Cacu015419.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- ZFX
- Assembly
- GCA_963556235.1
- Location
- OY744563.1:8940972-8942493[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0013 0.14 13.4 7.4 3 23 157 177 155 177 0.96 2 11 3.2e-05 0.0034 18.4 2.2 1 23 183 205 183 205 0.98 3 11 9.3e-05 0.0099 17.0 1.4 1 23 211 233 211 233 0.98 4 11 0.00036 0.038 15.1 0.4 1 23 239 261 239 261 0.98 5 11 0.0035 0.37 12.0 0.5 1 23 268 290 268 290 0.98 6 11 0.00085 0.091 14.0 0.8 1 23 296 319 296 319 0.92 7 11 6.7e-05 0.0072 17.4 5.4 1 23 325 348 325 348 0.95 8 11 6.6e-05 0.0071 17.4 0.2 3 23 359 379 358 379 0.97 9 11 1.4e-05 0.0015 19.6 1.5 1 23 385 407 385 407 0.98 10 11 1.6e-06 0.00017 22.6 1.1 1 23 413 435 413 435 0.95 11 11 5.9e-07 6.3e-05 23.9 0.8 1 23 441 463 441 463 0.98
Sequence Information
- Coding Sequence
- atggaaattttcgcAAAATACGAGCACATTCAAATCGAAGAAGTATGTCGGATTTGTTTGACGAAAAAGGAGCAGATGAGCTTAATCTACGAAGCGGGCCTTGCAGATATGCTCTTAGAATGTGCCTCTGTGCAAGTTACCCCAGAAAATGGCTTATTCAACCTCGTTTGCAGCGAATGTGCGAACGAAGTAAGTCGGTGGTACATATTCAAACAACAAATCACAAAATCATTCGAAATCGGTCGCTGGTTGCTTCAGAAGAAAGAGCGAAACGACATTACAATTACAATTCCAGCTAAGAAAAGCGAGGAAGTCGCTTTCCAGGCTGTAGAAGACCTATTTAACAATGAATCAAATCCAAATCAAACGTTCTATCACTCCAATACAgataatcaaacaattttcaaaGAGAGTTGCAGTAGTTCAAGCAAAgaaatcaaaaccaaaaagcaaaattcaaaaatttgttgcaaaatatgCAACAAGCAGTGTTCATCGACGAATTCTTACAATCGCCATATGAAGACACATGAAGATACACGTCCCTACATTTGTTGCAAATGCGACAAGCCTTTCAAAACTTCCCAAGTTTTGGCCGAACATATGAAACGTCATTATGACGATCGCAgacataaatgcaatttatgcGGGCAGAAATTCTACGCAAGGGCTGGTTTAACTGACCACTTGCGAAGCCATTCGGGTGAAAAGCCCTTTAAATGCGAGGTTTGCAAGAAGAATTTTGGCACCAAAGCGATTTTAAGGCAACATTTGATTGTCCATACAGTTCGCGAAAAGAAATACGAATGTGACATTTGCGGAAAATACCTTCTAACTACCGGCAGTCTTGAAACGCATAAACGCAAACACACTGGGGTGAAACCATTCGCTTGCACAGCTTGCGAAAAAAGTTTCTTTACGAAAGAATCAATGCAACGCCACTATAGTGCCATCCACGATATAGACAACAATTTCTTATGCAACGTTTGTTCGAAAGTGTGCTCAACCAAAGTGCACTTGAACAACCACATGAATAAAAAACATCTAGGATTAGGCAAACCTTCGAATGCAATTTGCACGGATTGCGGGAAACAATGTGGATCGGCTGCGGAATTAAAAGTGCATGTACGAGTGCATACAGGTGAAAGGCCGTATGTTTGTGATATTTGTGATAAGCGATTTATAGCGAAAGGGAATTTAAATTCGCATAAACATCGCCATACAGGGCATAAGCCTTTTTTGTGCAATCATTGTGGGAAAGCTTTTGCGGAGAAGAGCACTTTAAAGGTGCATGAGCGAATTCATACTGGGGAGCACCCATTTAAATGTACTGTTTGCGAGAAGAGTTATGTGCAAAGTAGTGCTTTGCGAACCCATTTGAAAATTCATTGGAAACagtag
- Protein Sequence
- MEIFAKYEHIQIEEVCRICLTKKEQMSLIYEAGLADMLLECASVQVTPENGLFNLVCSECANEVSRWYIFKQQITKSFEIGRWLLQKKERNDITITIPAKKSEEVAFQAVEDLFNNESNPNQTFYHSNTDNQTIFKESCSSSSKEIKTKKQNSKICCKICNKQCSSTNSYNRHMKTHEDTRPYICCKCDKPFKTSQVLAEHMKRHYDDRRHKCNLCGQKFYARAGLTDHLRSHSGEKPFKCEVCKKNFGTKAILRQHLIVHTVREKKYECDICGKYLLTTGSLETHKRKHTGVKPFACTACEKSFFTKESMQRHYSAIHDIDNNFLCNVCSKVCSTKVHLNNHMNKKHLGLGKPSNAICTDCGKQCGSAAELKVHVRVHTGERPYVCDICDKRFIAKGNLNSHKHRHTGHKPFLCNHCGKAFAEKSTLKVHERIHTGEHPFKCTVCEKSYVQSSALRTHLKIHWKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -