Csec011521.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- pnr
- Assembly
- GCA_002891405.2
- Location
- NW:339967-447431[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 6.8e-15 53.9 3.2 1 34 168 200 168 202 0.97 2 2 4.9e-19 1e-15 56.5 6.2 1 35 222 255 222 256 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAACCGAACGGTTTGTCGGGCGCCGTGAGCTACGCCGACTCCACTCCACCCAGCAGCGGTACTAACACCGGGAACTTTCTGGGGGTCGCTGCAGCTGTCGGGAGCACGGCACATCACCAGCATCCCGTCTATGTTCCCTCTAACCGAGCAATGATGGGGGGACTTCCCCAGCACCACCACCACCCGCAGTACAGCCCCTCGGGGGGACCCACAACCAACTCCCACCACTTCGTAGGAGGATCCACCAGCAGCGCCAGCTCGTGGCACCATCAGCCAGGGGCACCGGACAGCTACATGACGGCGGCCGCTtcccaccatcatcatcatcaccacctgGGTACGGGAGCACCACATCACCAGACCCCACTCTCAAGTCCGTTCTACGCTCAGAACGCGATGATGATGTCCTCGTGGAGAGCTTACGACAGCACCGGCTTCCAAAGGACGTCTCCATATGATGGAGCAATGGAATTTCAGTTCGGTGAAGGTCGCGAATGTGTGAACTGCGGTGCCATTTCGACTCCCCTGTGGCGTCGGGACGGTACTGGCCACTACCTGTGCAACGCTTGCGGTCTCTACCACAAGATGAACGGCATGAACCGCCCGCTCATAAAACCGTCCAAGAGGCTGACCGCCACGCGACGCTTAGGCCTGTGTTGCACCAATTGCGGGACTCGTACCACGACGCTATGGCGTCGAAACAACGAAGGTGAACCCGTATGTAATGCTTGCGGCCTATACTTCAAGTTGCATGGCGTCAATCGCCCGCTCGCCATGCGGAAGGACGGCATCCAGACGAGAAAGCGCAAACCGAAGAAGCAACAGTCTGCTAGTGGTGGGGGCACTTCTGGGGAAAAGGCGCAGGACGACTTAAACGAGCCCAAACTCAGCCCAGGACACGCGCAGTCAAATGATGGGGCTGGCAGCACTGTCCACCAGTCGAAGACATCCTTGGACGACCCTCATCCGTACTTGGGCCACACGTCCCTGCTTGCCCCACCTATCAAGTCAGAACCTCCAGAACACCAGTTCAACAAGATGATACCCACCAGCACACCTGCTTCGACAACAACAGCAACTGGCGTCTACTCGAGCTTAACTGCCCCaaatcatcaccatcaccaacTTAATAATCATCAGATATTTGGTTTTCCACCGCCTCCAGCACCCGTAGCACCAGGTTCAGCGGGTGATATCAGTAGTTATGTCATGGGTCATCATTCCgcacatcatcatcaccatcaccatcatcacatGACCGCAGCAAAATTAATGGCAACGACATAG
- Protein Sequence
- MFQPNGLSGAVSYADSTPPSSGTNTGNFLGVAAAVGSTAHHQHPVYVPSNRAMMGGLPQHHHHPQYSPSGGPTTNSHHFVGGSTSSASSWHHQPGAPDSYMTAAASHHHHHHHLGTGAPHHQTPLSSPFYAQNAMMMSSWRAYDSTGFQRTSPYDGAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKQQSASGGGTSGEKAQDDLNEPKLSPGHAQSNDGAGSTVHQSKTSLDDPHPYLGHTSLLAPPIKSEPPEHQFNKMIPTSTPASTTTATGVYSSLTAPNHHHHQLNNHQIFGFPPPPAPVAPGSAGDISSYVMGHHSAHHHHHHHHHMTAAKLMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01567497;
- 90% Identity
- -
- 80% Identity
- -