Csec010392.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- -
- Assembly
- GCA_002891405.2
- Location
- NW:115715-118075[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.064 88 2.7 0.6 12 30 26 45 21 57 0.75 2 15 0.00086 1.2 8.7 1.1 11 28 76 93 72 104 0.82 3 15 0.12 1.7e+02 1.9 1.0 14 29 107 122 97 133 0.75 4 15 0.0046 6.4 6.4 2.1 13 38 134 156 122 161 0.82 5 15 0.093 1.3e+02 2.2 0.9 12 30 161 179 155 188 0.78 6 15 0.043 60 3.3 1.3 11 29 189 206 180 218 0.79 7 15 3.2e-05 0.044 13.3 0.4 9 38 215 240 207 245 0.79 8 15 0.38 5.2e+02 0.3 0.4 14 27 247 260 237 268 0.77 9 15 0.00044 0.61 9.7 0.3 15 40 278 300 263 303 0.78 10 15 0.013 18 5.0 1.9 13 29 304 320 295 332 0.73 11 15 0.00014 0.19 11.3 0.8 12 39 331 359 321 363 0.80 12 15 0.72 1e+03 -0.6 2.9 17 29 364 376 356 384 0.75 13 15 0.00032 0.44 10.1 0.3 11 40 387 412 377 418 0.79 14 15 0.061 85 2.8 3.7 14 29 417 432 407 446 0.74 15 15 0.0011 1.5 8.4 1.1 13 38 444 466 433 471 0.78
Sequence Information
- Coding Sequence
- ATGACTGATGAGAGGAAACACTTGCTTTGCAGTGACAAGAAGCCAGCGATTGAAGATGGATCCTCTATCATGAAGAAGATAGGTAATGTTTGGAGTTGTGACATATGCAAGGAAGGGTTCCCATCACATCAGCATCTCACTGAACACTGCCAAACGCACGTCACAGACACTTCATTCAAGCATGATGTTAGCGGTTTGCAGCCTTCACAAAGTGAATTGCATGTGAAACATAAGGACACACATTTCAGATGTTCCACATGTGGGAAGCAGTATTCACGGTATCCAGATCTTGTGAATCATCAGCGAAGACATACGGGTAACACGCCTTTCAAATGTGGCAGTTGTGGGAAAGGATTTTCACATAAAAGATATCTTGTGACACATCAAGGAATACATACAGGTGAAAAGCATTTCAGATGTTTTACTTGTGGAAAATCATTTTCACGGAAAGGAAATCTTATGAATCATCAGAGAATTCATAGAGGTGATAAGTCTTTCAAATGTGCCACTTGTGGCCAAGTAGTGTCAGAAAAAGGAAGCCTTTTGAGACATCAGAGAACACACACTGGTGAAAAGCGTTTCAAATGTTTTACTTGTGGGAAAAGTTACACACAGAGTGCAGATCTTGTAGCACATCAGAGAATACATACAAGTGACAGTTCTTTTAAATGTGACATATGTGGGAAAGTGCTATCATATAAGGGGAATCTTGTCAGACATCAAAGAATACATACGGGCGAAAAGCCATACAGTTGTATTACATGTGGGAAAAGTTTCGCATGGCATGCAGTTTTCGTGTCACATCAGAGAATTCATAGAAGTGACagatacacgtattttaaaTGTGACATATGTGGGAAGGTGTTATCAGAGAGGGGAAGTCTTGTGAGACATCTTAGAATACACACGGGTGAAAAGCCATACAGTTGTATTATATGTGGGAAAAGTTACACACAGAGTGCACGTCTTGTGGAACATCAGCGGCTACATACAAGTGACAGTTCTTTTAAATGTGACAAATGTGGGAAAGTGTTAacagaaaagggaagtcttatCAAACATCTAAGAATACACATGGGTGAAAAGCCGTACTATTGTATTACATGTGGAAAATGTTATGCACAGAGTGCAGATCTTGTGGCACATCAGACAATACACACAAGTGACAGTTCTTTTAAATGTGACATTTGTGGGAAAGTGTTATCACTGAGGGCAAGTCTTCTGAGACATCTTAGAATACATATGGGTGAAAAGCCATACAATTGTATTACATGTGGGAAAAGTTACACACGGAGTGCACGTCTTGTGGAACATCAGAGAATACATACAAGTGACTGTTCTTTTAAATGTGACATTTGTGGGAAAGTGTTAACAGAAAAGGGAAATCTTATCAAACATCAAAGAATACACATGGGTGAAAAGCCATACAATTGA
- Protein Sequence
- MTDERKHLLCSDKKPAIEDGSSIMKKIGNVWSCDICKEGFPSHQHLTEHCQTHVTDTSFKHDVSGLQPSQSELHVKHKDTHFRCSTCGKQYSRYPDLVNHQRRHTGNTPFKCGSCGKGFSHKRYLVTHQGIHTGEKHFRCFTCGKSFSRKGNLMNHQRIHRGDKSFKCATCGQVVSEKGSLLRHQRTHTGEKRFKCFTCGKSYTQSADLVAHQRIHTSDSSFKCDICGKVLSYKGNLVRHQRIHTGEKPYSCITCGKSFAWHAVFVSHQRIHRSDRYTYFKCDICGKVLSERGSLVRHLRIHTGEKPYSCIICGKSYTQSARLVEHQRLHTSDSSFKCDKCGKVLTEKGSLIKHLRIHMGEKPYYCITCGKCYAQSADLVAHQTIHTSDSSFKCDICGKVLSLRASLLRHLRIHMGEKPYNCITCGKSYTRSARLVEHQRIHTSDCSFKCDICGKVLTEKGNLIKHQRIHMGEKPYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00396487;
- 90% Identity
- iTF_00396487;
- 80% Identity
- iTF_00396487;