Basic Information

Insect: Cryptophagus acutangulus
Gene Symbol: -
Assembly: GCA_963556235.1
Location: OY744568.1:1749527-1751092[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0028 0.3 12.3 0.1 2 23 36 57 36 57 0.97

2 16 0.31 33 5.9 5.2 1 23 61 83 61 83 0.98

3 16 7.4e-05 0.008 17.3 0.5 1 23 89 111 89 111 0.98

4 16 0.00018 0.019 16.1 0.4 1 23 117 139 117 139 0.94

5 16 7.9e-05 0.0085 17.2 0.5 1 23 145 168 145 168 0.98

6 16 5.9e-05 0.0063 17.6 5.4 1 23 174 196 174 196 0.97

7 16 0.0038 0.4 11.9 0.7 1 23 202 224 202 224 0.98

8 16 0.0017 0.18 13.0 0.3 3 23 258 278 257 278 0.97

9 16 0.00014 0.015 16.4 2.0 1 23 286 308 286 308 0.98

10 16 0.00013 0.014 16.5 0.1 1 23 315 337 315 337 0.98

11 16 6.4e-06 0.00069 20.6 0.9 1 20 343 362 343 365 0.94

12 16 1.9e-05 0.002 19.1 1.2 1 23 371 393 371 393 0.98

13 16 0.0019 0.2 12.9 5.0 1 23 399 422 399 423 0.95

14 16 0.55 59 5.1 3.3 1 21 429 449 429 450 0.94

15 16 0.15 16 6.9 0.3 2 23 459 482 458 482 0.87

16 16 0.00055 0.059 14.5 3.4 1 23 489 512 489 512 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0028	0.3	12.3	0.1	2	23	36	57	36	57	0.97
2	16	0.31	33	5.9	5.2	1	23	61	83	61	83	0.98
3	16	7.4e-05	0.008	17.3	0.5	1	23	89	111	89	111	0.98
4	16	0.00018	0.019	16.1	0.4	1	23	117	139	117	139	0.94
5	16	7.9e-05	0.0085	17.2	0.5	1	23	145	168	145	168	0.98
6	16	5.9e-05	0.0063	17.6	5.4	1	23	174	196	174	196	0.97
7	16	0.0038	0.4	11.9	0.7	1	23	202	224	202	224	0.98
8	16	0.0017	0.18	13.0	0.3	3	23	258	278	257	278	0.97
9	16	0.00014	0.015	16.4	2.0	1	23	286	308	286	308	0.98
10	16	0.00013	0.014	16.5	0.1	1	23	315	337	315	337	0.98
11	16	6.4e-06	0.00069	20.6	0.9	1	20	343	362	343	365	0.94
12	16	1.9e-05	0.002	19.1	1.2	1	23	371	393	371	393	0.98
13	16	0.0019	0.2	12.9	5.0	1	23	399	422	399	423	0.95
14	16	0.55	59	5.1	3.3	1	21	429	449	429	450	0.94
15	16	0.15	16	6.9	0.3	2	23	459	482	458	482	0.87
16	16	0.00055	0.059	14.5	3.4	1	23	489	512	489	512	0.92

Sequence Information

Coding Sequence: ATGGACGAAACATCCGCATTCTACGACTTTATAACCATCAAAGAAGAACCGCTGGACATCCCCTGCGAAACCATCATCAAAACCGAAACCGAACCAACCCCTCCGACCTGCCCCATTTGCGCCGTACGATTCGTCAACCAACTCGAACTCCGCATCCACAACATGACCCACTCCGACAACCACACGTGCTTCGTCTGCCACGAATTCGTAAAGAATCGCTTCCAATTCGTCGGGCACGTTCGCAAACACATGTCCGCCAAACCGTTCGTGTGCGCGGAATGCGACCGCACATTCAGCAACGTTCGCGAAACGAAGCTACATCAACGCGTGCATTCGGACGAACGTCCGTTCACCTGCAACGAATGCGGCAAAGGCTTCAAAATGATGAATACGCTAAAGGACCACGAAGTGGTCCACACGAAAGTGAAACGATTCAAATGTAAGATCTGCGAAGGCTTGTTCGCGACATCGACGAGCCTTCGCAGACATGTGCGCGTCATGCACGAAGCGGTGCGCTCCTTCAAATGCCATTTTTGCCACGAGAACTTCACCAGCAAACAAGCGCTCAAGCAACACATGGTCATCCACAAGGATGTCGATCCGTTCAAGTGTCAGCTTTGCGGCGAGAAGCTGGAAAACCAGCAAGCGGTGCAGCAACATCGCAGCAAGCACTTCGAGCAGAAGCCGGCAGGCTTCTGCGATTATTGCGCGAACAACACCTTCTACTTCGGTTTGATCGAGCATGTCGAGAAAATGCATCAAGCGCGAAACTGCGAGATTTGCtcgttggttttcttcgacGCAAAGTCGATGGAGAACCATCTGAAGAGCCATCAAGGCGATGTGGGATCGCTGTACACTTGCAGCTTATGCGGCAAGCAATTCGAGTTCTTGCGATATTTGCGAGCGCATTCGAAACGCCATGACGACAATTACAAGAAGTATAAGTGCGATTTGTGTGCGAAGGCCTTTAGCGCTCGGCGCGATTTAAACGATCATTTGCTGGTGCATTCGGATAGCAAGAATTACAAATGCGAGGTGTGCGATAAATCGTTTCGGACAAAGCAAAGTGTGAGTAAACATATGCCGATCCATTCGGATAAGCGACCGTTCCGTTGCACAGTTTGCCCGAAAATGTTCAAACGGCAAGCGATCCTTCGCAAGCATTTGTCGTCGCATTCGCACAGTCGCCCATTCGCGTGCAAATTGTGCAAGAAGACGTATAAGTCGCATGAAGGCTTACGCGTGCATAAAATGTCGCAGCATCACAATTTTGGTGGGAAGTATCATTGCAAATTTTGCGGTGGCTTGTTTGCGTTTGTTAGTTTGTACAAAAGGCATCAATGCATGTCGCGAGTTGGTCGCAGAGCGAAGAGGTGTCAAATTTGTggtattaaaagttttaagtcATTTTCTAGTCGGGCGTTGCATGTACTTGCGGTACATTTTTCTAGTAACGTTCAATATAAGTGTCATGAATGTAGTTTGGATTTTAAGTACAAGTATAGTTTGAACGTACATCGGGTTTTGTATCATAAGAGGAGGAAGTTGCGTGTAGTcaaatag
Protein Sequence: MDETSAFYDFITIKEEPLDIPCETIIKTETEPTPPTCPICAVRFVNQLELRIHNMTHSDNHTCFVCHEFVKNRFQFVGHVRKHMSAKPFVCAECDRTFSNVRETKLHQRVHSDERPFTCNECGKGFKMMNTLKDHEVVHTKVKRFKCKICEGLFATSTSLRRHVRVMHEAVRSFKCHFCHENFTSKQALKQHMVIHKDVDPFKCQLCGEKLENQQAVQQHRSKHFEQKPAGFCDYCANNTFYFGLIEHVEKMHQARNCEICSLVFFDAKSMENHLKSHQGDVGSLYTCSLCGKQFEFLRYLRAHSKRHDDNYKKYKCDLCAKAFSARRDLNDHLLVHSDSKNYKCEVCDKSFRTKQSVSKHMPIHSDKRPFRCTVCPKMFKRQAILRKHLSSHSHSRPFACKLCKKTYKSHEGLRVHKMSQHHNFGGKYHCKFCGGLFAFVSLYKRHQCMSRVGRRAKRCQICGIKSFKSFSSRALHVLAVHFSSNVQYKCHECSLDFKYKYSLNVHRVLYHKRRKLRVVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -