Basic Information

Insect: Cryptotermes secundus
Gene Symbol: Prdm15
Assembly: GCA_002891405.2
Location: NW:190457-210224[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.024 0.68 10.0 2.7 2 23 274 296 273 296 0.91

2 18 0.00012 0.0035 17.2 3.3 1 23 692 714 692 714 0.98

3 18 0.5 14 5.9 0.6 1 19 718 736 718 738 0.94

4 18 0.17 4.8 7.4 1.2 2 23 753 774 752 774 0.94

5 18 0.18 5 7.3 2.4 2 21 779 798 778 799 0.93

6 18 0.0026 0.073 13.1 2.3 1 23 806 828 806 828 0.97

7 18 0.53 15 5.8 0.4 1 21 832 852 832 853 0.91

8 18 0.0028 0.081 12.9 1.3 3 23 868 888 866 888 0.94

9 18 4.3 1.2e+02 2.9 0.4 1 12 892 903 892 904 0.93

10 18 0.049 1.4 9.0 0.3 2 23 918 939 917 939 0.95

11 18 4.8 1.4e+02 2.8 6.9 1 21 944 964 944 965 0.94

12 18 0.0075 0.21 11.6 0.1 2 23 1019 1040 1018 1040 0.96

13 18 0.0041 0.12 12.4 4.0 1 23 1045 1067 1045 1067 0.96

14 18 0.0011 0.032 14.2 1.8 2 23 1073 1094 1072 1094 0.96

15 18 7.2e-05 0.002 18.0 0.9 1 23 1100 1122 1100 1122 0.96

16 18 1.9e-05 0.00055 19.8 1.9 2 23 1131 1152 1130 1152 0.96

17 18 0.014 0.39 10.8 5.5 3 23 1160 1181 1158 1181 0.95

18 18 0.005 0.14 12.2 1.8 1 23 1186 1209 1186 1209 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.024	0.68	10.0	2.7	2	23	274	296	273	296	0.91
2	18	0.00012	0.0035	17.2	3.3	1	23	692	714	692	714	0.98
3	18	0.5	14	5.9	0.6	1	19	718	736	718	738	0.94
4	18	0.17	4.8	7.4	1.2	2	23	753	774	752	774	0.94
5	18	0.18	5	7.3	2.4	2	21	779	798	778	799	0.93
6	18	0.0026	0.073	13.1	2.3	1	23	806	828	806	828	0.97
7	18	0.53	15	5.8	0.4	1	21	832	852	832	853	0.91
8	18	0.0028	0.081	12.9	1.3	3	23	868	888	866	888	0.94
9	18	4.3	1.2e+02	2.9	0.4	1	12	892	903	892	904	0.93
10	18	0.049	1.4	9.0	0.3	2	23	918	939	917	939	0.95
11	18	4.8	1.4e+02	2.8	6.9	1	21	944	964	944	965	0.94
12	18	0.0075	0.21	11.6	0.1	2	23	1019	1040	1018	1040	0.96
13	18	0.0041	0.12	12.4	4.0	1	23	1045	1067	1045	1067	0.96
14	18	0.0011	0.032	14.2	1.8	2	23	1073	1094	1072	1094	0.96
15	18	7.2e-05	0.002	18.0	0.9	1	23	1100	1122	1100	1122	0.96
16	18	1.9e-05	0.00055	19.8	1.9	2	23	1131	1152	1130	1152	0.96
17	18	0.014	0.39	10.8	5.5	3	23	1160	1181	1158	1181	0.95
18	18	0.005	0.14	12.2	1.8	1	23	1186	1209	1186	1209	0.95

Sequence Information

Coding Sequence: ATGCAGAAATATCTTCTTGCAGgtTGCAATGTTTGCGGCCGTAACCACACGACAGAATTGTGCTCATTTCTTCGAGAACTTAAACCTGTTGAGGATACAAAGACTCCATCCCGAGCCAGATTGACTTTGCCTGCTAATTTGGAAGTACAGAATTTGGCTGATAACTCAACGACAGTTGTAGCCAGAGCACCATTTGTTCGAAGTGTTCAGTTTGGACCATTTATAGCCAGACATACACAAATGCTACATCCTGCTGTCAACTTTCCAttaaagGTCTTTGGTAAAACTGAAGAAACTAGTTATTATCTGGATACAAGTGATGAGGAGGCTTGCAATTGGATGTGTCTTGTTGCACCAGCCACTTCCTGTAAAGAGCAAAATCTTATCTGTTATCAGATAAACATTTGGCTTGGTTTTCAGATGGGTCAAGATATATATTACACTGTGATGAAAGATATCCAAGCTGGTGAGCAACTGAAAGTTTGGTATGCGCCTTACTACGCTGTAAAAATGGGAGCAGTGCCTTTCAGTACAGACTTCACAGCAGATgcaaATGGAGACAAGAGTACAGACCATGTTTATGAGTCAAAGCAGAAGCTCagagagaaggaaaagaagaatttCCATGGGATGTTGCTAAGTCGTGAAGTGACTCAGAAGTTGGCGGAACAGTTGCCAGCCAGACAGCTTGGTGCCAGGCAAACACCTGACAGATGGCGCTGTAAACTTTGCTGTGCCGAAGAAACCAGTGTTATATTATTTGCTAGACATCTCATGTCCCACTACAAGCGGTCGGTTGGTCATTCAGGGCGGTTACTGGAATGTCACTTGTGTCATCAGAAGTTTGCAACTGAAAAGTTGCTAGTTAAACACAAAGTTATTCGACACAAAATGGTTCTTCAGAGACCACGATTATTGGGTGATAtagaagaagatgaatcagctgGTGTGGACATGGCAGAGGAAGAAAACGATGATATGTTAGAAGATCGTGATGGCAAGGTGACAAGCATTGTGATTGCAAATCTCACTGGACAGCTACCATCACATTTCTCTCAGCCAGGTTCACAAACAATATTTGTAACAAATACAGGACGGTTATTAACAGATGGTATGGCAGATAGCGAACTTCAAGAGAGGCAACATGAAGCCTTGAACGTACTTCTTGAACAGTTACAATCAACTGACACGTACCAAGATGGCAATGAAGTGCAGTTTGGTCCAGAAACAGTTGATTACTATACTAATAATGAGCTTGAGAgcacaaataaatgtaaagtaCCCCAGAAAATAAACAGCAGATGTAATGTccttaaaaacaaaacacaggagAATGTTTCAATCCTTCAAGATGGCCTGGAAGAGAAAGATATGAACCTTGTTCTTAATGACACAAATGTGGCATCTCAGTTTGAGACAAtgcaggaagaagaagaagatacagGACCAGGTGGCATTTTGACCGAATATAAACCCGAGACTGCCACAGGTTTAGCTCTTAATCATCAGCAAAATAATAGagaaaatattataaacattatAAATACTCACGTGACCATCATTCACAATGGTAGTATGATGAGCAGTGATGACCAGTCAGAATCTGCTCATACTGATGATGTGAGGAACCCAGTAGATAAGCCCAAGGTTCATAATACTAGTATATTTGAAGAATTTCAAACAAGTAATGTTGTACCAGAGGAAATGGTTCCGAAACCCAGCACTGCTCTTGGAGTTGCATATCAGACTGGGGCTGATGCATCTGTGAGTCTACAAGCAGGAAGCACTAGTGATGAGCGCTGTGTAATTAATCCTGATGACTTGGAAACTGTTGCTACATCAAGTGAATTGAGTCTCCCAGTGGGGCAGGAAGACGTGTCTTCTGCATTCTTAGGTTTAGTTTCAGAGCCAGATATTGATACAGCAGATGCGCAGAATCTAGATAAACACGCAGGAAGTGCCGAGGGACAGGATGACATTTCATTATCAGCCAGTTTTGATTTGAATGATGTTTCAGATGGGACATCTCTGTTGCCTGCCGATAATGCAAAAACAGTGGATCTGGGTCCGCCATACAACtgtgatatttgtaataaaGAATTTCACAAAGCCGATTACTTGTATCGCCACTTGCGTAAACATACTGGCGAATTTATGTGTGTCTCCTGTTTAGCTGTGTTCGCTCGTAAGGAGAGCCTTACAAACCATTCATGTTTTGCTGATGCTTCAGGGGTGAATGAAGAAACATCTTCTCTTATCTGTCCGTATTGCCAGAAGAAATTTCTAGTGAAGAAGATTTTTAAGAGGCATATGGCAAAACATACAGGGGAATGGAAGTGCAACAAGTGCCAGCGACTGTATTCTTCAAGAGCTACTTTGTCTTCACACCGGTGTTCAACAAAGCCAAACCCAGTATACCCATGTCACGTATGTAAGAGAGAATTCCTGCGACGCTCCTACTTGGATAAACACATGCTTCTGCATCTAGAGAATCACCCATGCACTGTGTGTGGCAAGAAGCTGCAGTCTGGCAAAGTGCTACAGAATCATCAGAATTACTGCAGAAGGGGAAAACAGCTGGAGACAGTTGGTGAGACAGCGTGTCCTCATTGCAACATTACTTTCTCACAGCTTGTTACTTTCAGGCAACATGTGTACCAACATATGTATCCATATATGTGCCAACAGTGTGAGGAACGCTTTAGAACAGATCCAGTGAAGGTTTTGCACACTTGTTCAGAAACTGTACTCAATTGTGAAATGTGCACGGAGCAGTTCTCCTCATTACTGAgcctgtcacagcatcaagtaATACATGGTGTGCCACAGTTCCACTGCTATGAATGTGGCCAGAGCTTTCATCTCTGTGAAAACTATAGTTCCCACATATGTAGTGCATGGGAAGAACCTAGAACGTCACACAGAAAGAGGAAGAAAGCTGCTGATAAGAGAGACGAAGAAAGCAAAAGTGTGCATGCAAGTGGGAAGGGAGAAATGAGTGAAGTGCTTTCGcaaaagaagagaaatgctgaTGATAGCAGTCAGTCGGGAGTAGTGTGTGATGTCTGCGGCGAGGTGTACAAGACAATCCATATCCTGAAAGCACACATGCAGCTACATGGGGAGCGCAAGTTTGCCTGTCAGATTTGCAACAAGAAGTTTCATCGTAAAGACGTGCTGCAGGAGCATCATTCTGTGCATCAGGAGGCCCACATACCCTGCCCTCTCTGCAACAAGAAGTTGAAGACCAAGAAGTCCCTAGATGTCCACATGCACCGTCACACAGGCATCAGGCGATATTCTTGTATGGACTGCGACAAGAAATTTTTCCAGAAGGGCAATTTGCTGAAACATGCTGTTATGCATAATCCAAATGCCAAAATGATTCTGACGTGTGATCATTGTAATAAGAATTTCACGTCAAGGGACTATCTCGCCCAGCACATGCTAGAACATACACAAGGACGTATTCACTTATGCCATCTGTGTGACAAGGGATTTGTTAAGGAGCATATGTTGAAAGGTCACATCAGAAAATTTCATAGTGGGCACATATTTGTATGCCCATATTGTAATATGTCTGTTCGTCATCGCAATTCAATTCGACGTCATCTCGAAAATCGCCACGGTGAACTTCATCAGGAATGGGCCACTCCAGGATTCCTTGATAAACTTCAAGCAGGTGGTAACAGTGCTCCAGCTAGCATGCTGCTGAATGCCAGTCTAGTGGCTGCACATCCCCAGTCACTGAGTGATGGCAACACTGCAGTAACAGCTGCACAAACATCACAGCAGATAAATCCCAACATGGCCCAGACTGACGATCAAACTGAAGGAGCAGAGATACTGTTAACTGTATCTGGCATGCCTCTCGGTAGCGCAGATGGTGAAGTGGGGACAGCAGTGGCTCAGAGTGCAGTTGGTGACCATATGGAACTCCAGGTGGAAACAGCGATCCAGGGTGACCAAGTAACAGCAGGCAGTACATTCATTTTCTCAGACGGGACGGTTGTGCAGCAGGAGGATGGGACTGGCAGAGGAGATATTCTGCTGTATGTCCTCGACCCTACAGATGTCACCATCGATCCTGGAtactaa
Protein Sequence: MQKYLLAGCNVCGRNHTTELCSFLRELKPVEDTKTPSRARLTLPANLEVQNLADNSTTVVARAPFVRSVQFGPFIARHTQMLHPAVNFPLKVFGKTEETSYYLDTSDEEACNWMCLVAPATSCKEQNLICYQINIWLGFQMGQDIYYTVMKDIQAGEQLKVWYAPYYAVKMGAVPFSTDFTADANGDKSTDHVYESKQKLREKEKKNFHGMLLSREVTQKLAEQLPARQLGARQTPDRWRCKLCCAEETSVILFARHLMSHYKRSVGHSGRLLECHLCHQKFATEKLLVKHKVIRHKMVLQRPRLLGDIEEDESAGVDMAEEENDDMLEDRDGKVTSIVIANLTGQLPSHFSQPGSQTIFVTNTGRLLTDGMADSELQERQHEALNVLLEQLQSTDTYQDGNEVQFGPETVDYYTNNELESTNKCKVPQKINSRCNVLKNKTQENVSILQDGLEEKDMNLVLNDTNVASQFETMQEEEEDTGPGGILTEYKPETATGLALNHQQNNRENIINIINTHVTIIHNGSMMSSDDQSESAHTDDVRNPVDKPKVHNTSIFEEFQTSNVVPEEMVPKPSTALGVAYQTGADASVSLQAGSTSDERCVINPDDLETVATSSELSLPVGQEDVSSAFLGLVSEPDIDTADAQNLDKHAGSAEGQDDISLSASFDLNDVSDGTSLLPADNAKTVDLGPPYNCDICNKEFHKADYLYRHLRKHTGEFMCVSCLAVFARKESLTNHSCFADASGVNEETSSLICPYCQKKFLVKKIFKRHMAKHTGEWKCNKCQRLYSSRATLSSHRCSTKPNPVYPCHVCKREFLRRSYLDKHMLLHLENHPCTVCGKKLQSGKVLQNHQNYCRRGKQLETVGETACPHCNITFSQLVTFRQHVYQHMYPYMCQQCEERFRTDPVKVLHTCSETVLNCEMCTEQFSSLLSLSQHQVIHGVPQFHCYECGQSFHLCENYSSHICSAWEEPRTSHRKRKKAADKRDEESKSVHASGKGEMSEVLSQKKRNADDSSQSGVVCDVCGEVYKTIHILKAHMQLHGERKFACQICNKKFHRKDVLQEHHSVHQEAHIPCPLCNKKLKTKKSLDVHMHRHTGIRRYSCMDCDKKFFQKGNLLKHAVMHNPNAKMILTCDHCNKNFTSRDYLAQHMLEHTQGRIHLCHLCDKGFVKEHMLKGHIRKFHSGHIFVCPYCNMSVRHRNSIRRHLENRHGELHQEWATPGFLDKLQAGGNSAPASMLLNASLVAAHPQSLSDGNTAVTAAQTSQQINPNMAQTDDQTEGAEILLTVSGMPLGSADGEVGTAVAQSAVGDHMELQVETAIQGDQVTAGSTFIFSDGTVVQQEDGTGRGDILLYVLDPTDVTIDPGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -