Cacu024015.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- -
- Assembly
- GCA_963556235.1
- Location
- OY744570.1:172998-182703[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.019 2.1 9.7 0.2 3 20 233 250 232 258 0.95 2 22 1.3 1.4e+02 4.0 0.8 5 21 263 278 260 279 0.82 3 22 0.023 2.5 9.4 0.0 1 23 314 337 314 337 0.93 4 22 0.83 89 4.5 0.8 2 23 396 418 395 418 0.96 5 22 1.6e-05 0.0017 19.3 1.3 2 23 425 446 424 447 0.95 6 22 0.0023 0.25 12.6 4.9 1 23 452 474 452 474 0.97 7 22 0.00013 0.014 16.5 1.2 1 23 483 506 483 506 0.94 8 22 0.00014 0.015 16.4 0.2 1 23 511 533 511 533 0.96 9 22 0.00047 0.05 14.8 2.7 1 23 539 562 539 562 0.98 10 22 0.00087 0.093 13.9 1.9 1 21 581 601 581 602 0.95 11 22 0.047 5.1 8.5 6.2 1 23 608 630 608 630 0.97 12 22 0.25 26 6.2 1.1 1 21 794 814 794 815 0.95 13 22 0.028 3 9.2 1.2 3 23 823 844 822 844 0.93 14 22 0.014 1.5 10.1 1.5 2 23 849 870 849 870 0.97 15 22 0.0054 0.58 11.4 4.1 1 23 876 899 876 899 0.96 16 22 3.8e-05 0.004 18.2 1.2 2 23 905 926 904 926 0.98 17 22 0.23 25 6.3 0.7 1 22 981 1002 981 1005 0.88 18 22 0.072 7.7 7.9 1.5 2 20 1011 1029 1010 1031 0.94 19 22 0.46 49 5.4 0.3 2 23 1043 1065 1042 1065 0.91 20 22 0.39 42 5.6 0.7 2 23 1293 1314 1292 1314 0.96 21 22 0.0016 0.17 13.1 0.8 1 21 1475 1495 1475 1496 0.95 22 22 2.2 2.3e+02 3.2 0.9 1 12 1549 1560 1549 1562 0.91
Sequence Information
- Coding Sequence
- atgcataacGGCAGTGAAATGTTGCATTTATGTCGACTCTGTTTAGTGAAAGACAAAGTGAACATACCAATATTCGCTGAACAGGACGATTTACGCCAGATATTCGTCAAAATCAGCTCGTGTCTACCGGTAACGGTTCAACGAGAGGATCAACTGCCTAAGAACATTTGTGATGGATGTTCGTACAAATTAGACTTACTATACGAATTCTGCAACACGAGCGTGAATTCGGAAAAACAACTACTGCAATGGATACGAACGCAAAATCCCACGGCCAGCAAAGCTGGAACCACTTCGACAAAAGACAATGACATAATCAAACAGGAAGCCTTAGATCCGAGCGAGCCGGCGGTGGCGCTCGATGACAAACCGGATTTGAATTTGTTCGATGTCGAGCCCGAAATGGTCGAAGAGCCGCCGTTCAAAAAAACGAAACGTGCGGCAGCGCAAAAAGCGGCTATTGCAACGCAAATTGAAGTGACCCCGGATAGTGACGATGAAGATGACGACAATTTCGACGCGGACGCCATTGCTAAAATGGAAGATGAAAGTGACGATTCGGATGCGGAGGGAGAAGGCGAAGAAGACTTAGAAGAACCGGCGTATGTTGAAGTGCCATCGGCCAATGTAGAGGCGCAACCGGGACCATCTGGCTTAGGCAAGGATGGCGTCGAAGCACCGTTCGCCGATGTGCTATGCAGTTATTGTAAGAAATTATTTGATGATGAAGAAAGTTTACGCACTcatttagaaaatttagaaGCGCACATTAAAGCGTTTTGTAGTCATTGCAAAAGTTTCACGCGATCCGATGAAGTTGAAAGACATTTGAATGTGACGTATTCGTGTACGCTTTGTAAGCTTATTTTAGATAATGATTATCTTTCCCATACGTGTTTGCATTCGATGAAGGCGACGATGGCAGCACAAGAACGGCGACATGAATGTGGTGTTTGCGAGAAGGTATTTTTTACAGCGCCTGATATTGAGCTGCATATTAATGATGCACATCGTACGATTCGCTGCGAATATTTTTGCAAGTGTTGCAACGTGTATTTCGATACCGTGCTCGATTATAATGAGCATATGACTAATCACACAGAATTGTTAACTGATTTTGCTATCGACGACTATtgcaatgcaattattaatcTCAAAGAAAGCGTTGATTTAGATAGAAGTTTGTATTGTAAGGTTTGTAAGGAGTGGTTTGAGACTTTGCGATTGAAGGAGATTCACATGAAGACGCGACATGCAAGCAATTTCAAAGTAAAATGCCCTGAATGCAACAAAGGCTTCTACAGAAACTCGGATTATAGACAGCATTTGGATGTTCATCATAAAGGCAACACTTTTAATTGCTCTCATTGTAATAAACGATACTTTGCCAAGTCGAATTATAAAAAGCACTTGGAAGTGCATGATAAAACTGCAATCCCAGCGCGATTTCCTTGCATCCATTGTAATAAAATCTATGCTAGACGTGATAGTTTGAATAAGCACATTCGGTCCATTCACGACAATCGCAAGTTCATATGCGATGTTTGTGGAAAATCAATAAACAGTCAAAGTAGCTTGAACGATCACAAAATGCTTCACACCGGTGAGAAACCATTCAAATGCAAAAGCTGTGCGAAGGCGTTCAATAAGCACAGCCTTTTGAAAGCGCATCTTCAGCGGATCCATTCAAAAACGAGCAATAGATGGGCCGAATTTATCGATGGTTCAGAAGCACCAAAATACCAATGCGGAGTGTGTTTTGAGGTGTTTCCAACAAAGTCGCATTTCTTGAAACACCACATGAATTTGTATGGACAATTGTTTACGTGTTGTAGATGCGATCAAAGTTTCATCAATTGCACGCAGTTGTACCAGCATTACGAGATCCATAAACTGGAGACGATGTTGGTGGATGAGACTACTGAGGGTTCGGTCGAAGAGATCGTCTTGAACTATCAGGACGAGGAAGAAGAAGTGGAGCAATCGGTTATAAGCGATTCGAATGAGTTGATGTACATTCTGGATGATGCACAATGTGTGAACGAAGTGGTCATCGAAGAGGATGACCCTCAATTGCTGTCCGATAGCCAGAAAATGAAGTCGGAAGCTTTACGAATTGTTAAGTTGGAGCATGGTTACATGATGCCTAGTGGTAGTAGTGTGGAGGAGCAAAACGATGAAGAAGACGAGACAATTTATGATGACCATAGTGTCGTCATTCGGAAAAGCATACCTTTCGCCAAAACAAATGCGTATCGAAAAGTAAGTACACCATCCAAACGGCGCAGCACTCCACTGTTGAAACGGAGACAAGTGCCGGACTTTTCGGCctcgaattatatttttattgccgCTAATGATGAGATTGAAGTGGCCCATTTCAAATGTTTGCGATGCGAACAGTTATTTATCAATAAGTTTGGATTCTTTAGGCATATTGAAAAGGGGAAATGCTATATTAACCATTGTGATGTATGTAGTGCTTCTTTTAGTAAAAATAGTGAATTTTTTGAACACTACGTGTCTGAACATTCAGAACGTgctgtttgcaatttttgtttCCGAACTTTTATGTATGAGAAGAATGTTAAGGAGCATATGCTTCGCCATTTGGATCAGTTTAGGCATCGTTGCGAGGATTGCAACAAGGGTTTCTACACTGTAAGGGAGTATAGGAatcattataaaaatagaCATATGGGAATTAGACAGAAATGTAATATTTGCAGTAGGAGCTATGCGGATCAGTACTATTTCAAAAGACATTTGGCCACACATGCTAATAATGATACTATTTTACAATCCAGATTAACTAGGTCAAGAAAAGGCAAAACGGAACACTTCTCCATAGACAAATACGTTCCTAAAACTCTACAAGTGCGACTGTCTAAAGTCGACCTGAACAAACCGTTAGATAAACTAAATTGCTGTGTTTCAAAATACACGTGTTTGCCATGCAACGAAACCTTCTCCACCATCTACTTGATGGAACACCACAGACAAAACGTTCCACATTCCAAATATGTACTGAAATGTTCCTACTGTAAAGTCACCTTTAACACTTGCAACTTATTTTATACACACATTGGCATCCAAATTTACGGCAAAGGATCTTGTCATCATATTGAATGCGACATTTGTAAACGCGTCTATCTCAACTACTTTGAGCTTTTGAAGCATAAAGTCATGAACCACAAGGACCATGTGTTAAATGACGTCAAAGATGATGTAAAGAAGAAGGTTGCGAAAAAGTCTACAAGTAAACCTTCAAAAAGTCCCACTCGAAAGCGATCTAAAAGTCCTACAAAACCTATTAAAATTGTCACCCCGAAAACTGTTAAAAGTCCTCCTCCCAAACCCTTCAAAAGTCCTCCTCCCAACACCAGATCTTCTAAAAGTCCTATCACCAGATCTGCTCAAACCTCTCCAACTAAATCTCCGTCGACCAATAATCTGGAGCCTCCAGAAACCTTTGAACTGAAAAACGAATCCTTTCACATTGCCTCCAGCGATGATGATGACGAAATTGAAACCATACAAGATACCACTGTTTCAACCATTGAGCAACCGTTAAACGTGACTCCAGAAAATGGTTTCGGTATAAAAATTGTGAGCACTGAGTCAATCTTTGAAGAAGGGAACGATATGAATATTCAAATAGTGAGCACTGAAACTGTGAAAGAATCTCGCGCTATGGCTGTGGCTGGCACTGTTCTGTGTGAAGCTTTGGAAACCATGAAGCCTCAAGCAAATGGCGTTGCAGAGTTAAATGTGGTGCCTGCAAAACCGGCCGTTATTGAGAAACCCGTTGCGCAAGTGATGGTGTTACAACATGCAGTTGTACCGCCAGAGTATTTAATCTCACGTGATGATTTAACGTGCGAAATTTGCTACGATGAGTTTCATTCCAAGGAAGAGTTGGACCAACACTTGAATCTTCATAAGAAGTTGGTGAAGTTTTCCAATAATACTCCATCCGAACATGTGGCTTGCTCGGATGATGAAGATGTGGTGGAAATAGTCGACACAAGTGATACATATAATATTGTTACTACTTTGAAAACCAAACCTAAGAGTATTCCAATGAAGAATGTTCAACCTCCGACCAAGAAGAGGAAAACGCTTGATTTGGCCCCAGTTCGTTGTAAGGTAACTTCACCACCTACAGCGGTTGTAAATCCTGCACCACCTCGTCCGATTATTGCAACCCCAAATGAAAaccaaacatattatttagtCCCTTTCGCAAATACGTCTAAACTTGTTCCGATACCAAGTGCTGCAAGTGCTAAACCTGTTCAATACTCTCCATTCAAATTGAAACCCCCTGAAGAGCCCAAACCTATTCAACCGACAGTCATAGTAACACCAAAGGCAAAAGACTCGAAAGCAGCGACTGCTAATAAAAAGTcaaacaaaaactataaatgCAGAGTTTGCAATACGGAATTTCGACGCGTGAAATCGTTGCGTTTGCACATATCCAAACAATTGGCCTGCTCGTATGGAAGCTGCAGTTTTGTGACTTGCAGAAAATTGGAATGGAAGCGACATTATCAAGACAAACACAAGTTGTTTGCTTGTTCGCGTTGCTCGAGTGTTATGAGCTCAGTCAAAGACATGGACTTTCATTACATGCAAACCCATCAATGCCCAATATGTCGGCATTTCTTTAAAGATGTAACTTTGCACGAGTGTAGTGAGAAGCTGAAACTCAAAAAGGTAGAACCTTCAGTGGTACCACCACCTCAACCTGCCAAGGTCAATGTGGTAGCCCCTCGAAGGAGCTCTTCGAGTCTTAGATTAGTTATTGATATTGATAGCGATTAA
- Protein Sequence
- MHNGSEMLHLCRLCLVKDKVNIPIFAEQDDLRQIFVKISSCLPVTVQREDQLPKNICDGCSYKLDLLYEFCNTSVNSEKQLLQWIRTQNPTASKAGTTSTKDNDIIKQEALDPSEPAVALDDKPDLNLFDVEPEMVEEPPFKKTKRAAAQKAAIATQIEVTPDSDDEDDDNFDADAIAKMEDESDDSDAEGEGEEDLEEPAYVEVPSANVEAQPGPSGLGKDGVEAPFADVLCSYCKKLFDDEESLRTHLENLEAHIKAFCSHCKSFTRSDEVERHLNVTYSCTLCKLILDNDYLSHTCLHSMKATMAAQERRHECGVCEKVFFTAPDIELHINDAHRTIRCEYFCKCCNVYFDTVLDYNEHMTNHTELLTDFAIDDYCNAIINLKESVDLDRSLYCKVCKEWFETLRLKEIHMKTRHASNFKVKCPECNKGFYRNSDYRQHLDVHHKGNTFNCSHCNKRYFAKSNYKKHLEVHDKTAIPARFPCIHCNKIYARRDSLNKHIRSIHDNRKFICDVCGKSINSQSSLNDHKMLHTGEKPFKCKSCAKAFNKHSLLKAHLQRIHSKTSNRWAEFIDGSEAPKYQCGVCFEVFPTKSHFLKHHMNLYGQLFTCCRCDQSFINCTQLYQHYEIHKLETMLVDETTEGSVEEIVLNYQDEEEEVEQSVISDSNELMYILDDAQCVNEVVIEEDDPQLLSDSQKMKSEALRIVKLEHGYMMPSGSSVEEQNDEEDETIYDDHSVVIRKSIPFAKTNAYRKVSTPSKRRSTPLLKRRQVPDFSASNYIFIAANDEIEVAHFKCLRCEQLFINKFGFFRHIEKGKCYINHCDVCSASFSKNSEFFEHYVSEHSERAVCNFCFRTFMYEKNVKEHMLRHLDQFRHRCEDCNKGFYTVREYRNHYKNRHMGIRQKCNICSRSYADQYYFKRHLATHANNDTILQSRLTRSRKGKTEHFSIDKYVPKTLQVRLSKVDLNKPLDKLNCCVSKYTCLPCNETFSTIYLMEHHRQNVPHSKYVLKCSYCKVTFNTCNLFYTHIGIQIYGKGSCHHIECDICKRVYLNYFELLKHKVMNHKDHVLNDVKDDVKKKVAKKSTSKPSKSPTRKRSKSPTKPIKIVTPKTVKSPPPKPFKSPPPNTRSSKSPITRSAQTSPTKSPSTNNLEPPETFELKNESFHIASSDDDDEIETIQDTTVSTIEQPLNVTPENGFGIKIVSTESIFEEGNDMNIQIVSTETVKESRAMAVAGTVLCEALETMKPQANGVAELNVVPAKPAVIEKPVAQVMVLQHAVVPPEYLISRDDLTCEICYDEFHSKEELDQHLNLHKKLVKFSNNTPSEHVACSDDEDVVEIVDTSDTYNIVTTLKTKPKSIPMKNVQPPTKKRKTLDLAPVRCKVTSPPTAVVNPAPPRPIIATPNENQTYYLVPFANTSKLVPIPSAASAKPVQYSPFKLKPPEEPKPIQPTVIVTPKAKDSKAATANKKSNKNYKCRVCNTEFRRVKSLRLHISKQLACSYGSCSFVTCRKLEWKRHYQDKHKLFACSRCSSVMSSVKDMDFHYMQTHQCPICRHFFKDVTLHECSEKLKLKKVEPSVVPPPQPAKVNVVAPRRSSSSLRLVIDIDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -