Basic Information

Insect: Cryptotermes secundus
Gene Symbol: stc
Assembly: GCA_002891405.2
Location: NW:64420-104280[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.2e+04 -4.3 1.6 15 19 455 459 454 459 0.81

2 14 0.016 1e+02 2.6 0.7 4 10 488 494 487 494 0.96

3 14 3.2e-06 0.02 14.4 13.8 3 19 506 522 505 522 0.91

4 14 2.6e-06 0.016 14.7 12.6 1 19 558 576 558 576 0.97

5 14 2.1e-06 0.013 15.0 17.6 1 18 616 633 616 634 0.97

6 14 0.87 5.4e+03 -3.0 2.6 5 10 665 670 665 670 0.95

7 14 5.8e-05 0.36 10.4 13.4 4 19 683 698 676 698 0.87

8 14 1.5 9.3e+03 -3.7 2.0 5 10 727 732 727 732 0.93

9 14 0.0035 22 4.7 11.7 1 11 738 748 738 760 0.82

10 14 2.5e-09 1.6e-05 24.3 16.3 1 19 765 783 765 783 0.98

11 14 1.3 8e+03 -3.5 0.8 6 10 812 816 811 817 0.78

12 14 2 1.2e+04 -6.5 12.7 4 19 820 840 819 840 0.72

13 14 5e-07 0.0031 17.0 13.1 1 16 876 891 876 901 0.87

14 14 8.9e-07 0.0055 16.2 12.4 1 16 908 922 908 927 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.2e+04	-4.3	1.6	15	19	455	459	454	459	0.81
2	14	0.016	1e+02	2.6	0.7	4	10	488	494	487	494	0.96
3	14	3.2e-06	0.02	14.4	13.8	3	19	506	522	505	522	0.91
4	14	2.6e-06	0.016	14.7	12.6	1	19	558	576	558	576	0.97
5	14	2.1e-06	0.013	15.0	17.6	1	18	616	633	616	634	0.97
6	14	0.87	5.4e+03	-3.0	2.6	5	10	665	670	665	670	0.95
7	14	5.8e-05	0.36	10.4	13.4	4	19	683	698	676	698	0.87
8	14	1.5	9.3e+03	-3.7	2.0	5	10	727	732	727	732	0.93
9	14	0.0035	22	4.7	11.7	1	11	738	748	738	760	0.82
10	14	2.5e-09	1.6e-05	24.3	16.3	1	19	765	783	765	783	0.98
11	14	1.3	8e+03	-3.5	0.8	6	10	812	816	811	817	0.78
12	14	2	1.2e+04	-6.5	12.7	4	19	820	840	819	840	0.72
13	14	5e-07	0.0031	17.0	13.1	1	16	876	891	876	901	0.87
14	14	8.9e-07	0.0055	16.2	12.4	1	16	908	922	908	927	0.91

Sequence Information

Coding Sequence: ATGCAAAGTAAGATGGCAAGTAGGGAAGGTTCTTACTTTGGAggtgaaaaacaaaaatataattatcttCCATATGGATATGGAGGAAGTAATGTGCAGCCTTTCTCTGGAGCATCTGTTGGCTGGTCAAGCTACCCTATTTCTGTACCAGGTCCACAAACGCCCGTAGATGGGCTCCAGCAATTAAGTACATCATCTTTCACATATCAGCCCTTGCAGCCAGTCTCATCAAACTTTGTAAATCAAACCATGCATGGTACAAATACAAATGGAAGGtatttttttgaagaatttaaaacTAACTTGAATCCAAATGACGTACGTTTGGAAGTGGCAGCATCATCATCTCTGACACCTACTGCAGGGGAATTTATTCCAAGACCAATATCATTGCAGTTGGATTCCAAATTAGGAGGGGGTGCTGAAGAGGTAGATACAAATTGTGGGAAAGTGTCAGAAGAATGTAGACCATTGACGTCAAATTCTTACAACAACTGTGATCGAGGAAGCCACGTGTTTAGAAGACATGGTGGCAgtgattcaaaatattttcattccacccGAAACCCACCCTGTGGACCTGTTCACAATGATGTTTATGTTAATCGGAGAGGAAATGCCCGTGCAGTGTTACAGAATACTGCCACAAATTCTAAGTCATATAATATGGAGAAAGCAAAGAATCAAGATCGACAGAGGTTGCTGGCTGAAGCAGCAGCGTTTTTAACGTCATCAGGTAGTTCCAGTGTGGTACCTGTCTCAGATGTCAACAGTAATTCAAGTACAGAAATGAAACAACAGAATATGAATGTTACTTCTCAGTGTCGACATAAATATAAAGGAGAATTTAACAGGTCATTCATGCCCCCAAACAAACATAATGGTGATGCATCAGGTGTGAATTTTAAGAATTATattcagcagcagcagcaagaaAACTTGGGCCAATCAAAGAGGAGAAATGATGGCTCTTGCAATCAGTATAACCAAGGTGGCTCTCGTAATGAACGAAATGTGACATTATCCAAAACCAGCAACGGAAACAAACTGAACCACCAGTATCGACTTGCTAGTTATAATAGTGGATATAGTTTTCGTGGAGCAGGAACTTTAGAGTGTGCATCCCCCAGGAAGGAGGCAGATCACAGTGGAGACCACAGTGTTAATACAACAGATGATGGTGCCAGCCAGAGAGAGCGTCTTACTGAACAACTGACACGTGGGATGCTTGAATGTCTGGTATGCTGTGACAGAGTCCGGCAACACGATGCTGTATGGAGTTGTACCAACTGCTACCATGTGTTGCATTTGAAATGTATTAAGAAGTGGGCTAAGTCTTCAAAGGCAGAATCAGGTTGGCGATGTCCTGCTTGTCAAAATGTGACATCCAAGATCCCACATGAATACCATTGCTTCTGTGGGAAAATGCGTGATCCAGAATGGAATCGAATGGATGCAGCACACACATGTGGACAGGTGTGCGGGCGTTCTCAGAATGCACGACATCCAGACTGCACTCATAGATGCACTTTGCTCTGTCATCCTGGTCCCTGCCCAGACTGTACAGTCCAGGTCAACAGGAAGTGTGGTTGTGGGAAGAAGTTACATCTTGTCAAGTGTGGATCAGATCAGCCCCTGCTCTGTGGTGGAGTGTGTGCGAAAGACCTCAACTGTGGTGTCCATTACTGTCCCAATAATTGTCACACTGGTAATTGTTCTGAATGTCAGGAGAAGGTAACACAAGAGTGTCACTGTGGGAAAGAGGTACGTGAAGTTCTGTGTACCCGAGAGTCCTCAGCTTCAAAATACTTTTCCTGTGGTGGAGTGTGTGAAAGAAAACTCTCTTGTGGGAACCATCCTTGTGGTCTGAAATGTCACCCTGGACCCTGCCCTGACTGTGAACTTTCGCCAGATAAGGTGACACATTGCCCCTGTGGGAAGATGTCTCTGGCAGATAAACAGATCCGATCAAACTGTTTGGATCCGATCCCTACTTGTGAACAGAAGTGTAACAAAAGACTGCAGTGTGGACAGCCAAGTGATCCACATTTATGTCAGCTGGATTGTCACAGTGGACCGTGCCCTGTGTGCCCTCTGACTACAATGGTTAAGTGTAGATGTGGCAACATGGATCGGGAAATATTGTGCCAGGATCTTACCACTAAGGCTGATGATGCTAGGTGTGAAAAGAAATGCACGAAGAAACGGTCGTGTGGAAAACACAAATGCAACCAGCTCTGTTGTATTGATCAGGATCATGTATGTCCCCTTCCTTGCAACCATCAGTTAAACTGTGGACAGCATCGTTGTGAAGACACTTGCCATCGTGGTCACTGTCCACCTTGTTGGAGAACAAGTTTTGATGAGCTGTACTGTGAATGTGGATCAAGTGTATTGTATCCTCCCATACCTTGTGGCACAAGGCGCCCAGAATGCTCAAGACCCTGCTCACGACCTCATTCCTGTGAACATCCAGCTCTTCATAATTGCCATAGTCAACCTGTTTGTCCACCATGCACAGTACTTACACAGAAATACTGCTACGGTAAACATGAGTTGCGAAAAAGTGTACCATGTTATCAGACAGAGCTTTCATGTGGTCTTCCATGTAATGTGAATTTGCCTTGTGGACGTCATCGTTGTATTTTACCTTGCCACAAGGGACCATGCCTTAAGGAGGGCCAAACTTGCACACAGCCATGCACTACACCACGAAGCCTCTGTGGTCATAACTGTGCAGCTCCTTGTCATGATGGGCCATGCCCAGATACACTGTGTAAGGAAATGGTGAAGGTAACATGTGAGTGCAGACATCGTTCAATGAGTCGAGCATGCTCAGACAACACAAAAGAGTACCAGCGTATTGCAACCTCACTCCTTGCTTCCAAAATGGCTGATATGCAGCTTGGTCATTCTGTTGACATTACAGACATTCTGGGGAACCCTTCAACTAGAAAGATGAGCCTGAAGACattggACTGCACTGAGGAATGCCGTGTAATTGAGCGGAATCGTCGGCTTGCTATTGGACTACAAATCCGTAATCCTGACTTGAGTGCTAAACTCACACCTCGCTACTCTGAATTCATGCGTCAGTGGGCTAAGAAAGATCCCCATTTCTGTAGCATGGTCCATGATAAACTTACAGAGTTGGTACAGCTTGCTAAACAGTCAAAGCAGAAGAGCCGTAGCTATTCATTTGATTCAATGAAGAGAGACAAGAGGCACTTTGTTCATGAGTATTGTGAACATTTTGGCTGTGAATCAGTTGCTTATGATCAGGAGCCAAAGCGCAATGTAGTAGCTACAGCTGCTAGAGACAAGGCCTGGTTACCAAGCATGAGTCTGTTAGAGGTGATACAAAGGGAAAATGGCCAAAGGAAAATTCCTAAACCTGTCATAAGCAAAGCCCATTCACCATCACAGAGAGCCATGGATATTTTGCCAGTGAAGTGTTCTCACTCACAGTTAACTTCCAGTGCAGTTAAATCTGCTAGTTCTATTCCAGCCATAAAATCCAGTCCAGAGGAAGAAGAAATCGATTACTTTGATTTCTCATAA
Protein Sequence: MQSKMASREGSYFGGEKQKYNYLPYGYGGSNVQPFSGASVGWSSYPISVPGPQTPVDGLQQLSTSSFTYQPLQPVSSNFVNQTMHGTNTNGRYFFEEFKTNLNPNDVRLEVAASSSLTPTAGEFIPRPISLQLDSKLGGGAEEVDTNCGKVSEECRPLTSNSYNNCDRGSHVFRRHGGSDSKYFHSTRNPPCGPVHNDVYVNRRGNARAVLQNTATNSKSYNMEKAKNQDRQRLLAEAAAFLTSSGSSSVVPVSDVNSNSSTEMKQQNMNVTSQCRHKYKGEFNRSFMPPNKHNGDASGVNFKNYIQQQQQENLGQSKRRNDGSCNQYNQGGSRNERNVTLSKTSNGNKLNHQYRLASYNSGYSFRGAGTLECASPRKEADHSGDHSVNTTDDGASQRERLTEQLTRGMLECLVCCDRVRQHDAVWSCTNCYHVLHLKCIKKWAKSSKAESGWRCPACQNVTSKIPHEYHCFCGKMRDPEWNRMDAAHTCGQVCGRSQNARHPDCTHRCTLLCHPGPCPDCTVQVNRKCGCGKKLHLVKCGSDQPLLCGGVCAKDLNCGVHYCPNNCHTGNCSECQEKVTQECHCGKEVREVLCTRESSASKYFSCGGVCERKLSCGNHPCGLKCHPGPCPDCELSPDKVTHCPCGKMSLADKQIRSNCLDPIPTCEQKCNKRLQCGQPSDPHLCQLDCHSGPCPVCPLTTMVKCRCGNMDREILCQDLTTKADDARCEKKCTKKRSCGKHKCNQLCCIDQDHVCPLPCNHQLNCGQHRCEDTCHRGHCPPCWRTSFDELYCECGSSVLYPPIPCGTRRPECSRPCSRPHSCEHPALHNCHSQPVCPPCTVLTQKYCYGKHELRKSVPCYQTELSCGLPCNVNLPCGRHRCILPCHKGPCLKEGQTCTQPCTTPRSLCGHNCAAPCHDGPCPDTLCKEMVKVTCECRHRSMSRACSDNTKEYQRIATSLLASKMADMQLGHSVDITDILGNPSTRKMSLKTLDCTEECRVIERNRRLAIGLQIRNPDLSAKLTPRYSEFMRQWAKKDPHFCSMVHDKLTELVQLAKQSKQKSRSYSFDSMKRDKRHFVHEYCEHFGCESVAYDQEPKRNVVATAARDKAWLPSMSLLEVIQRENGQRKIPKPVISKAHSPSQRAMDILPVKCSHSQLTSSAVKSASSIPAIKSSPEEEEIDYFDFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -