Basic Information

Insect: Cryptotermes secundus
Gene Symbol: thap1
Assembly: GCA_002891405.2
Location: NW:34266-50488[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.4 11 6.2 0.1 1 23 551 574 551 574 0.94

2 16 0.01 0.29 11.2 1.5 1 23 579 601 579 601 0.97

3 16 0.023 0.66 10.1 3.8 1 23 819 842 819 842 0.94

4 16 3e-05 0.00087 19.1 2.4 1 23 848 870 848 870 0.97

5 16 0.0067 0.19 11.8 0.8 1 19 877 895 877 895 0.93

6 16 0.0035 0.1 12.6 0.8 1 23 904 926 904 926 0.96

7 16 0.00014 0.0041 17.0 1.9 1 23 935 957 935 957 0.97

8 16 0.003 0.085 12.9 3.9 1 23 963 985 963 985 0.95

9 16 2.5e-05 0.00071 19.4 2.1 1 23 991 1013 991 1013 0.97

10 16 0.00028 0.0081 16.1 0.8 1 23 1019 1041 1019 1041 0.98

11 16 0.00045 0.013 15.5 2.0 1 23 1063 1085 1063 1085 0.98

12 16 1.1e-05 0.00031 20.6 5.5 1 23 1091 1113 1091 1113 0.98

13 16 0.0049 0.14 12.2 3.0 1 23 1119 1141 1119 1141 0.98

14 16 6.5e-06 0.00019 21.2 3.0 1 23 1147 1169 1147 1169 0.98

15 16 8.5e-06 0.00024 20.9 0.7 1 23 1175 1197 1175 1197 0.99

16 16 0.00029 0.0082 16.1 2.5 1 23 1203 1225 1203 1225 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.4	11	6.2	0.1	1	23	551	574	551	574	0.94
2	16	0.01	0.29	11.2	1.5	1	23	579	601	579	601	0.97
3	16	0.023	0.66	10.1	3.8	1	23	819	842	819	842	0.94
4	16	3e-05	0.00087	19.1	2.4	1	23	848	870	848	870	0.97
5	16	0.0067	0.19	11.8	0.8	1	19	877	895	877	895	0.93
6	16	0.0035	0.1	12.6	0.8	1	23	904	926	904	926	0.96
7	16	0.00014	0.0041	17.0	1.9	1	23	935	957	935	957	0.97
8	16	0.003	0.085	12.9	3.9	1	23	963	985	963	985	0.95
9	16	2.5e-05	0.00071	19.4	2.1	1	23	991	1013	991	1013	0.97
10	16	0.00028	0.0081	16.1	0.8	1	23	1019	1041	1019	1041	0.98
11	16	0.00045	0.013	15.5	2.0	1	23	1063	1085	1063	1085	0.98
12	16	1.1e-05	0.00031	20.6	5.5	1	23	1091	1113	1091	1113	0.98
13	16	0.0049	0.14	12.2	3.0	1	23	1119	1141	1119	1141	0.98
14	16	6.5e-06	0.00019	21.2	3.0	1	23	1147	1169	1147	1169	0.98
15	16	8.5e-06	0.00024	20.9	0.7	1	23	1175	1197	1175	1197	0.99
16	16	0.00029	0.0082	16.1	2.5	1	23	1203	1225	1203	1225	0.97

Sequence Information

Coding Sequence: ATGGTAGCGTCCTGTTCAGTTATTAATTGCAGGAATTCGAGGAAGAATAATAGTAACAATGTAACATTTCACAGGTTTCCTCTAAGTAAGCCGGAGCTTTGTAAGCAGTGGGTTCGTGCTCTTTGCCAACCAGACTTTAATCCTTTGCCACATCATTTACTTTGCTCAGATCATTTTGAGAAAAGTTGTTTTCTGCCAGGATATGTAAATAGACGACAGTTAAAGAAAAACGCAGTACCTACTTTGTTTGATTGTCTTGAAAAGGAATTGCAACATCTGGCATCAAACACAGAGAAGGAAGAACCAATGTCAGTGTCCAATCTAAAAAATGATAATGTTGCTTTCTCAAAGTTGGATCAAGAAGCTGCAGACTTGCTGGATGAGCAGTATGGTTCTGGAAGCAAAGCAGAAGAACCACTAAAAATGCGGACTGAGTCACTGTGTCGTGTCTGTGCATGTCCAAGTGAAGAATTAGTCCCAGTGTTTGGGCAGAAAGGTTCAGAATTGCAGCTGCTTGAGAAGATTCACATACATCTCCCTATAATGGTGACACCAGAAGATATACTTCCTGTGACTATGTGCACATCCTGTATTTGTAAACTTGAAATGTGTCATCAGTTTGTTCATGGATGTTTGGATGCAGATATAAAGTTGAGAACAATTTTTGGCTTGGAAATGGATGAGTTAATGCTTTACAGTGATGAGCATACTGTTGAGAGTCCATGCGGAACATCTAAGGAACCTTCTCCACAAACAGAAAAGGAAGAGCTGTATTCCCACACATCTGAAGGTTCCGCAGATGACGAATATGAAACTCATACAGCACAGTCAGTCAAATCAGATGAGTCTGTTGATAATTTTGATTATACAGAACATCCAGAAATTTCAGCAGTTGTACCTGAACAGAATACTGAAGTAGGTGTGAGAGATGTGGATGACATAGAATACAAGGCTGTTGATGCCAGTCATCATTCTCTTGAACAGCTTAATCATACAGCATACATAGATGGTGCACTTGTGGAAGAACAGAATGTTGTCATAGACATGGAAGGGGCAGATGTGGTGGAATATGAAACTTACAGCCTTGGTCATTCAGCTGACGAAGTTGATTGTGCAGAATATGCAGAAATCTCATGGACTCATGGTGATTATACTGAGGTAGATGCAGATGTTATAAATGAGGTTCAGTATGATGCAAATGACTTTGATGAACATTCTGATCAGCTGCAGAGTTCTGAAGAACAAGAAATCACATTTGATCAGCAGAGTCATGAATACCTAAAGAATGCAGAGTCTGCTGCAGGCTGCATGAAATTGAGACATAGTTCAGCTGCAGAAAAGTCAAAAATGAAAAGAGAGAACCCTAAAGTGAAAGTTGTTATTGTGAACGTGAAAGATACAGTGAACAAGACACACACTGCACAGTTCAGAAGGACTTCagatctgatgatgatgaaggatCTTTCTTCAAACAAGATACAGCAGGCACTTGAATATCAGGAGTCAGACAATTCAAAATCACCTAGATCTGACATTATGTTGAAGTCATCCGCAGTTTCTATAGGAGACATGACGCCTAAACAAGTGAAGCTGGAGAGGCCTGCACGTATGCATGGAGATCATTCCTATACATATCGGCGGCACTCTTTTTATCCTTGTATATATTGCAGAGAGACTGTTAACACTAAAGAGAGACTTATTGCACATCAAGTAACTGAGCATCCTGGTAAAGTATTTTGTTGTGAACAGTGTGGTAGTGTTTATTATTCCAAAGCACTATTGGATGAACATCAGAAAAGCCATGTGATAGAAACAGAAGATGGCAGTGCTCAGCCTGAGTCCAACATCTTTTTGCAGTCTTCAGTTTGTGTAAAAGAAATCCAACCATTGTATTCTAATAATGATAAAGTTGTGGATAATGGTGTGATGAACCTGGACAGTAGGGAGAAATTAGGAACATTGAAGCTGGAGAATGGTGCTGGTGATATATTGCCAGTACCAGAAGTTTCAGAGGCTGAGAAAGATTCTGTAGACAAAGATATTCAGAGACAAAATGAACAggaaaatacagaagaaatcAGAATGGTAGATGTTCATATAAAACCAGAGAAAGGAACTGAAAAGGGAGatgtatataaaaacacttcTAAATTCTGTTTAAAATTATCAAAGGAATTTGAAAACATTGATCTGGATTACAAATCAAAGATTTTAGAAACTGTTAATAAGATCATGGAAGAGAATGGCAGTCATACCAAAATAGACACTGTTATACCTGAAATTGTGAGACAGGAGGCAGAGAAAAAACTGGGTATCCCTGAATCAGCGAAGCCAGTACTCAAGACGCAGATGAGAGATATGAAGCATAACATTTGGAAATGTAATCTTTGTAATCATGTTTCAACTTCACTGCAGAAGCACCAAGAACATCGTCGAACTCATCCTCAAATAAAGTTCTCATGCTCGTATTGTAATAAGCAGTTCCCGTCACAGAAGAGCCGTAGTCATCATGTCTCTATACGTCACCCTGACAAAAAACGTTTCATTTGCGAGCATTGTGGAAAAAGCTTCCGTTTTTGGCTTTCTCTTAGAGACCATTTGTTCACTCATAATAAAGGTGAATGCATATTTCAGTGTGAGAAATGTGGGAAAGAATTTGAGTCAAAAGCAAGCTATGATAGTCATGACTGTAAACCTGGTGGAGCTTCGTACCTCTGTGATATATGTGGCAAGAGCATGAGGTACCTTACAAGTCTCAGATCCCACAGGCTCTCCCATGCTGATCCTGCCAGTCAGGCCAAACATTCTTGTGCAATATGTGGAAAGGAATACAGCAGCAGGTGTTTGCTTGCTGATCATATGCGGCTGCACACAGATGAGCACCCACATCAATGTATACATTGTGGGAAAGCATTTCAGACGAGAAGTCAGCTCTCAAATCACAAGTTAATTCATATTAATGCTCGTAAGCACAAATGTCCTCTTTGTGGAAAAGGATTTGCTCGTCGACAGCACATGAGGGTGCATGTTAGGGCACACCAAAGATCATTAAAATACGCTTGCAAAATATGTAACTGTCCATTTTCAAGCGTGGGAGAACTCATAATGCACCGTAAAACTCATACCCAGGAAGAAATTGCGGAAGCATCAAAAAAGCAAGTTCTGCAAGGTGGAGGTCCATTGGCATTCACGTGCCAGATATGTGGAAGACATCTGGCAAGCAAGTTCACTCTTAAGAACCATGTGATGATGCATGCGGATGATAAACCATTTCATTGTGAGATCTGCGGTAAGAAGTTTACGATGAAGTCATCTCTACAGACACATCATCGTGTGCATACACGAGAGAGACCTCACACATGTCAGCATTGTGGTGACACATTCCAGTCAAGACAGAATCTTGTAGTCCATGAACGTATTCATACGGGGGAAACGCCTTTCAAATGTACAGAGTGTGATAAGGCTTATCGTTCTAGACACAGTCTCAGGCAGCACCTTATGATTCACGCAGACTATCGGCCATATGAGTGTCTACAGTGTGGGAAGAGATTTAGACGCCAGGATATTCTCATCACTCACATACGCACGCACACAGGAGAACGACCCTTTGCTTGCAATGTGTGTGGCCGTGCCTTCAAACAAAAAGGGGACTGTAACAAGCACCAGCAAAGACATGCGTTATAA
Protein Sequence: MVASCSVINCRNSRKNNSNNVTFHRFPLSKPELCKQWVRALCQPDFNPLPHHLLCSDHFEKSCFLPGYVNRRQLKKNAVPTLFDCLEKELQHLASNTEKEEPMSVSNLKNDNVAFSKLDQEAADLLDEQYGSGSKAEEPLKMRTESLCRVCACPSEELVPVFGQKGSELQLLEKIHIHLPIMVTPEDILPVTMCTSCICKLEMCHQFVHGCLDADIKLRTIFGLEMDELMLYSDEHTVESPCGTSKEPSPQTEKEELYSHTSEGSADDEYETHTAQSVKSDESVDNFDYTEHPEISAVVPEQNTEVGVRDVDDIEYKAVDASHHSLEQLNHTAYIDGALVEEQNVVIDMEGADVVEYETYSLGHSADEVDCAEYAEISWTHGDYTEVDADVINEVQYDANDFDEHSDQLQSSEEQEITFDQQSHEYLKNAESAAGCMKLRHSSAAEKSKMKRENPKVKVVIVNVKDTVNKTHTAQFRRTSDLMMMKDLSSNKIQQALEYQESDNSKSPRSDIMLKSSAVSIGDMTPKQVKLERPARMHGDHSYTYRRHSFYPCIYCRETVNTKERLIAHQVTEHPGKVFCCEQCGSVYYSKALLDEHQKSHVIETEDGSAQPESNIFLQSSVCVKEIQPLYSNNDKVVDNGVMNLDSREKLGTLKLENGAGDILPVPEVSEAEKDSVDKDIQRQNEQENTEEIRMVDVHIKPEKGTEKGDVYKNTSKFCLKLSKEFENIDLDYKSKILETVNKIMEENGSHTKIDTVIPEIVRQEAEKKLGIPESAKPVLKTQMRDMKHNIWKCNLCNHVSTSLQKHQEHRRTHPQIKFSCSYCNKQFPSQKSRSHHVSIRHPDKKRFICEHCGKSFRFWLSLRDHLFTHNKGECIFQCEKCGKEFESKASYDSHDCKPGGASYLCDICGKSMRYLTSLRSHRLSHADPASQAKHSCAICGKEYSSRCLLADHMRLHTDEHPHQCIHCGKAFQTRSQLSNHKLIHINARKHKCPLCGKGFARRQHMRVHVRAHQRSLKYACKICNCPFSSVGELIMHRKTHTQEEIAEASKKQVLQGGGPLAFTCQICGRHLASKFTLKNHVMMHADDKPFHCEICGKKFTMKSSLQTHHRVHTRERPHTCQHCGDTFQSRQNLVVHERIHTGETPFKCTECDKAYRSRHSLRQHLMIHADYRPYECLQCGKRFRRQDILITHIRTHTGERPFACNVCGRAFKQKGDCNKHQQRHAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00396345;
90% Identity: iTF_00396345;
80% Identity: iTF_00396345;