Basic Information

Insect: Cryptotermes secundus
Gene Symbol: ECU06_1150
Assembly: GCA_002891405.2
Location: NW:465659-471169[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 41 4.4 1.3 1 23 646 669 646 669 0.95

2 14 1.5 42 4.4 1.0 1 23 778 801 778 801 0.88

3 14 0.0018 0.05 13.6 0.1 2 23 810 831 810 831 0.97

4 14 2.9e-05 0.00083 19.2 1.4 2 23 834 855 833 855 0.97

5 14 5.6e-05 0.0016 18.3 1.9 1 23 861 883 861 883 0.98

6 14 5.4e-05 0.0015 18.3 4.3 2 23 890 911 889 912 0.94

7 14 0.63 18 5.6 3.0 5 23 925 943 924 943 0.96

8 14 0.00018 0.005 16.7 3.7 3 23 950 971 948 971 0.95

9 14 0.00091 0.026 14.5 0.1 2 23 987 1007 986 1007 0.97

10 14 1.5e-05 0.00044 20.1 2.1 1 20 1013 1032 1013 1035 0.92

11 14 0.015 0.42 10.7 4.2 1 23 1043 1065 1043 1065 0.98

12 14 0.044 1.3 9.2 8.6 1 23 1071 1093 1071 1093 0.98

13 14 3.6e-05 0.001 18.9 2.9 1 23 1099 1121 1099 1121 0.98

14 14 0.0032 0.092 12.7 5.4 1 23 1127 1149 1127 1150 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	41	4.4	1.3	1	23	646	669	646	669	0.95
2	14	1.5	42	4.4	1.0	1	23	778	801	778	801	0.88
3	14	0.0018	0.05	13.6	0.1	2	23	810	831	810	831	0.97
4	14	2.9e-05	0.00083	19.2	1.4	2	23	834	855	833	855	0.97
5	14	5.6e-05	0.0016	18.3	1.9	1	23	861	883	861	883	0.98
6	14	5.4e-05	0.0015	18.3	4.3	2	23	890	911	889	912	0.94
7	14	0.63	18	5.6	3.0	5	23	925	943	924	943	0.96
8	14	0.00018	0.005	16.7	3.7	3	23	950	971	948	971	0.95
9	14	0.00091	0.026	14.5	0.1	2	23	987	1007	986	1007	0.97
10	14	1.5e-05	0.00044	20.1	2.1	1	20	1013	1032	1013	1035	0.92
11	14	0.015	0.42	10.7	4.2	1	23	1043	1065	1043	1065	0.98
12	14	0.044	1.3	9.2	8.6	1	23	1071	1093	1071	1093	0.98
13	14	3.6e-05	0.001	18.9	2.9	1	23	1099	1121	1099	1121	0.98
14	14	0.0032	0.092	12.7	5.4	1	23	1127	1149	1127	1150	0.95

