Basic Information

Insect: Cryptotermes secundus
Gene Symbol: -
Assembly: GCA_002891405.2
Location: NW:20203-84871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0029 0.081 12.9 0.3 2 23 1017 1039 1016 1039 0.94

2 8 0.33 9.3 6.4 0.8 1 20 1307 1326 1307 1330 0.91

3 8 6.3e-05 0.0018 18.1 1.2 1 23 1366 1388 1366 1388 0.94

4 8 0.00016 0.0046 16.8 0.2 2 23 1401 1423 1401 1423 0.91

5 8 0.00079 0.022 14.7 2.5 3 23 1431 1451 1429 1451 0.95

6 8 0.033 0.94 9.6 3.7 1 23 1457 1479 1457 1479 0.97

7 8 0.00076 0.022 14.7 4.7 1 23 1485 1508 1485 1508 0.98

8 8 0.1 3 8.0 0.3 1 23 1517 1539 1517 1539 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0029	0.081	12.9	0.3	2	23	1017	1039	1016	1039	0.94
2	8	0.33	9.3	6.4	0.8	1	20	1307	1326	1307	1330	0.91
3	8	6.3e-05	0.0018	18.1	1.2	1	23	1366	1388	1366	1388	0.94
4	8	0.00016	0.0046	16.8	0.2	2	23	1401	1423	1401	1423	0.91
5	8	0.00079	0.022	14.7	2.5	3	23	1431	1451	1429	1451	0.95
6	8	0.033	0.94	9.6	3.7	1	23	1457	1479	1457	1479	0.97
7	8	0.00076	0.022	14.7	4.7	1	23	1485	1508	1485	1508	0.98
8	8	0.1	3	8.0	0.3	1	23	1517	1539	1517	1539	0.95

