Basic Information

Insect: Cryptotermes secundus
Gene Symbol: zfh1
Assembly: GCA_002891405.2
Location: NW:337875-1309999[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.043 1.2 9.2 0.3 2 23 214 236 213 236 0.94

2 9 0.0064 0.18 11.8 1.2 1 23 270 292 270 292 0.96

3 9 3.2e-05 0.0009 19.1 0.6 2 23 299 320 298 320 0.97

4 9 2.2e-06 6.2e-05 22.7 4.6 1 23 329 351 329 351 0.99

5 9 0.0002 0.0058 16.5 0.9 1 21 357 377 357 378 0.95

6 9 0.044 1.2 9.2 4.9 2 21 692 711 691 716 0.92

7 9 2.2e-05 0.00063 19.6 0.9 1 23 1167 1189 1167 1189 0.94

8 9 0.002 0.058 13.4 10.5 1 23 1195 1217 1195 1217 0.98

9 9 0.0035 0.1 12.6 5.3 1 21 1223 1243 1223 1244 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.043	1.2	9.2	0.3	2	23	214	236	213	236	0.94
2	9	0.0064	0.18	11.8	1.2	1	23	270	292	270	292	0.96
3	9	3.2e-05	0.0009	19.1	0.6	2	23	299	320	298	320	0.97
4	9	2.2e-06	6.2e-05	22.7	4.6	1	23	329	351	329	351	0.99
5	9	0.0002	0.0058	16.5	0.9	1	21	357	377	357	378	0.95
6	9	0.044	1.2	9.2	4.9	2	21	692	711	691	716	0.92
7	9	2.2e-05	0.00063	19.6	0.9	1	23	1167	1189	1167	1189	0.94
8	9	0.002	0.058	13.4	10.5	1	23	1195	1217	1195	1217	0.98
9	9	0.0035	0.1	12.6	5.3	1	21	1223	1243	1223	1244	0.96

Sequence Information

Coding Sequence: ATGGCAAGCCGACGGAAGCAGTTTTTGGTCAGACGAAGGCCTCAGAAAGTCGACCTGGAGAACCTGTCCTCAGACAACGTAGTACTGACCTCGGCGGCTGCTAGCGTGGGCGGCGCAGGGGCGGCAGGTGACCTTTGCGCCCCACCAGCAGCCGCCATGAGCCCCGACAACAACCACAACCATCAACCTCTTGCCGATGGAACCTCTCGGCAGACCGAAGACCAGAACTGTCTGATAGTGTCGTCACCTGACGAAGGTGAATCTGGGAGGATATTTGTTGGGCGTGATGCGGGCAGTGCAGGACTCCAGGGGTTGCTCATGGTGAAAGTGAGGAAGGATGCGGAGGGACAGAATGAGGTCGAGGTTCTGGGTGATGAAAGTGAAGTGATATCGACTGACGAAGTGCCTCGGAGACGCCAAATGTTGAGAAGAGGACTCCTGGGGGAGGAAGAGGAGAAGATCCTGCAGGAGTACATGCAGAGGAGCGACACTGCCGTCATATTCCCGGAACCCGTCGAACAAGTACCGCTGCCAGCTGCCGGCCTGGGTAAAGCCATCTCGCCAGGATCTGGCGTTGACGGTGTCGGCGGAGGGGCTGGGGGCGCCGGGACTCCAGGAATAGGGACCGACTACTTCATCAAATGCCCACAGTGCCACAAAGGTTACCCAGGATTTCAAGCGCTGAAGGAGCATGTGGAGTCAAGCCATCCGCCCCCATCACATCTCGGGGGTGGTGATGATGTCGTGTCCCAACCCACGTCACCAGTCGGTTCTCCTGCCCCGAACAGCTCGGCTCCAGGCGTCGGGTATGCTTGTTCCCAGTGTAACACTAGTTTCCTGCATAAAGATCAGCTGGAGCAACATGAATTGGTCCATTCTCCAAACGCCCAGGTGTCCTGCAAAGTGTGTAACAAGACATTCGCGAACGTGTACCGCCTGCAGCGCCACATGATAAGCCATGATGAAAGTGCTGTGCTACGGAAATTCAAGTGTCCGGAGTGTGAGAAAGCTTTCAAATTCAAGCACCATCTCAAAGAGCATATCCGGATTCACAGTGGAGAGAAGCCATTTGAATGTGCCAACTGCGGCAAGCGATTCTCACATTCTGGATCGTACTCGAGTCACATGACCTCGAAGAAGTGCCTCGTCATGAACCTCAAAGTGGGCCGCGGAGGTCGTGGTGGGCCCAATTCCCTCCTAGATAAATGTCCGCCTCATCACAGGGGTGCAGGTCATGCATCCAAACGTTCCCTAACAAATAATAGCCCTTTAAATAGTAATACATCCAATGCTACAACAAGTTCCAATATGACCAATAACACCTTTCCACCAATTCTTCCGAAGTATGGTGATACCTTCCTGTCTGCAGTCACTCCACGAATTCCCAGCAGGTACTCCACATCACATCCCCACCCTCCAACTCCGAGTCTACATCCTTTCTATATGGCTGTAGCTCCAACAATGCATCTAAATCCAAACCCCAACTCAGGGATCAACTCTTATAAACTTCCTGCATCCCTTAGTAATCTCCTGGAGCACCTTACTACATCTTCCCCACCTCACCAACCAAGACTCTCCATTGCTGAATGTGACAAGAGAATGGACGAAGCAGTGGAGCAAGAGAAAGGCAATGAGACAGCGAATAATACCCAGAACCAGGAGAAGAAGGATGACGGAGGTGGCAAAGATACGAAGAAAGCAGCAGAAGTAAAGGAAGAGCATGAGGACGAAGGTGCCACAGATATGTCCGCTCCTGAGGGACAGTATGGTAGGCAGGATGAAACGGGTGAAAGGGAATCTCCTATTGCCAGAAGTGGGAGTAGAAATTCCCCAGGTTGTGGCAGTAACAGTGGTGACCTGGAGGCAGTAAAGAGGATTCTGGAAACAGTAAATGCTACAGTAACTAAACAATTTCTGGAAGCCAACATGCAGAAGTTGACATCTTCAACTTCTTCAGGTAGTGGTTGTCCAAGCATTGCCAGTGCATCATCACCAACTGGGAATGGTACTGAAAGTAATGTACCTGAGTTCCACAAGAAAAGTAGTGAATTTTCATCCTTGTACGACCTTTTATCATGCAGACATTGCCAGAAGAAATTCCGAAGTCCCATTGACCTCCATCAACATGAACGGTACCTGTGTGAACATGGTGCAGGGGATCGCAGAAGTGAAGGGCTTGCTGCAAAATTGGAGGATGCTGTCACAGTGAAGACCGAAGAGATGTCACTTAATGGTGGGTGCAGCGGAAGTGAGGATGGCGATGATGCTGATGGACAAATTTCTGGCAAAGAgccagcaacagaagaagatgAGTACGAAGCTGAATCCGTTACAACAACGGACCAGGTTTCGGAAGATGGACGAAAAGTCCGTGTGAGGTCCCTGATAGCTGATGAACAACTCGCAATCCTCAAAGGCCACTATTCCCTTAATCCAAGACCTAAGAAAGATGAACTTGCAAGAATAGCAGATAAAATTGGGTTTTCAGTTCGTGTAGTGCAGGTCTGGTTTCAAAATACTCGTGCTAGGGACCGCCGTGAGGGGCGGTTAGTTCACGTCCCATACGTTCCTTTGGCGACAGTTCCGGTATTTCCTCCAGTGTCTCTTGTGCCTTCATCACAGCCGTCACACCTTCAGACTATGAATGTGGGTCACTACACCACCACATCACCTCCACTATGCCCTCCTTCTGGTGCAGAACAGCCATTGGACCTTTCTACTAAGAAGACACAACGTTCTCTAGCCTCAACTCCATCCAGTTCTCCCCTTAGGCCAACATCAGCAACTGCTCATTCCGATTCCGGTGAGGATGTAGGTTGTGCCATGAATCTCAGTCGCAAGTCATCCTCATCACGTAGTCCTACCCCGAATAGTAGTGCCATGTTAGCAGCGCCGTTCAGACAACTCCTTCCGTTCCATCAGTCCCATTATCCACATTCCTCATGTTCTTCTTCATCTATAGCAGATTTCCGTCGCACTCCATCCCCAATGTCTTCAGGTAACTTGCAGCAGCATATTGAAGGACTCAGTAATGGAATTGCAAATGGCAGTAAACTAGCACGCATCCTGGCCCAGCCACCTGTAACAGCATCACACCGTATGGTCTCAGGGCTTACAAATGGAATCAATGGCAGCACTGTGGGATTAGCTCCCGTGGAACGGCTTATGTATAGGGCTGATCTCCATGTGACATCCCGTTCACCACTGCCCTTATTTAATCAGCAACATCTGGAGAATGGTAGGGCATGCAGTTCAAGTCCCAGCTCTGACAAGCGCTCCTGGAAGCAGGGTCACTTGGATGGTGGCGACACAACAGATGAAGCAGATGACTCTGGTTGTGTTGGAGGTGGAAATCAAGAAATAGATCATGCGCTTTTGATGATGGATGAAGACGGCTCCTCACCCAACAAAAGACACAAACTCTCCCCAGCACTTAACAAGGGTCTTCTGacaggtttcggaggaatcacAGGGCTGGATGGTGAAGGGGAGGGCCAGTTCATCTGCGACCAGTGTGACAAGGCCTTTTCCAAACAGAGCTCTCTCGCCCGGCACAAGTATGAACATTCTGGCCAGCGGCCACATAAGTGTGATGTGTGCACCAAGGCGTTCAAGCATAAGCACCACCTTACTGAACACAAACGTCTGCACAGTGGGGAGAAGCCCTTCCAGTGTACAAAGTGTTTTAAGCGCTTCTCCCACTCTGGGTCCTACAGCCAACACATGAACCACCGCTACTCATACTGCAAGCCCTACAGAGAATAG
Protein Sequence: MASRRKQFLVRRRPQKVDLENLSSDNVVLTSAAASVGGAGAAGDLCAPPAAAMSPDNNHNHQPLADGTSRQTEDQNCLIVSSPDEGESGRIFVGRDAGSAGLQGLLMVKVRKDAEGQNEVEVLGDESEVISTDEVPRRRQMLRRGLLGEEEEKILQEYMQRSDTAVIFPEPVEQVPLPAAGLGKAISPGSGVDGVGGGAGGAGTPGIGTDYFIKCPQCHKGYPGFQALKEHVESSHPPPSHLGGGDDVVSQPTSPVGSPAPNSSAPGVGYACSQCNTSFLHKDQLEQHELVHSPNAQVSCKVCNKTFANVYRLQRHMISHDESAVLRKFKCPECEKAFKFKHHLKEHIRIHSGEKPFECANCGKRFSHSGSYSSHMTSKKCLVMNLKVGRGGRGGPNSLLDKCPPHHRGAGHASKRSLTNNSPLNSNTSNATTSSNMTNNTFPPILPKYGDTFLSAVTPRIPSRYSTSHPHPPTPSLHPFYMAVAPTMHLNPNPNSGINSYKLPASLSNLLEHLTTSSPPHQPRLSIAECDKRMDEAVEQEKGNETANNTQNQEKKDDGGGKDTKKAAEVKEEHEDEGATDMSAPEGQYGRQDETGERESPIARSGSRNSPGCGSNSGDLEAVKRILETVNATVTKQFLEANMQKLTSSTSSGSGCPSIASASSPTGNGTESNVPEFHKKSSEFSSLYDLLSCRHCQKKFRSPIDLHQHERYLCEHGAGDRRSEGLAAKLEDAVTVKTEEMSLNGGCSGSEDGDDADGQISGKEPATEEDEYEAESVTTTDQVSEDGRKVRVRSLIADEQLAILKGHYSLNPRPKKDELARIADKIGFSVRVVQVWFQNTRARDRREGRLVHVPYVPLATVPVFPPVSLVPSSQPSHLQTMNVGHYTTTSPPLCPPSGAEQPLDLSTKKTQRSLASTPSSSPLRPTSATAHSDSGEDVGCAMNLSRKSSSSRSPTPNSSAMLAAPFRQLLPFHQSHYPHSSCSSSSIADFRRTPSPMSSGNLQQHIEGLSNGIANGSKLARILAQPPVTASHRMVSGLTNGINGSTVGLAPVERLMYRADLHVTSRSPLPLFNQQHLENGRACSSSPSSDKRSWKQGHLDGGDTTDEADDSGCVGGGNQEIDHALLMMDEDGSSPNKRHKLSPALNKGLLTGFGGITGLDGEGEGQFICDQCDKAFSKQSSLARHKYEHSGQRPHKCDVCTKAFKHKHHLTEHKRLHSGEKPFQCTKCFKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01566873;
90% Identity: iTF_00396196;
80% Identity: iTF_00396196;