Sequence Information

Coding Sequence: ATGGAGAATGGGGTGAGCCCTGTTTCTTGTCCCGTGTGTACACTGTACATGCGGGAAGGAGTTACATTACAAAGCCATCTTGACACCCACCCCAAGGATCAAGTGATAGCTGCACTGGTAAGGATTTCTGCAGGAGACATCACTGGTAGAAAGGAAAACCAGAGTGACACTGAAGCATTACCAACTGCCACACCTGAAGTTACCCGTAGCGGTCAGGAACCAATATCAGGTTTTCAGTGCTTCTCACCTAGCAGTAGTCATTTCACAACAGCCATAACATACCAACATTTCCTTAGCAGCAATGGTTTGGCCTCAAATTCCATCATCCCACAGTATGCCTCCATGCCTACCATACTGTCGGCACCCAATGGCAGTCAGTCAGCTGCTTTCATGCAAATGATGTACAATCCATACGTGgttcagcagcagcaacaacaacaacaacaacagtttCAGTTGCTCAGCTCAGTGACTTCCCCATCACATCAGCAGCCTTTCATGCGCCATGTGGTCCCATCTTATCCCACTCATGTTACCCAGCCACAAATGAACCTTGCTTCCACGTCAATTCCTCTCAGTGTTCCATATCAGACGAGTGACTTTCCTCCAGACTGTGCCCCACAAGGATTGCAGAATACAAGTAGTGTAATATCTTCATCAGTTCCTCTACCAGCTTCCTCTGCCAGCTCTTTTTCTCCTTCCACATTGTCATGTCCCATATCCTCTGCAAGCTATTTGTACCCCTCAGCGAGGGAGCAGACTCCTAATGAACAAGGTACCATAAACAAACCAAGATCACCACCATCTGATCAACACAGAAACATTTCTGTTTCAAATGGTATACCCCCATGTTCAAAGCAGCAGCTTGAAGAAGAAACTATTATAGCAGATGATCCTGAAAAAGATTCATTTCCAGATAGGAATTTGCCCAGTAGCACATGTGATGTTGGTGCAGCCTACAGTGGTgtggcaacgcaaacaagcgACCCTCAATATGAGGAGGAGGATCAGAAGAGTCCCTGTATGACAAAGGATGAAGAGGCAGCTGTTACTCTAGAAGATGCAGCTGGTGATCTGCAGCAGGAAATGCTGAGGAATGAATCTGTGAATGTGAGGGTGCGGAAGGACCTGAATGATGTGGCTGTTAGTCCCATGGTGCAAGCACGTGATTCTGGGTCTGAGGACAACACAGAGAATGAGTATATTGATGTAAGAAATGAAGACATGtcacagatatcaggtattatTAGGAATGCTCTAAGAATCCAGCCACCTCCTGTTAGTGTAGAAGACAGTGATGAGTACATCACATCTGACAGGCAGTTTTCTGGGCAGGGTGACACTAGTAAAGAAGAGGCAGCTGTAAAAGAGATGACAGAAGGGGTTGAGGACAATTGTGAGAAACCCGAGGAGCCAAATGAGGAAGGTGCTAACAGATTTCTGGATATAGATTCATCCGAGCCTCTTAACATAATTGAAATTGATGGGATTCAGATCCTTGTGCCATCACACTTCCTGAAAAATCCATCCTCGATGTTGGAGGGCAAGCTTCCTGCAGATGATTGCCCGGCTTCCATGCCACTTGGGTTGTCCATTCCTACTGAAGGAGAAATACAACAGCCCAGAGAGACAGAGTCAGAAGCAacgtcagtgccaagtttgaaCATCCAAACAGATGAAATGATGCCACCTAGAGGAGAACTGTCTGAGCAGGAGAGTGTGGGGGGCAGCGACAGTTCTGTGTGGGTGCAGGCATTTCAACAGAAGGAAGTGTCAACATCATATGACCTGCTGGCCAAGGAGAGTTGGGAGGCTTCAGATGGTTCAGATGCAGACGTCATTCTGGAGAACGAGGCAACTGCATCTGCTGGGGAGAAGCGTGACAGATCTGGGACAAGTGGCCAAGAGAAGAGGAAGATGAGGGCAGATAGGGTTTATAAATGTGGAGCATGTGGGGAACCATTCAACTGTCCCAAGGAACGGCGTGTTCATAGAAGTACTTATCATTCTGATAAGAGCGGAAGCAGTGAAACAGTGGCCTCAGCAAATGAGGGTAAAATTAGTGTGGATATAGTGTCAAGAAAACAAGCTCATAAGCAAAAAGCAAGAGTTAAGAAGGTgataaaggaagaagaagataagTCTTGTGTGAAGACAGAAGGGCCACAGTTCATGGAAGTGTTCCTTGAAGAAGATACCGAAaccaagatggaggcagaagatgGATCTGAAGAAGGAGAAGGGCTCCCAGAGAATGTGTCTGCTACACCTGATAAAGCCGAGGCTGCAGAACTGGTAAAACAAGAACCTGTACTAGAAGCAGCTGCCATCTATCGTTGTAGCATGTGTACAGAACTATTTACATCTACTAAGTTGCGGAGTGATCATGAACTCAAGGTCCACAAGAAGGCTAAAGACAAAAAGAATGAATGTGCCACGTGCAAAGAAGTCTTTACTAATGATGGTGAATACCAAGCCCATCTTCAGACACATCCTCTTGAATGTTCACAGTGCGGAAAATATTTCTATAGACGTCAGAACCTCGAACTACACTTGAAACGACATCTAGGTATCAAGCCCCACAAATGTACTGTATGTGACAAGGCATTTGTAACAAAACAGAAGCTGGCAGAACACACCAACTCTCACACAGGCAATGCACCAATCAAGTGCCCCCTGTGTGACGAGACTTTCAGGAGGTACAGCAACCTCATCCAGCACAAGCACCGACATCACATGAACGTTAAGAAGAAGGTGAGGGACTTCATCTGCCACTGTGGGGAGATATTCCACTCAAAGAAAAAGCTGGAGTGGCACAAAGAAATTCATGAAGAGAAGCCAAAATGTTGCACCTACTGTAGCGAGCGCTTTGTTCATGCGGCGAGTCTCACAAGACACATTCGCAAAGCTCACGATTGTCGTTATGTGCCAAAGTGTGGGCGTGAAGTGGAGAATGTGGAGTGCAAGGTGTGTGGATATGTATTCTTAAAAAGTTCGATGGCAGTACACATGCGCATGCACAGTGGTGAGCGTCCATATTCATGTCACGTGTGTGGGAAGAATTTCAGCACCAAGTGGAACCTGCAGCTGCATCGGTGGACTCATGCAGCACGCAGTTCGAAGCCCTTCAAGTGTTCCTTGTGCAAGAGTGCATTCTTTCGTCGTAACGATTACACTGCACATATGCATTCACATCGCAATGTCCGGCCATACACTTGCAATCACTGTGGTTGTCAGTTCATTCGGAAGTATAACTGCCTGCGCCACGTGCGGGAGCACGAAGTTGGCAAGTCATTCAGTTGTAATGTGTGCGGGAAGCTGTTTCACCGCAGTTATTACCTGAAGGAACATTTACGTGTGCATAGTGGGTCTCGTCCATTTGCTTGCCACATCTGTGGGAAGGCTTCCAGCACCAAGTCAAACCATAATAAACATGTGAAAATTCATCACGCTCGAGAACCAGTTAATACAGAGGGCTAA
Protein Sequence: MENGVSPVSCPVCTLYMREGVTLQSHLDTHPKDQVIAALVRISAGDITGRKENQSDTEALPTATPEVTRSGQEPISGFQCFSPSSSHFTTAITYQHFLSSNGLASNSIIPQYASMPTILSAPNGSQSAAFMQMMYNPYVVQQQQQQQQQQFQLLSSVTSPSHQQPFMRHVVPSYPTHVTQPQMNLASTSIPLSVPYQTSDFPPDCAPQGLQNTSSVISSSVPLPASSASSFSPSTLSCPISSASYLYPSAREQTPNEQGTINKPRSPPSDQHRNISVSNGIPPCSKQQLEEETIIADDPEKDSFPDRNLPSSTCDVGAAYSGVATQTSDPQYEEEDQKSPCMTKDEEAAVTLEDAAGDLQQEMLRNESVNVRVRKDLNDVAVSPMVQARDSGSEDNTENEYIDVRNEDMSQISGIIRNALRIQPPPVSVEDSDEYITSDRQFSGQGDTSKEEAAVKEMTEGVEDNCEKPEEPNEEGANRFLDIDSSEPLNIIEIDGIQILVPSHFLKNPSSMLEGKLPADDCPASMPLGLSIPTEGEIQQPRETESEATSVPSLNIQTDEMMPPRGELSEQESVGGSDSSVWVQAFQQKEVSTSYDLLAKESWEASDGSDADVILENEATASAGEKRDRSGTSGQEKRKMRADRVYKCGACGEPFNCPKERRVHRSTYHSDKSGSSETVASANEGKISVDIVSRKQAHKQKARVKKVIKEEEDKSCVKTEGPQFMEVFLEEDTETKMEAEDGSEEGEGLPENVSATPDKAEAAELVKQEPVLEAAAIYRCSMCTELFTSTKLRSDHELKVHKKAKDKKNECATCKEVFTNDGEYQAHLQTHPLECSQCGKYFYRRQNLELHLKRHLGIKPHKCTVCDKAFVTKQKLAEHTNSHTGNAPIKCPLCDETFRRYSNLIQHKHRHHMNVKKKVRDFICHCGEIFHSKKKLEWHKEIHEEKPKCCTYCSERFVHAASLTRHIRKAHDCRYVPKCGREVENVECKVCGYVFLKSSMAVHMRMHSGERPYSCHVCGKNFSTKWNLQLHRWTHAARSSKPFKCSLCKSAFFRRNDYTAHMHSHRNVRPYTCNHCGCQFIRKYNCLRHVREHEVGKSFSCNVCGKLFHRSYYLKEHLRVHSGSRPFACHICGKASSTKSNHNKHVKIHHAREPVNTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -