSEDDTLANVENNSVERAAKTSVKRSVEDPQSPKKRKRNRKHSEQSGSNVIIKKPLGRPPANARQTRNAGMTAGSDSDDTSEGSNTCGLNAAQAAAEANIIATAITELSNSSSRSPKPMKYNFFVELDPELDGSQRIAVLQHKLTELRKTYNAVKVELAGIERRRKKLRRREREALKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00840833; iTF_00397840;
90% Identity
iTF_00397840;
80% Identity
-