Sequence Information

Coding Sequence: ATGAAAGTTACAAAACAGGAAGCACAAGGTACCAAGAGCAAAATCCATAATCATGTAGCAGAGAAAAAGTTTAAGAACATTTCTTTGAGGAAAACTGACCCAAATGAGGGAGCAGTCTCAGCACCCTCATGCCATCAGCGAAAAGGGACAGAGCtatcaaaaataaaacatgtgGATGAGCTTAATATTATTCCACCTGGTCATCGGCAGGATTCTATAAATGTATCAACTGAGACACCTGTTCTGTTGTCTGGTGATGGAATTTTGCGGCAGGCACTGTTATCATTCAGCTACTCTGGACAGGAAGAGAAAGCACTGAAGGAAACaattaacaaaaaaaattacattacaaCTAAGGCTCAGACAGTTGCAGTCAGCAACATCAAATTATCGTGTTCTACTCCTGGTCCACTATCTCCAGAAAATGTGCAGAAAACCTTGACTCACGGAGCTCTTCCATCAAAATCGTTATCTCCTGGAACCCTTCTGACAGGGTCTTTACCTTTGGGAAACCTTGTTTCTCTACCACCAATATCTTTCACATCAGAAGCATTTTCACATAAAACGCTGCCTCTTATGTCTTTAACATCGGGTCCTCTGCCCCCTGTTTCCGAAATTCCACGTCCTGGGAGTATTCCTTCACTTGGTTGCTCATCGTCAGCATCTCCTAGGAATACAATTTCAGCAGGTTTACAACGTCCAGGCATTGTTGCCAGTGTGCCATCCACTTTCAGTGGCAGTTCAGGCAATGTACCCATTCTCTCTGAGGCTCCAACTTATGAAGTCACACAGTCACTGAAAGTCCTAGTTTCATTGTCACCATCAGTACACAGAACTGCTGAATCTCAAGTCCTGACCCAGACTTCAGCTCCTTCCAAAGAAAGTTCTGTTACTTTAGTTTACTCATCCATACCAAAAATGGAACCATCCTTTTTTAATGCTTCTCACAGTCTGTCCCAGAAGGTCATACCCCTCCCACCAATGTCTGAAATGAAATCTCATTGTACAAATCACCTGCAGGCACTGTCGCATGGTAAGGTTGATGACTCTTCTAGTGCTTCTGTTAATGACCATACTGATGGTGATAGCATTTGTGAAGTTGTCCCAGTTAGCACTGATGTTCTGTCAGTTGCTGACTGCACATCTCAAACTAGCATCTCAGTGCTTTCTACTCCAGTTTCAAGTGATCCCATCCATGGAAACAgtacaaatacaataaaattagaTGAAAATCATGATTCTGCAGAAGAACTGAGCCAAGTTCATTCAATTCAAAATGTATCCATTTCACATTCaataaattttcagacaaataatTGTTCATCTCCTGATTTGAACCATATTGTCATACCAGTTTCCAGTGGTATTGCTTCTGGTAAGGTGGATGACCATCATGTCTTGTCAGCACAAGATATTGGCCAAATAATTACAATTCCACTAACTTCAAGTGCAATTTATGGCCATCCTGTTGGTATCTCTATCCCAATTTCTGGTAATGCAGTTCCTCTGTCCATGCCCGTACAAGTTTCGTCTGCTATTTTACCAATGTCTTGCAGTTTGCTGCCAGTTTCTACTAGTACTGCCACTATTCATCCACCATCTATTCCTGCTTCTGAGGCTTCAGGCCTGCTAGTACCAACTGCAGGTTCTATTCGATCATATCCTAGTACAGTTATTCCATCTGTTGACTCTGATACTGCAGAAACTGCAGTCCAACATTCTCACCTCTCAACTGACATCTCTGGATTAGTAACAGTGACTTCAAGTATGGCTTTGCCAGTTTCACACTCAAATACTGTGTCTGTTACATCTGCTTCCAATACTGGTGTTGCAGTTACTTCTAGCACAGATCCAGTACCAGTAACTTCTGTCGCTGTGTCTCTGCCTTCCTCATCAGCAAGTAATGCAACTACAACAATGGTATTTGCAACTCAGAATTCGTCAGTGGAATCAGTTTCTGCCTATGCCATGCAATCTCCAGCAGAGATCCTGTCACAGCTTTCTAAGGCTGGAGTACTTCCGACAATGAGCAGCAGTCAGGTATCATCAGTACTGTCTGCTCTTGCAGCAGATGGTTGCCACTTGGACCTGGAAGCTGAAAACTCTCATAATGTGGAGCTAATGACTCAGCAGCAGGTAATGCACCTATCATCATCTGCAGATAAAGTATCAACTCTAACACAGACAGAAGATCTGGAGTTGGGCCACACAGTGGAGTTGGGTTGTAACATTAATATAGAACCCCAGCATAACAAAGTGATGAGTGCTGCAGATGACATCCATCTTGCAGGGTGTGGAAGGTTAATGGAGCACCACTTACATCTTTTAAACCACACACATGGAAATTCTGGTATTGATACAGCTTCTTTGTCGCCAAGTGTTTCACTTCCAGAAAAACAGGCTTCTGTTTCAAATTTACCTTCCATAGATAGCATTCAGGTATCAGATGAAAATGCCGTCATCAAACATCAGGCTGAGGTAAATCCGAGGGTAATTGGTCCTGTAGATATTGACTCAAGTACTCTTAAACAGACAGCATCCATGTATCCTAGGATAGTTCCTAAACTTAATTTGGCTCCTAATGAACCTATAACTACTGGTTTGAATAAAAGCAACGTAAGTTCCAAGCTTCATATACCAAAACATGGAAGTGAATCTTTTACAAGCTCCCGTGTTAGTGATATGAATCGTGAACAGCGTATTGTTTCAGTGTTCATCAAGCAAGAAAACTTTGAAAATTCTCTAAATCAGAAAGTTAATAAATCTGGATTTGATGGACTTAGAGATAAAGAATCAAAGAAACGTAGACTTCAGGATATTAATAATGGGAAAGACAACAATGAGTATAGAAATGCTAAGTGTactaaagaaacaaagaagcaaAACATCAAAAATGTGGAAATGGACAGTTATGTAGAACAAGTTGCTTGTTACAAGTGCAAATTTTGCTCTTTCCTTACACTTGAAAAGGAAGGAGTAGCAATGCATGTTCAGCTTGTACATATTTCACAATTACCAGGTAATCAACAGGAAACCAGGCACAACATCAAATGCCCAGGATGCGAAAATGTTTTCTTTACTTCAAAGTCTCTCAGGGTTCATCTTTCACAAGATCACCAAGTGGGAGATGAGGAGTTAAGGACATTAATTGAAGTAGTAATCAGGTCTTCATATAAGGATGCCAAAGCCAAAAACAAGTTTGATAAGAAAAGAAAGAGAAGCTTAGCTACAGCTCACCCTCTTGAAATTTTGAATCCTGTTGACAATGAATGCAGTGATGGTAAAGAGGTACCAAGTGTTACCAACAGTGTCAGGCAGGTTAACTGTTCAGCTACTGACATGATGCTTGATGAATGCAGCAAGATCCGAGTGAGGAACTTGAACAATGAAGTGCTGCCTGAGCTTGAGGACACTCTTGTGTCTCATTCTGACACCACTGCTGTTACTGATGTTAGGAATGAAGACAGTCTGATTAGCAATGGTGCATCTGATGGTGATGTGAGGGAAGGAACATTGGTCATAGATGACAATCATCTGACACAGCAGAAGCATGCAAAGATAACAGTGGATGATGTCTGTGAGTTTAAGATGATCAAGACTGATACAGAACCAGTAGCTGGACCTGGAGTCACTTCTGAAATAGTAGTTCGTAATGCAGCAGGTAATTCATTGGGTCAGAAGGAGCAGAGAAATGAGCTGAAGTCTAACCAAAGAATGTCTCCATTAGCTAAGAAGAAACCAGGTCGGCCAAAAGGTTCTAAGAACATCCCTGCTAATGGATATCAGAAATTGTCTTCTGCACAGAAGGAACTCATGGAGAAGGAGTTAGGTTATAGATGTGATATAGATGGTTGTGCAGTCCGTTTGCGTTCTCATGACAACATTGAGTACCATCGTCGTTGCCACCATGATGAGAAGTTTCTGTGCCCTGAATGCTCACAGGAAACAGTCCACTGGAAGTCACTCAGCACTCACCTTTGGCGTTACCATGTGATTGACATGGAACTCTTTGCATGCGACCAGTGCAGTTATAAAACAAACAGTTACAGCAAACTGATAAATCTGCATCGCCGAATCCATGGAGATGAGCGTCCATTCCTCTGTGATACTTGCGGGAAGGGATTTAAGAACCGAAAGCAGTTGCGTAATCATAAGGCAATTCATATGGCAAAACAGAAGCAGAAAGCTGGTCCAACTGGAGAGTGTGATGTCTGTGGTCGTACTTTTACAAATCCTCGAATGTTGCGAGTTCACAAGGATAATGTCCATGGTAAATTGCGGCCACATCTTTGTAACTTCTGTGGCTATTCTGCCTCCTCACGTAGCACATTGAAGATGCACATGCGGTTGCATACCGGTGAGAAACCTTTCCACTGTGATGAATGTGAGTACGCAACAGCAGATCATAATTCTCTTCGACGACACAAGATGCGCCACTCAGGAGATAAACCCTACAAGTGTCCACACTGTTCCTATGCCTGCATTCAGTCCAGCACATATAAAGCTCACCTCAATACAAAGCACCCTGGTCTGGAGACTGGGTTGATGTTTAACTGTGATTTATGTTCTTTCCGATCAGTGCGTAAAGACAACTACATGGCCCATGTTGCAGAGCATAAGAATGAATCATACCCTAGTAACAGACATAGAAACCACAGCAGTCCAAAACCTCAGAGTGATTCAAATAAAAAATCCCAAGAAAAGGAAATTTCATCTGGGCTGGAGAAGCCTCATCTTCCAACAATCATCAATATTTCCCACATTATTGGACCTGTGGATGCTGGAGAAAGCACATTACATGAAAATGCTGAGTCTTCTGATAATGTACACCTCATCTATAATGGTAGTACTGTAGAGACACTTCTTCAACAGTCATCAGAGGAAGTAGAAAGGCGGTTTGGAGTGGAAATGGCATCTGATTCAGTGATTCACTTGGTAGAGAACTTGGATACCAGCAGTGACACCAGTGGGCAGCATGTGACACAGAGTGTGGAGACACTTTGTGTGGCCAACATTGAAACAGTAACAGAGATGCCATTGACACCAGAATTTGAAGCTGAGCAAATAACAGGAGACATTCAGGATATCAAAGAACCTCAAGAACTTAAATTCAAGGTTGGAGAAGATATGGCTTCATAG
Protein Sequence: MKVTKQEAQGTKSKIHNHVAEKKFKNISLRKTDPNEGAVSAPSCHQRKGTELSKIKHVDELNIIPPGHRQDSINVSTETPVLLSGDGILRQALLSFSYSGQEEKALKETINKKNYITTKAQTVAVSNIKLSCSTPGPLSPENVQKTLTHGALPSKSLSPGTLLTGSLPLGNLVSLPPISFTSEAFSHKTLPLMSLTSGPLPPVSEIPRPGSIPSLGCSSSASPRNTISAGLQRPGIVASVPSTFSGSSGNVPILSEAPTYEVTQSLKVLVSLSPSVHRTAESQVLTQTSAPSKESSVTLVYSSIPKMEPSFFNASHSLSQKVIPLPPMSEMKSHCTNHLQALSHGKVDDSSSASVNDHTDGDSICEVVPVSTDVLSVADCTSQTSISVLSTPVSSDPIHGNSTNTIKLDENHDSAEELSQVHSIQNVSISHSINFQTNNCSSPDLNHIVIPVSSGIASGKVDDHHVLSAQDIGQIITIPLTSSAIYGHPVGISIPISGNAVPLSMPVQVSSAILPMSCSLLPVSTSTATIHPPSIPASEASGLLVPTAGSIRSYPSTVIPSVDSDTAETAVQHSHLSTDISGLVTVTSSMALPVSHSNTVSVTSASNTGVAVTSSTDPVPVTSVAVSLPSSSASNATTTMVFATQNSSVESVSAYAMQSPAEILSQLSKAGVLPTMSSSQVSSVLSALAADGCHLDLEAENSHNVELMTQQQVMHLSSSADKVSTLTQTEDLELGHTVELGCNINIEPQHNKVMSAADDIHLAGCGRLMEHHLHLLNHTHGNSGIDTASLSPSVSLPEKQASVSNLPSIDSIQVSDENAVIKHQAEVNPRVIGPVDIDSSTLKQTASMYPRIVPKLNLAPNEPITTGLNKSNVSSKLHIPKHGSESFTSSRVSDMNREQRIVSVFIKQENFENSLNQKVNKSGFDGLRDKESKKRRLQDINNGKDNNEYRNAKCTKETKKQNIKNVEMDSYVEQVACYKCKFCSFLTLEKEGVAMHVQLVHISQLPGNQQETRHNIKCPGCENVFFTSKSLRVHLSQDHQVGDEELRTLIEVVIRSSYKDAKAKNKFDKKRKRSLATAHPLEILNPVDNECSDGKEVPSVTNSVRQVNCSATDMMLDECSKIRVRNLNNEVLPELEDTLVSHSDTTAVTDVRNEDSLISNGASDGDVREGTLVIDDNHLTQQKHAKITVDDVCEFKMIKTDTEPVAGPGVTSEIVVRNAAGNSLGQKEQRNELKSNQRMSPLAKKKPGRPKGSKNIPANGYQKLSSAQKELMEKELGYRCDIDGCAVRLRSHDNIEYHRRCHHDEKFLCPECSQETVHWKSLSTHLWRYHVIDMELFACDQCSYKTNSYSKLINLHRRIHGDERPFLCDTCGKGFKNRKQLRNHKAIHMAKQKQKAGPTGECDVCGRTFTNPRMLRVHKDNVHGKLRPHLCNFCGYSASSRSTLKMHMRLHTGEKPFHCDECEYATADHNSLRRHKMRHSGDKPYKCPHCSYACIQSSTYKAHLNTKHPGLETGLMFNCDLCSFRSVRKDNYMAHVAEHKNESYPSNRHRNHSSPKPQSDSNKKSQEKEISSGLEKPHLPTIINISHIIGPVDAGESTLHENAESSDNVHLIYNGSTVETLLQQSSEEVERRFGVEMASDSVIHLVENLDTSSDTSGQHVTQSVETLCVANIETVTEMPLTPEFEAEQITGDIQDIKEPQELKFKVGEDMAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -