Basic Information

Insect: Cryptophagus acutangulus
Gene Symbol: -
Assembly: GCA_963556235.1
Location: OY744571.1:1394146-1395950[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.61 66 5.0 3.3 1 23 75 97 75 97 0.97

2 16 0.031 3.3 9.0 4.2 2 23 103 124 103 124 0.98

3 16 0.00016 0.017 16.2 5.9 1 21 130 150 130 152 0.96

4 16 4.6e-06 0.00049 21.1 0.4 1 23 158 180 158 180 0.98

5 16 0.0066 0.71 11.1 0.4 1 23 187 209 187 209 0.97

6 16 9.8e-05 0.011 16.9 1.3 3 23 217 237 215 237 0.96

7 16 0.0013 0.14 13.3 0.5 1 23 242 265 242 265 0.97

8 16 0.0029 0.31 12.3 2.5 3 23 270 290 269 290 0.96

9 16 1.9e-05 0.002 19.1 1.4 2 23 297 319 296 319 0.95

10 16 6e-07 6.4e-05 23.9 1.3 1 23 326 348 326 348 0.98

11 16 9.6e-07 0.0001 23.2 1.2 1 23 352 374 352 374 0.96

12 16 2.2e-07 2.4e-05 25.2 3.2 1 23 380 402 380 402 0.98

13 16 0.0015 0.16 13.2 2.6 1 23 408 430 408 430 0.98

14 16 0.0001 0.011 16.8 1.3 1 23 436 458 436 458 0.98

15 16 0.0061 0.66 11.2 4.9 3 21 466 484 464 488 0.91

16 16 0.0095 1 10.6 0.1 2 21 502 521 501 524 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.61	66	5.0	3.3	1	23	75	97	75	97	0.97
2	16	0.031	3.3	9.0	4.2	2	23	103	124	103	124	0.98
3	16	0.00016	0.017	16.2	5.9	1	21	130	150	130	152	0.96
4	16	4.6e-06	0.00049	21.1	0.4	1	23	158	180	158	180	0.98
5	16	0.0066	0.71	11.1	0.4	1	23	187	209	187	209	0.97
6	16	9.8e-05	0.011	16.9	1.3	3	23	217	237	215	237	0.96
7	16	0.0013	0.14	13.3	0.5	1	23	242	265	242	265	0.97
8	16	0.0029	0.31	12.3	2.5	3	23	270	290	269	290	0.96
9	16	1.9e-05	0.002	19.1	1.4	2	23	297	319	296	319	0.95
10	16	6e-07	6.4e-05	23.9	1.3	1	23	326	348	326	348	0.98
11	16	9.6e-07	0.0001	23.2	1.2	1	23	352	374	352	374	0.96
12	16	2.2e-07	2.4e-05	25.2	3.2	1	23	380	402	380	402	0.98
13	16	0.0015	0.16	13.2	2.6	1	23	408	430	408	430	0.98
14	16	0.0001	0.011	16.8	1.3	1	23	436	458	436	458	0.98
15	16	0.0061	0.66	11.2	4.9	3	21	466	484	464	488	0.91
16	16	0.0095	1	10.6	0.1	2	21	502	521	501	524	0.88

Sequence Information

Coding Sequence: ATGGAAATTGCACCCGAACAAATTAAACTGGAAGCAAGCGGCAGTTCGAATGGAATAGTAAGTGCCATCATTAAAACTGAGGAGGTGATCGAAAGCGAAACCGATGAAACCGAACTCTCGCCATCCGATATTGAAAAGGAATTCGAGGCCGATTTTAAAACCGAAGACGACAAATCCATCTGCACGGACAATGGCGGTGTGTTCGAAAACAACACGACCGTTTACCACTGTCAAATATGTCGCGACGTCTTTGGCGAATTCAGCGACTACAAAACGCATCGAAAGCAGCACTTTATTGAGAAACGACGCTGTCACATGTGCAAAATGGTGTGCCAAAGTATCAGCAAATTGGAGGTGCACATCAATCGGCATTTGGGGTTGACGCCGTACAAATGTAACATTTGCGATAAAGGTTTCACGTCCAAACACCAAGTGAAACTGCATCAGCGATGTCACAGCACCGAGTTGCGGTACAAGTGCGATAAATGCGAGAAGGCGTTCCGCAATTTGGGATCGCTTAGAAGTCATGCTTTGGTCCATCAGGAGAAGATCAAGGAGTTTATTTGCAAGATTTGCAATCAAGACTGCGAGGCGTTACCAGCCTTACGAAAACACATGGAAAGCCACGGGAAAAAATCCGAAATAATTTGCGGCGTTTGTCACAAAACATTCGTAAGTGATCGTCACTTACAAATCCATCTAGCCACACACAAAGACCTGCAATTTCCATGCGAGTTTTGCGGCAAAATCTACGAATCAATGTATCGAATTAAGCGACATATTAAACGCGCACACATTCCGAATCACTGCGAGGAATGCGACGAGATTTTCTACGACCGCACAATGTTCACCAAACATAAGAAAGAGCATGCGGCGGCCAAAGCTTTAACGTGCAAGTTTTGCAACAAGTCATTCGACAAGGCGAAAAATCTGAGCGAACATATCCGCTTGCAGCATAAAGGTGACGGCAGCAAACACACATGCAGCATCTGCGAGAAGGAGTTCATTAATGCTagtcttttaaaaaatcacatTAAAACGCACGACAAATGTTTCAAGTGTACAAATTGCGACAAGGTGTTCAGTTCGCGGTATAATTTAGAGATCCATTCGGTGACGCATACGGGCGCGCGCAACCACAAATGCGACATTTGCGGGAAATCGTACTCGACGAAAAGTAGTTTGAAAAATCATAAAGCAACGCACACGGAGACGCGAACCTTCCAATGCACGCAGTGTCCCAAGTTGTTCAAGACCAATCGGCGATTGTACGTTCATAAGTTGTCGCATCGCACGGAGGAGAAGTACGAATGCGATATTTGTAATGCCAAGTTCCGGGTCAAGCAGTACTTGAAGTACCATCAGATCAAGCACTCGAATGAGAAGCCGTTTGGTTGTGACGTTTGCAAGAAGCGATTCAAGCACAAGAAGTCGTACGACAAGCATATGCATTTGGGACGTCACAAGAAAACGGCTGAGGGCGGCGAGGAAGAGGACGAGCTCGAATGTAGTTTTTGTGATGAGACTTTTGCGAAGCGGGGTTTGTTGTTGGATCATTTTGATGAGGTGCATCAGAAGGATGGCGATGCGGGAATTGACGACACTTTGTTGAATGATGGGGATTCGGACGATATGTTGATGAAGATGGAAAATCAGCAGATTGACAATGAAGTGAAAAGTATTAAGATGGAGATCCTCGGTGATAGTGATGTAATTGTGAAGAATGAACCAGTCGTTTAG
Protein Sequence: MEIAPEQIKLEASGSSNGIVSAIIKTEEVIESETDETELSPSDIEKEFEADFKTEDDKSICTDNGGVFENNTTVYHCQICRDVFGEFSDYKTHRKQHFIEKRRCHMCKMVCQSISKLEVHINRHLGLTPYKCNICDKGFTSKHQVKLHQRCHSTELRYKCDKCEKAFRNLGSLRSHALVHQEKIKEFICKICNQDCEALPALRKHMESHGKKSEIICGVCHKTFVSDRHLQIHLATHKDLQFPCEFCGKIYESMYRIKRHIKRAHIPNHCEECDEIFYDRTMFTKHKKEHAAAKALTCKFCNKSFDKAKNLSEHIRLQHKGDGSKHTCSICEKEFINASLLKNHIKTHDKCFKCTNCDKVFSSRYNLEIHSVTHTGARNHKCDICGKSYSTKSSLKNHKATHTETRTFQCTQCPKLFKTNRRLYVHKLSHRTEEKYECDICNAKFRVKQYLKYHQIKHSNEKPFGCDVCKKRFKHKKSYDKHMHLGRHKKTAEGGEEEDELECSFCDETFAKRGLLLDHFDEVHQKDGDAGIDDTLLNDGDSDDMLMKMENQQIDNEVKSIKMEILGDSDVIVKNEPVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -