Csec008662.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- Arid5b
- Assembly
- GCA_002891405.2
- Location
- NW:969376-1088207[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-24 2.4e-21 75.4 0.0 1 89 317 403 317 403 0.95 2 2 6 1.2e+04 -4.2 0.0 13 31 773 789 771 790 0.75
Sequence Information
- Coding Sequence
- ATGGATACTAATAAGATACAGCTAATTGGTGCACCATGTGGACACCATGGACAATATACATTCTACAAaggttttaaatataaaaagaatggAAGACATAAAATATTATCTCTGAGTGATTTTTTCTTCGTCAAATTATGGAGTGATTCAGACTTAATTAGCATTGGAGAATTGCAACTTCTGTGGATGGACAAAAATAGCGAACAAGTGTTGGCAAGTTTGCGACTGTATTTTCTGCCAGAAAACACACCTGAAGGGAGGAACGACGACCATGGAGAGGACGAGGTCCTGGCGATATCAGAGAAGGTTGTTTTGCGGGTGGAGGACTTGCTGGATCGAATCGTGGAAGATGTCTCGTGGTGCCGGGGACTTGAGGCTGTGTGGGAAAggaactgctttcttcagccaTCCAGCGATGAGGCCACGAAGTCACACGGCAAGATGCTCATCGACAGCGCCCTCGACTTCCAGGACGTTCTCAAAGAAAGAGAGCAAATAGCTGATGATTTCGACCCGGAAGTCTCCGCAGTCGTGGTGCTCAGTTTCCCGAGGTACTGTCGGTACCGAGGCATCATGAAGAGGCTTGAAGGTGTCGCCAACAGGTGGCTGAAGAACGCCTTGGTGATTGCTCTGGGGGGCTTCGTCGTGCCCTGTCGCAGTACCCGGATCCTCTTCTGTAAAGATACCTTCGATTACCCAGATCTCGAGGGTCATGAACTTCTCTGCAACCATCTTGCACCAAACTTAAAAGGACGGCCTCGAAGGAAACGTAAAAAGCGAAGTTTATCGCCTGGAGGTTCAGAATCCAATGAATCCGAAGAGTCTTCATTGTCAACTGTGTCCTCCACCGTGAAGAGCAAACCAACAGGCAGTGGTGGTGGAAGAAATGGCCTGCGTTGCAACAGTTTGGTTCAGCCACGACGAAGCAGCAGAGTCAATGCAAGTCCTGAGGAGAAGGAATTCTTAGTGAAGCTGCATCGATTCATGAAGCTGAGACAGACACCCATTGGAAGAGTTCCTCATTTAGGATTCAAGGAAATCGACTTGTTTGCTTTCTTCAGTAAAGTCCAAAAGTTAGGTGGCTACAATGTCGTGACAGCCAATCGGATGTGGAAGCCTATTTATGATGATCTAGGAGGCCATCAGGGTAGTACTAGTGCTGCCACCTGCACACGACGACATTATGAAAGGTTGCTGCTTCCATATGAGCGGAGTGTGAAGAGTGATGAAGGCAAAGAACGGCGACGTTCAAAATCTGTCAGGAATGAAGGTGATAAGGTATCAGCTTCAAGTGAACGGACAGAGCGCCATGTGAAACCACCACCTTGTACTGAAACGTCAACTCCAGACAATAAgAGTGCTCTTCTGAATGGAGGCCAGAAGGAAAAGGCTGTAGTTCTTGAAGGTAAGACCTCATCTCTACGAAGTGTTAGAACAAAACCAGACAAGACTATACTAGACCCAACAGTCATGCCACGTCCTaaagacaaagaaaatattccCGTATCAAATTTATCAGAAGGATTGGTGGTAGAAGTGAAACAAGAGCCAGCAAGTGAGGGAAGTGTAAGTGAGAAGCCTTTGCCTGAGTTGATAGACCTTGTTCCTGAACAAGATTCTTCTTCAAAAGTTGTCAAAACATCACCTGTACCTGCACTGAAAAAGCGCAAATTGGAGATTCTCAAAGAAGGTGGGTTGGAAGTGACTGCCATAACACCACCAGTAATGGCTTCAGCGACTTCAATAGGGTCAGTTACCATCACTGCGGATAGACGACCGTCTGTCATACAACATGCTGCCCCAGTCCAGAGTCCTCTACTGGGACAGGTTTCTATTACCGTGACTCCTGATGTTACGCACATGTTGGGGTCACCTCCAACAGAGTCAAACTCAGCTGCCTCAACACCTTCCCCAACTGCTGACTGTGAGCTGCCAAGTCTTCGTCGTACACACGTCAGTGTCCATGACTTGAAACATCCAGCACTGCAGCATTTATATACTGGAAGCTTGTCACATGTCCATTCTTCAACCCCTAGTCCTAGCAGTACTACTGATGAGTGGACACCACCACGTGTAACTCAGTCACGTTCAATATATGCTCATTCAGAGTCAACTGTGTATGGAAATCCAAAAGATGATATAGAATCATCACCAGGATCATTGAATCGTAGACGGAGCATTGTTAAGCCTGTGCCCTCCGGTGGTGAAGTCCTGGATCTACGAGTTTCTAATTCGCGTAAACCTGCAGTAAGCATAAGCCGTGTATCAAGTGTTGTTCATCCTCATGCTAGCACAAGGAATCCCAACAGATCATCTCACAAAACCAATGGCATATCTCCATTCCCCGTTATAGATGGGCGGGCAGTGGTAGGCTCCAATTTGGAAATAACAATTGTGGATGTTCCAAAGCCATCTCCTTCATTGCAACAGAGACAGCAGCAGATGTTGCTTGAACAACACAGAGGTTTGCAGCATCACCGGAGGTCACTCAGCATCAAGCCTGCACCATCAAATCGTCCACTTTCCAGAAATGAGAATGGAAAGCACAACTCCCTGTCGATTACGCACATCCCTCCTCAGCGAAACAGCAGCCATTCTAGTAGCAGTGCTCACCTTGTGATTCCTAACCCGTACCCTTCATCCGCTGCAGCAAACAATCGCAAAAGCCTTATAAGTGATGGGTCACGATCGCGACAGCCGCATCCAAACACCACTCCACAGTCGCCTCAGTCTGCTACCCCTACTTCAAGCTCAATGTCTTATCTTCCTACAGGCTCCCCAGTTTACCCTGGTTACCTCCCTCAGCTGTCTCCAGTGTCAGGAAGTTCCACTGCAAAGAATCCATATCACTTCCCCTTGTTGGATCCAATGTACTACCCTGCACTGTATGGTTCACATGGTCTCTATTCTCCCAACatggctgctgctgctgccgccgctgCCTTTCTGTCTCCTCTACAGGTGGCAGCAGCTCCACCGTTATTCGCACCATCTGCAGAACAGTTGCAGCTGTACAAGGACCTGATATGTCAGAACCACAACAATCTGCGGTATGCTCAGCCTGGAGCAAGCTTCTTGGGTTTGCCACGGGATGGTTCTACATCAATAACACCTGTTGGCCAGCCAACACCCACATCAAAGTGA
- Protein Sequence
- MDTNKIQLIGAPCGHHGQYTFYKGFKYKKNGRHKILSLSDFFFVKLWSDSDLISIGELQLLWMDKNSEQVLASLRLYFLPENTPEGRNDDHGEDEVLAISEKVVLRVEDLLDRIVEDVSWCRGLEAVWERNCFLQPSSDEATKSHGKMLIDSALDFQDVLKEREQIADDFDPEVSAVVVLSFPRYCRYRGIMKRLEGVANRWLKNALVIALGGFVVPCRSTRILFCKDTFDYPDLEGHELLCNHLAPNLKGRPRRKRKKRSLSPGGSESNESEESSLSTVSSTVKSKPTGSGGGRNGLRCNSLVQPRRSSRVNASPEEKEFLVKLHRFMKLRQTPIGRVPHLGFKEIDLFAFFSKVQKLGGYNVVTANRMWKPIYDDLGGHQGSTSAATCTRRHYERLLLPYERSVKSDEGKERRRSKSVRNEGDKVSASSERTERHVKPPPCTETSTPDNKSALLNGGQKEKAVVLEGKTSSLRSVRTKPDKTILDPTVMPRPKDKENIPVSNLSEGLVVEVKQEPASEGSVSEKPLPELIDLVPEQDSSSKVVKTSPVPALKKRKLEILKEGGLEVTAITPPVMASATSIGSVTITADRRPSVIQHAAPVQSPLLGQVSITVTPDVTHMLGSPPTESNSAASTPSPTADCELPSLRRTHVSVHDLKHPALQHLYTGSLSHVHSSTPSPSSTTDEWTPPRVTQSRSIYAHSESTVYGNPKDDIESSPGSLNRRRSIVKPVPSGGEVLDLRVSNSRKPAVSISRVSSVVHPHASTRNPNRSSHKTNGISPFPVIDGRAVVGSNLEITIVDVPKPSPSLQQRQQQMLLEQHRGLQHHRRSLSIKPAPSNRPLSRNENGKHNSLSITHIPPQRNSSHSSSSAHLVIPNPYPSSAAANNRKSLISDGSRSRQPHPNTTPQSPQSATPTSSSMSYLPTGSPVYPGYLPQLSPVSGSSTAKNPYHFPLLDPMYYPALYGSHGLYSPNMAAAAAAAAFLSPLQVAAAPPLFAPSAEQLQLYKDLICQNHNNLRYAQPGASFLGLPRDGSTSITPVGQPTPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288795;
- 90% Identity
- -
- 80% Identity
- -