Csec001286.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- ZFY
- Assembly
- GCA_002891405.2
- Location
- NW:525716-543912[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.67 19 5.5 4.2 1 23 185 208 185 208 0.95 2 24 0.0017 0.049 13.6 0.7 2 23 217 239 217 239 0.93 3 24 0.37 10 6.3 0.5 3 23 248 268 246 268 0.96 4 24 0.0002 0.0057 16.5 1.7 1 23 301 323 301 323 0.98 5 24 0.79 23 5.2 1.9 2 23 327 348 325 348 0.96 6 24 0.057 1.6 8.8 0.1 2 23 426 448 425 448 0.96 7 24 0.014 0.4 10.7 1.4 2 23 453 474 452 474 0.95 8 24 0.99 28 4.9 0.6 2 10 493 501 492 511 0.92 9 24 0.64 18 5.5 6.4 1 23 524 546 524 546 0.96 10 24 0.42 12 6.1 0.3 2 23 554 575 553 575 0.92 11 24 2.8e-05 0.0008 19.2 2.6 2 23 580 601 579 601 0.96 12 24 0.02 0.56 10.3 1.0 1 23 610 632 610 632 0.99 13 24 0.001 0.029 14.4 1.0 1 23 638 661 638 661 0.97 14 24 0.007 0.2 11.7 0.5 1 23 669 692 669 692 0.94 15 24 0.0023 0.065 13.2 0.2 1 23 698 721 698 721 0.95 16 24 0.055 1.6 8.9 0.4 1 23 941 964 941 964 0.94 17 24 7.8e-06 0.00022 21.0 2.8 1 23 1145 1167 1145 1167 0.99 18 24 1.3e-05 0.00038 20.3 4.3 3 23 1175 1195 1173 1195 0.98 19 24 0.026 0.75 9.9 2.0 1 23 1201 1223 1201 1223 0.98 20 24 0.00047 0.013 15.4 0.8 1 23 1229 1251 1229 1251 0.98 21 24 0.00053 0.015 15.2 0.2 1 23 1257 1280 1257 1280 0.86 22 24 0.00091 0.026 14.5 3.0 1 23 1289 1311 1289 1311 0.97 23 24 0.0005 0.014 15.3 1.8 1 23 1317 1339 1317 1339 0.97 24 24 0.048 1.4 9.1 0.2 2 19 1347 1364 1346 1369 0.94
Sequence Information
- Coding Sequence
- ATGACAGCTGTTAAAGGACTAGATAACATGATCGCCAACCCAGGCTGTAATGTTCAGTCTGGTGTTGTTCTGCTCACTGGCTTACCAACGAATTTCTTTAACGAAGAAGTACCAACATTAATTTTGAGGACTCAACAAGACACACTAGGTGCTCAGGCACAGGAAAATACGCAAGTTCAACCTAATTTAGGTTTGTATTCGATCGTTCTGGGAAGTGAATTATTAGAACCAAGCCTGCAAGAGGAAAATAGAGAATCCATCGAAAATAATAAATCTGGTGATGAGAGCAACAGTGACCAGTTGTTGAATTCAGTAAACATTCCTTCTGAACAGAACATGATCAGTGCTAGACCAGTAACACACATTGAAATTATCAGACAGAAGCCCAGTGTAGTGAAGGTGAAGCATGGTGCATCTCGTCGTGTCACTGGTGCAAACAGAGTGGTACCATTGATTACAAGCATGTGGCAGAAACGAGAGCTCAAAAGCATTGAACCATCTTTGGCAGCAACGTACAAAACAATTCTGGATGATCCAGATTACAGTGATGAACATGAATGTGAAACATGCCACAAGCAATTTCTGTCGGCCACACAGGTAGAACACCACATTAAGGAGATGCATCCTCAACAACAGGTGGTGCTAGAACAGtgCTTTGTATGCAGGAAGAAGTATGTGGTCCAGTCTCAGCTGAAGCGCCATCTATCAGCAGTTCATGGAATTCAGTACCCAGAAATGATATGCAAAATATGCTTCATGGAATTTAACACAGTGATGGAACAGAAAGCACATGAGCGCAAACATGACAAAATATATTCTTGTCAGTATTGCTCCACAAAATTTGCATCAGTATACTTTTGTCAGAAACATTATGACAAGCACCTTGTTGATGTGAAGCCGTATCAATGTTCGTATTGTGGGAAAAGATTCCAGAACAGCATTTCACTTGACATCCATCGCTATCGGCACAGATGCTCAAAATGTCTGATATGTCACACATTGTTTGCAAACGAATTGGAATTGTTAATGCACGTAAGGGATCATGGGGTCCAGGGCAAGAATCAGTTCTTGGCAGCAATTGAGGAGCTGGACCAAGAGGAGTCCCAGTTGGAAGACATGCTGGGTGTCTACTTTAAAACAAGCACAGAAAATCATCCAGCAGCAGACATCAATAAAGATGTGACTGACTGTGTAGAAGGGCTCCTGTGTTCGGTCTCCCAGACACTGGAAGCTGATGGGTCGGTACCAGAGTCACTGGCAGACAAGAGAGGACTGGAGTGCAAGCTCTGTGGACTGGAGGTTCAGTCACCAACCGAATTGGTGGAGCATCGGCGTAGCAATCATATACGTAGCTGTACATGCCTGGTTTGTGGTAAGAGAAGCCGATCTGTCAGCCAGACATGGCGACATATAGCCACGCATGTCGACAAAGTGAAGTCTAATGAAACGGTGTACCTCGTCAAAAAGACTGAGCAACAGTGTCACGTGTGTCACAAGACTTTCCTGTCAAAAGGGAAGAAGAATTTCCACTTGGAACATGTGCACAAGGTTGAAACTATCCAGCGTCCACACAGCTGTACAGTCTGTTCAAGAAAATTCCAACATAAGACTTCTAGAGACAGGCATATGCTGCTACACAGAAAGGACAAGAGTGGCCTCAGATGTTCAGTGTGCAGCCAAGTGTTTCTGCGACCCAAATTCCTGGTACGGCATGCCACAGAGCATGAGTCCTGCAATGAGTGTCACATCTGCAGCAAAACATTCTCCAGCCGCAGACAACTCAAAGTGCACCTAAACGGCCACAGCCATGCTGTGTTTGGAAAGAAGTTCAAATGCTCACTGTGTTCAGTGACCTGTCAGGGTGTGTCGGGCCTGCGGGAACACATGAGAATCCATACTGGTGAGCGACCCTTCAACTGCACTCAATGTGAGGGGAGGTTCAAACGCCTCCAGGCCCTCAAGAAGCATATCAGCACTGTGCATTGTGGTCCTGGCACAGTGAATCACCCCTGTGCCAGCTGTCCGATGATTTTCAATAATCGAGGGAACTTGCTGCGCCATTTCTTGCGCATCCACCGTGGTTTGCGTCGCTTCATATGTGGGCTCTGTGGTGCCCGCTATGGACAGAACCAAGACTTGCGAAGGCATCTCAAGGCAAAACACCAAGTGGATATGCCAGTCATTTCATGTGTGGACAAGAAAACTGTCAGCGAGatTTATGTTCTGCCACCTATCGATAAAATCCCTGAGTCACATCCACATGCAGAAAGGATAAACAAACTTGTGGCTGAGGAGAAGAGCAAACTTGAAGATGTAACAGAGATGATAGGTAAGAAGGGTCTGGTAGCAAGACATATCACACCAGAGGACCTTGCAATTCGGCCCACAAAGGTCAGTCACAAGGAGCCAGTTCAGTCAAAACGTTTAAATGACAAAGAGAATATATCGTCAGACAAGGCAAATCAGTATATAAGTCCAGACACTGACAGTATTACTGATGTGGCATGTTCAAGGAAGATGGATCTTGGAGCTGCTAATAAACCCCCACAGCCTGGTAAATCTTCATTCAGCACTAAGATGCAACTTGGAAGTCTGGAGGAGCAGCAAGAAGTACAAGAAGTAAAAGCAGGGAGTTCCATGCCAGTAGTTGGAGATGTGTCATCCCAGTTCAAGAGCATCATAAAAATGCAAACATGTAGCCAGTGTCATAAGCCATTTTGTGAAGACACACTGAGTAAAGTGGGATCGGACAGCATAAAGATCATTTGTAAGAAATGCACAGTTTCAGAAAGTAGCACACCTGAGGAGATGCTGACTTTATATCGGTGTGGGATATGTTTCATGGACTTCTTTGAAAGAGATGTTCTGACAAGGCACATGGATGAACAGCACAAGGTGCCTCCTGAACTAATACCAAGTGTAGTCACAAAAACCTCTACAGACGTATCAAATACAGATACCACTGTCACGAATCTGAGCCAAGGCCCTGCCACGTCAACAGACATGGGACTGTTATGTCCACCAATGAACTTACTTCTACGGAACATTGTTTTACAGCCACGACCAGCAATACAAACATTGCCTCTAACATTCACCAATCAGAACATCCTGCTGAACTCTGCCCCCATGTTCACACTCCAGCCATCAGTGCTGACAACTCTGtctcagtcttctggaattatAACTCCAAAGAACTTGCTGTCTGGCCCTAGTATGTCCCTGCAAACCCCTGCAGAAGTTTTAATAAACCCAGGAAAAGTTCTGTTACCAGATTCTGTTCCTGAAGTTGCTAAACCGAAGCTGAATTCAATGAATAAAGCCATGGATAACAGCAAATTGATCCTAGAGGCAAATCCTGTGGAGAAGACCGTAATCAGGAAGTCAAATAACGAATCACCAAAAGCAACAGAGAAACATCCAGTTGGAGCAGAGTACACCTGCAAACAGTGTGGCAAAAAATTCTTCAACAGTGCAAGACTGGAACGGCACCTCAAGACACATATGGGAGAACGACCCTTTGGCTGTGCTCAGTGTGGCAAACATTTCTCGGAGAAACACAACCTGAAAGTGCACATGCGTACACACACTGGAGAGCGCCCATACACGTGTACAGAATGTGGCAAGCAGATGAGGTACCAGAAAGATTTTGCAGATCACAAGAAGCAACACCTAGGAATGAAGCCATTTGAATGTACAGAGTGTGGCCAGCGGTTTCTCCGACAGAGAGAACTTGTACGGCACAAGATTACTCACACTGGAGAAAAGAAGTACAGGTGTCCCATCTGTGACAAGGCTTTTGCCCGTATGGATCAACTGAAATTGGTGCACATGCGTCAGCACGAGACCAAGCCAGAGCCTTCCCCTTTTGTTTGTAGAACTTGCCATAAGAGGTTCAGAGTCAAGGGGAAGCTTGAACAGCACCAGATCCTGCACTCAGGCCAGAAGAATCACCACTGTCCAATCTGTGATAAAGCTTTTGCATTAGATGTGTATCTGAAATCACATCTGAAGACGCATAAGAAGCAGGATGGCTACATCCAGTGCCCAAAGTGCGCTCGAAGATTTGCTTCTGAAGAGACATTACAGATCCATGATGACAGGTTTCATGTCAGAATGCAGAGAATTGCAAAGCAGTCCAGAGacgggaacaaaaagaagcaTAAAAAATTGAGTGTACTCCCAGACACGGCCCTGCTGGAGCCTGAAATAGACATCACAGATATGGATGCAATAGGGGCAGTCAGCCTCCTGGAGGAGGGAGATGACATCCTTTCGGACAAGTGTAACACTGTCGTCTATCTGCAGATGGTGCCAGACCTTGATTTGTCTCTCAATAACGACACCTCAGAGTAA
- Protein Sequence
- MTAVKGLDNMIANPGCNVQSGVVLLTGLPTNFFNEEVPTLILRTQQDTLGAQAQENTQVQPNLGLYSIVLGSELLEPSLQEENRESIENNKSGDESNSDQLLNSVNIPSEQNMISARPVTHIEIIRQKPSVVKVKHGASRRVTGANRVVPLITSMWQKRELKSIEPSLAATYKTILDDPDYSDEHECETCHKQFLSATQVEHHIKEMHPQQQVVLEQCFVCRKKYVVQSQLKRHLSAVHGIQYPEMICKICFMEFNTVMEQKAHERKHDKIYSCQYCSTKFASVYFCQKHYDKHLVDVKPYQCSYCGKRFQNSISLDIHRYRHRCSKCLICHTLFANELELLMHVRDHGVQGKNQFLAAIEELDQEESQLEDMLGVYFKTSTENHPAADINKDVTDCVEGLLCSVSQTLEADGSVPESLADKRGLECKLCGLEVQSPTELVEHRRSNHIRSCTCLVCGKRSRSVSQTWRHIATHVDKVKSNETVYLVKKTEQQCHVCHKTFLSKGKKNFHLEHVHKVETIQRPHSCTVCSRKFQHKTSRDRHMLLHRKDKSGLRCSVCSQVFLRPKFLVRHATEHESCNECHICSKTFSSRRQLKVHLNGHSHAVFGKKFKCSLCSVTCQGVSGLREHMRIHTGERPFNCTQCEGRFKRLQALKKHISTVHCGPGTVNHPCASCPMIFNNRGNLLRHFLRIHRGLRRFICGLCGARYGQNQDLRRHLKAKHQVDMPVISCVDKKTVSEIYVLPPIDKIPESHPHAERINKLVAEEKSKLEDVTEMIGKKGLVARHITPEDLAIRPTKVSHKEPVQSKRLNDKENISSDKANQYISPDTDSITDVACSRKMDLGAANKPPQPGKSSFSTKMQLGSLEEQQEVQEVKAGSSMPVVGDVSSQFKSIIKMQTCSQCHKPFCEDTLSKVGSDSIKIICKKCTVSESSTPEEMLTLYRCGICFMDFFERDVLTRHMDEQHKVPPELIPSVVTKTSTDVSNTDTTVTNLSQGPATSTDMGLLCPPMNLLLRNIVLQPRPAIQTLPLTFTNQNILLNSAPMFTLQPSVLTTLSQSSGIITPKNLLSGPSMSLQTPAEVLINPGKVLLPDSVPEVAKPKLNSMNKAMDNSKLILEANPVEKTVIRKSNNESPKATEKHPVGAEYTCKQCGKKFFNSARLERHLKTHMGERPFGCAQCGKHFSEKHNLKVHMRTHTGERPYTCTECGKQMRYQKDFADHKKQHLGMKPFECTECGQRFLRQRELVRHKITHTGEKKYRCPICDKAFARMDQLKLVHMRQHETKPEPSPFVCRTCHKRFRVKGKLEQHQILHSGQKNHHCPICDKAFALDVYLKSHLKTHKKQDGYIQCPKCARRFASEETLQIHDDRFHVRMQRIAKQSRDGNKKKHKKLSVLPDTALLEPEIDITDMDAIGAVSLLEEGDDILSDKCNTVVYLQMVPDLDLSLNNDTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -