Cacu009934.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- -
- Assembly
- GCA_963556235.1
- Location
- OY744559.1:11691079-11701406[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.84 90 4.5 0.4 3 23 385 407 383 407 0.91 2 14 5.7 6.1e+02 1.9 4.2 1 22 509 530 509 533 0.90 3 14 0.67 72 4.8 1.8 1 22 544 565 544 568 0.90 4 14 5.2 5.6e+02 2.0 2.4 3 23 591 611 590 611 0.92 5 14 0.00047 0.051 14.7 2.0 1 23 625 648 625 648 0.97 6 14 1.6 1.7e+02 3.7 0.3 1 21 653 673 653 677 0.85 7 14 0.0072 0.78 11.0 0.5 2 23 690 712 690 712 0.95 8 14 0.00058 0.062 14.5 0.1 2 21 718 737 717 738 0.95 9 14 8e-06 0.00085 20.3 1.5 1 23 790 811 790 811 0.98 10 14 7.3e-05 0.0078 17.3 2.1 1 23 817 839 817 839 0.97 11 14 0.0016 0.18 13.0 0.4 1 23 857 879 857 879 0.95 12 14 0.0006 0.065 14.4 3.0 1 23 914 936 914 936 0.97 13 14 0.0018 0.2 12.9 3.4 1 23 942 964 942 964 0.98 14 14 0.0025 0.27 12.5 3.6 1 21 970 990 970 995 0.94
Sequence Information
- Coding Sequence
- ATGATTGAAGATTTCGAAGACGATACCCACTTCTGTCTAAAGTGTCACAGCACAATCATTGGACTAGACAATTACGTAAATCATCGCAAAACGACATGTGGAAAAATAACAGAAAGTTTCAAGTCACCACTATCTGACCAACTTATTGCACCGGATGAACCATTCGCGCTGAAAGCAGACGACTTTTTTTCGTCCTTAGAATTGCAAAGCAGCTCCAAAAAAGTTCAAACACATTCAACGTCTGGTAAAAGTTTTGGTGTTTTAACGCGCAGCAAAACAGCGGGAATTCAAGCGACATGCACTAATAAGGAACAAAGCGATGCGAATCAATCAAAGTCGGGCAAAAATGTTTGGATTGGGGGCGATCATTTAAAGGAATTAGATGATGCTGATAATGagactaaattaattaaagcggTTGATAATTTAGAGCAACGCAAAGAAGAGCCAGCAACTATTCAAGCCTACGAGGCTAGTGACGACGAATCTGTGGATTTCGATTACGATGACGATGAAGTATTGTCAGATGATGAAGATGCGCCACCTCGCAACTATACGGGAGGAAAATGGAAACCCACATCTCCAGTACCTTGGAACTGGAGCAATTCTTATTCTTCCTATACGGGTTGTAAATGGAAACCGTTGATAAACAATAAAGCTAAATGGAAACCACGAAATGAGAACGATAATGAATATTCTGCTGATGTTCCTCCAGCGAATTATACAAAAGGAAAATGGAAACCTATGAATGAAAGTCAAGATTATCCTCCTGCAAACTACACCAAAGGCAAATGGAAACCAAAAAGTGATAATGATAGTGATATTCCAAGTCCAAGTCATACTAAAGGAAAGTGGAAACCCAAATCTGAGATTGAGGAAGAAACCAAACCCTCTATAAAAGTACGAAATGTTTTAAAAGACTTAGATATTCAACCAGTACCAGGACCTAGTAAAGTAAATCCACTCAAAAAAACTACGCCTATTACCAAAGAAAAAGATGATCTGAAGATGGAAATTGAGGAATCGACCAGCTATACGAAACCAAAGCAAAGCTTCTCTAAAGGAAAATGGTATCCTCAACAAGAAACCTCACCGATAAAGCTGCTCAAATACTCACCTTTGAGGAAATCTAGTGGAATGGTACAATATTGGTGCAACTCCTGCAATAGAAGACTAGCTTCTAAAGTAGTTTACGAACGACATTTAAAATCAGAGCTACATTTCAAACGTTCACTGCAAGAACGCGAATTTGACGATGGAGTTAACATGAACCTGCTCAGTGATGTAAAATCGCCAGAATTAATTTTCAGCAATGACGAATTGCGACAAAATATCGGAAGAGTAAAGAAACGACGTCGTAAAAAGTTGTACGAACGATGCGGTGTTTGTCAATCTAAAGTGAACCTAAATTTTATGGGCAAACATCTCATATCCCATTACCATTGTAGAAAAGGAAACATTAATTCATCCCTAGCGAAATCCATGGTACTGGAAAACATTCTCGATATAGTTCTTCAATCACCATTTCAATGCAGCGTTTGCAAATTCTATTGCAATACTGTTAACACTTTTAATGAACATTGGAAATCGAAAATGCATTTAGATTCTGATAAAGAAGTAGACGGATATTATTCTTGCTCGTTTTGCAAAATTGAATGTAACACAACAGACGAAATGTTTACACATTTATCATCTCCAGAACACGTGGAAGTCGTCTCCGTCATCAATCGCTCAGTGCCAATTATCATCCAAAAAATTACGCCAAAAGCTTGTTTGACTTGCAATGAAAAGTTTGTGTTAAATATTGAACTTTTGCATCATTGTCGCGAACACAACCACGACATTTCAAATGTTGCGTTAAATGTTACAGATTTTATATGTCAACATTGTAATGCCAAATTTAGCTCAAATATAGTATTGCAACGACATCTGAAAAAAGTGcataaagaaaaatgtttcaCTTGTAGCATTTGTTTGGTAAAGTTCAAAGATGTTAACGAAGCCAAATTGCACAAAAGCAGCGAAGAGCACAAATTTAAGGTGGCTGCCACTAAGAGCGCGGAGCGAAGATGTGATTATTGCACTAGGGTGTTtgggaatatttttttgtacaagCAACATATCAAGGAGGAGCATTCACAACATATGTCCAAgTGTCCTCATTGTGGAGAAACCTTTGGCATCTCCCAAGATCTAACAGTCCATCTGCGCGAAAAGTTGTGCAAATTTGAGGAAAATCTTGGAAATTGTCACAGTTGCACCAAATGCCTCTACTCGACTAATTCCACTTCTGAAATGTTATTCCATGAAGCCCTTCATGATGATCCcatcaaaattgaattggaaaataaaaaacctaGTTATGAATATAAATGCCAACTATGTGGtaagtttttttcaaaatcatcatTGGAGGCCCATTTAAGAAACCATACAAAGGAATTGCCATTCGAGTGTAACATTTGTCACAAGAAATTTGCACGAAAAAATAATTGGGTTGTACATGAGAAGAACCATGGAAAGAAGAACAGAGTTGAAAAGGTGAAACCGGTAGAAGGAGAACGGCCGTTTTTGTGTTCAACTTGTGGAGCGAGCTTTGGGAAAAAATCCATTCTTCAGCAGCACATGCAAATACATACTGGAAAACTATGCAAATGTCCCTATCCTAATTGCATTTACACTGCAAGGAAAATCAGCGAAATTAAGCAACACTATTTATATCACACTGATATCAAACAGTTTTGCTGCACTCTTTGTGATTACGCTGGAAAAACTAAGCGACAACTTAACAGACATATGACTGTCCATGAAACAATAAAGAAATACAAATGTCCACACTGCTCATTTTCCGCCAGAATATCGGGACATTTGAAAAGGCATGTTCGCTTGCATACAGGGTCGAAACCATACAGTTGTCCACATTGTAAATACAAGTGTGTTTCCATTGAGAATTTAAGAAAACACATCCTGTCGACAAACAAACATCAAGGCAAATCAATTTACCTATGCAAGTTCTGCAATGAGGATCATTTCCAGACCAACTTTGCAAAAGATTTTAAGGTTCATTTGGTCACACAGCATGCTGAAATGTTTGCAAGTAGCATTGAGGCATCCACTTATGTTGCCGGAATCTTCGACATGCAAGCCGATTCCacatatttaaatgatttcGACGACATGGAAGTGCAACCCTCAGACAATAGCAGTTCATCAAACCCAGCTGCCGAAACGAGAAAAATTGAGCGCACCAACTACAACATCATGACCCTAAAAACAGACGTCGATCCGATTGTATCGCAATCATACCGCGATAAGAATTTGGATGAAATGCTACCAATGTATGTGATTTCGAAAGAAGAAATTGTCAATGCTGAAAATTCCGATTCGTGGAATCTAGTCGGACGTTACGACGTTGAGGAATCGGGCGTTCTGGTGCCGTTCCAAAGTGTCGGCGATACCTTGTTTCAGGAAcactttcaataa
- Protein Sequence
- MIEDFEDDTHFCLKCHSTIIGLDNYVNHRKTTCGKITESFKSPLSDQLIAPDEPFALKADDFFSSLELQSSSKKVQTHSTSGKSFGVLTRSKTAGIQATCTNKEQSDANQSKSGKNVWIGGDHLKELDDADNETKLIKAVDNLEQRKEEPATIQAYEASDDESVDFDYDDDEVLSDDEDAPPRNYTGGKWKPTSPVPWNWSNSYSSYTGCKWKPLINNKAKWKPRNENDNEYSADVPPANYTKGKWKPMNESQDYPPANYTKGKWKPKSDNDSDIPSPSHTKGKWKPKSEIEEETKPSIKVRNVLKDLDIQPVPGPSKVNPLKKTTPITKEKDDLKMEIEESTSYTKPKQSFSKGKWYPQQETSPIKLLKYSPLRKSSGMVQYWCNSCNRRLASKVVYERHLKSELHFKRSLQEREFDDGVNMNLLSDVKSPELIFSNDELRQNIGRVKKRRRKKLYERCGVCQSKVNLNFMGKHLISHYHCRKGNINSSLAKSMVLENILDIVLQSPFQCSVCKFYCNTVNTFNEHWKSKMHLDSDKEVDGYYSCSFCKIECNTTDEMFTHLSSPEHVEVVSVINRSVPIIIQKITPKACLTCNEKFVLNIELLHHCREHNHDISNVALNVTDFICQHCNAKFSSNIVLQRHLKKVHKEKCFTCSICLVKFKDVNEAKLHKSSEEHKFKVAATKSAERRCDYCTRVFGNIFLYKQHIKEEHSQHMSKCPHCGETFGISQDLTVHLREKLCKFEENLGNCHSCTKCLYSTNSTSEMLFHEALHDDPIKIELENKKPSYEYKCQLCGKFFSKSSLEAHLRNHTKELPFECNICHKKFARKNNWVVHEKNHGKKNRVEKVKPVEGERPFLCSTCGASFGKKSILQQHMQIHTGKLCKCPYPNCIYTARKISEIKQHYLYHTDIKQFCCTLCDYAGKTKRQLNRHMTVHETIKKYKCPHCSFSARISGHLKRHVRLHTGSKPYSCPHCKYKCVSIENLRKHILSTNKHQGKSIYLCKFCNEDHFQTNFAKDFKVHLVTQHAEMFASSIEASTYVAGIFDMQADSTYLNDFDDMEVQPSDNSSSSNPAAETRKIERTNYNIMTLKTDVDPIVSQSYRDKNLDEMLPMYVISKEEIVNAENSDSWNLVGRYDVEESGVLVPFQSVGDTLFQEHFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -