Csec007778.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptotermes secundus
Gene Symbol
zfy1
Assembly
GCA_002891405.2
Location
NW:1035985-1044657[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 9.8e-06 0.00028 20.7 1.0 1 23 279 301 279 301 0.98
2 16 0.001 0.03 14.3 2.5 2 23 311 332 310 332 0.97
3 16 4.1e-05 0.0012 18.7 2.5 1 23 338 360 338 360 0.98
4 16 0.061 1.7 8.7 3.1 1 23 365 387 365 387 0.98
5 16 0.0074 0.21 11.6 0.1 2 23 394 415 393 415 0.96
6 16 0.021 0.59 10.2 5.0 1 23 421 443 421 443 0.93
7 16 0.00017 0.0049 16.8 1.9 1 21 448 468 448 470 0.94
8 16 0.00026 0.0075 16.2 0.1 1 21 476 496 476 497 0.95
9 16 1.2 34 4.7 0.2 3 23 504 525 499 525 0.92
10 16 2.1 61 3.9 0.5 2 23 544 566 543 566 0.92
11 16 0.19 5.4 7.2 1.8 1 19 572 590 572 590 0.93
12 16 0.059 1.7 8.8 0.5 3 23 611 632 610 632 0.97
13 16 0.0035 0.1 12.6 2.3 1 23 638 660 638 660 0.97
14 16 0.014 0.39 10.8 3.2 1 19 666 684 666 689 0.92
15 16 9.7e-05 0.0028 17.5 2.6 1 23 695 717 695 717 0.98
16 16 0.00015 0.0043 17.0 0.2 1 22 723 744 723 744 0.95

Sequence Information

Coding Sequence
ATGAGGGAAGGTGCAACATTACAGTCTGCTGACCATACATATTGCAGAAATTCAAATGAACTTTCTTTAAGCAATATCACTATTGAGAAAACAGTCTCAGATGGGAAGCTGAAAGAAGACACTTCTGGAAGGGGAGAAATTCCAAAGAGCGGAATATTTTTGAAAGTGTATATAACAGAGAATCTTGCAGGTCAAGGGAATCAAGAAGAAAAACACAAGAGAACTGCAAATGGGATGAATCATCCCTACACAGAAGCAGTATTTTCTTGGAAAAGAATTCCTTCTCAGATATGCAGACTGTGTGCATGTACAAATGAACTACATCCAAAACAGTCTATTATTGGTTGGTTGAGTTTGCTGAATGAAATACTACCTGGCATGGTATCATTGAACGATGGACTTCCTCAACACATGTGCAGACCATGTGTAAACAAGCTGTATACATGTAACAAAATAAAGACAGAATTTATTGAAGCAGATGAAAAACTTCAAGGAATCATGGGATTTGTAAAGTCTGCAGGACTTACTACTGAAACTGACAACAGAATTCATAAGGATCCAAGTGATAATGAAATGTATGGAGATGGGGCTTTCACTTGTCATCTCAGATTTGATAAAATAAAGGAATCTGAGTGTGCATTTGAAGACAGTTGTAATCTTGAGCACTACAGTGAAATTCATgaaatatctttaaaaaatgAATGTGGTTCATATAGTATGTTACAAGGGTCAGTCGCTAAGCGAGATGATCAAGAGGTACAGAAAAACTTGTGTTTTAATAATAAGAGGTCCTCTGAAGCCTTGAAGCTTCGGAAGAATAaagtaaaattgaaatattcatgTGTTGAATGTAAAGAAATGTTCTCTTCAAAAAAGAATTTGAGTGCACATAAACGGGTACATTCAAAACCAAAAAATCTAAGCGAACTTGTATGTAAATACTGTGGCAGACAGTTCTTACAAAAACACAAATTACTGGTCCATCTTCGGTCCCATACAAATGAGAAGCCTTTCATGTGTGAACATTGTGGACAAGTTTTCCGAATCAAGGAGAGTCTTAAGAATCATCGACTGAAACATAACCCTCCCAGTTTTTCCTGCCTTGTTTGTAGTAAAAGGTTTTATTGTCAGGCCAGTTTGGCTGTGCATAAGAAGACTCATCTTACAGACAGCAGACTAATTTGTGACTTGTGTGGGAAAATTCTTTCCTCCAAATTTATTTTGGAATCTCACATACGCTCTCACCAAGGAGAGAAACCATATCAGTGTACGGTTTGCGGCAGATGTTATTCATCAGCAAATGCACTTAGGTGTCACAAGTATAGTCATTCAGCTAAAACGTTTGCTTGTGAAATATGTGGAAAAAGCTTCAAATACAAGAGGGCTGTAACAGAACACATGAACTGCCACACTAAGCAGAAAACGTATGAATGTCCGATTTGCTTGAAAGCTTTTGCAAATAAAGGGAACAAGTGGAGGCATCTGAAGGTAACGTGTAAAAACATTCTTTGTGTTGTGTGTAATCAGACTTTTCCAAATATTGGCATGGTGGTGGAACATAGAGCCAAGGTGCATTCCCTGGAGGAGATTGCAAATGCTGCAGAAGAGTACAGAATGGAACAAATTCTACATTGTGAAATGTGCTTAGTGAGTGTAGCAGGGACAAATAGTATGCTGAAACATATGAAGACAGCACATAAAACATATGAACTTTTTACATGTGAACAGTGTAATAGGTGCTTCTTAAATGAGGAACTACTACTGAAACATGATACTCCTTGCAAGTTGAAGAAGGTGGTGTCAAATTACTTGAAAGGTCCACGTGGACATTGTAAAATTTGTTCTGAGCCTATATCTGGAATAGGAAACATGATGAAGCATATGAGACGGGTTCATAAGGAATATAGGCCATTCATGTGTGAGCACTGCCCAAAATCTTTCCTAACTAAACAGGAACTAGGACAACACAGTAGAAGTCATAGTGATCGTCGTCCATTCTTGTGTTCTATCTGCCATGCCAAATTCAAGTCTAAACATTCTCTTCAATGGCATGATATTTCATTTCATCGAGATGTGTTCCCTTTCTCATGCCTTTCTTGTGATCGTAAGTTCAAACGGCAGACATCTTTGGTTATACACAAGAGGACACACACGGGGGAGCGCCCTTATCCTTGTTCTCTTTGTGAAAAGTCTTTTGCTAATAAAATTGACATGCAAAGACATACCAACACACGTTCCTGCATAAAAAAGTAA
Protein Sequence
MREGATLQSADHTYCRNSNELSLSNITIEKTVSDGKLKEDTSGRGEIPKSGIFLKVYITENLAGQGNQEEKHKRTANGMNHPYTEAVFSWKRIPSQICRLCACTNELHPKQSIIGWLSLLNEILPGMVSLNDGLPQHMCRPCVNKLYTCNKIKTEFIEADEKLQGIMGFVKSAGLTTETDNRIHKDPSDNEMYGDGAFTCHLRFDKIKESECAFEDSCNLEHYSEIHEISLKNECGSYSMLQGSVAKRDDQEVQKNLCFNNKRSSEALKLRKNKVKLKYSCVECKEMFSSKKNLSAHKRVHSKPKNLSELVCKYCGRQFLQKHKLLVHLRSHTNEKPFMCEHCGQVFRIKESLKNHRLKHNPPSFSCLVCSKRFYCQASLAVHKKTHLTDSRLICDLCGKILSSKFILESHIRSHQGEKPYQCTVCGRCYSSANALRCHKYSHSAKTFACEICGKSFKYKRAVTEHMNCHTKQKTYECPICLKAFANKGNKWRHLKVTCKNILCVVCNQTFPNIGMVVEHRAKVHSLEEIANAAEEYRMEQILHCEMCLVSVAGTNSMLKHMKTAHKTYELFTCEQCNRCFLNEELLLKHDTPCKLKKVVSNYLKGPRGHCKICSEPISGIGNMMKHMRRVHKEYRPFMCEHCPKSFLTKQELGQHSRSHSDRRPFLCSICHAKFKSKHSLQWHDISFHRDVFPFSCLSCDRKFKRQTSLVIHKRTHTGERPYPCSLCEKSFANKIDMQRHTNTRSCIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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