Basic Information

Insect: Cryptophagus acutangulus
Gene Symbol: -
Assembly: GCA_963556235.1
Location: OY744564.1:7649946-7651681[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.9e-08 3.1e-06 28.0 0.7 1 23 187 209 187 209 0.99

2 12 7.3e-07 7.8e-05 23.6 7.4 1 23 215 237 215 237 0.98

3 12 0.00014 0.015 16.4 0.4 1 23 243 265 243 265 0.99

4 12 4.9e-05 0.0053 17.8 1.6 1 23 271 293 271 293 0.96

5 12 0.00015 0.016 16.3 1.4 1 23 299 321 299 321 0.97

6 12 7e-06 0.00075 20.5 4.9 2 23 328 349 327 349 0.96

7 12 5.3e-06 0.00057 20.9 1.7 1 23 354 376 354 376 0.98

8 12 1.1e-06 0.00012 23.0 2.3 1 23 382 404 382 404 0.99

9 12 2.9e-07 3.1e-05 24.8 0.8 1 23 409 431 409 431 0.98

10 12 1.4e-07 1.5e-05 25.8 1.6 1 23 437 459 437 459 0.98

11 12 5.3e-08 5.7e-06 27.2 0.8 1 23 465 487 465 487 0.97

12 12 4.7e-06 0.00051 21.0 0.4 1 23 493 515 493 515 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.9e-08	3.1e-06	28.0	0.7	1	23	187	209	187	209	0.99
2	12	7.3e-07	7.8e-05	23.6	7.4	1	23	215	237	215	237	0.98
3	12	0.00014	0.015	16.4	0.4	1	23	243	265	243	265	0.99
4	12	4.9e-05	0.0053	17.8	1.6	1	23	271	293	271	293	0.96
5	12	0.00015	0.016	16.3	1.4	1	23	299	321	299	321	0.97
6	12	7e-06	0.00075	20.5	4.9	2	23	328	349	327	349	0.96
7	12	5.3e-06	0.00057	20.9	1.7	1	23	354	376	354	376	0.98
8	12	1.1e-06	0.00012	23.0	2.3	1	23	382	404	382	404	0.99
9	12	2.9e-07	3.1e-05	24.8	0.8	1	23	409	431	409	431	0.98
10	12	1.4e-07	1.5e-05	25.8	1.6	1	23	437	459	437	459	0.98
11	12	5.3e-08	5.7e-06	27.2	0.8	1	23	465	487	465	487	0.97
12	12	4.7e-06	0.00051	21.0	0.4	1	23	493	515	493	515	0.99

Sequence Information

Coding Sequence: atgaataatgtGTTCCAAGTACATTGTTGTCGTACTTGTCTACGATTAGAAGCAAGTGGAACAAGTATAAATGCGCTGGATGCAGACAACATTAAAATATCCGACAAATTAATTGCATGTTTCCCCGATGTGATATGGGACAAAGTAGGCTACTCGAATATACTTTGCGCTAGTTGTATAGAAAAGCTGCGAGTAGCTTACGAGTACCGACTGCAATGCATTCAATCCGACTCGTACTTGAACCACGATAAAAACTTCCCCAACACTAACTTGAACGAATTTCACATCGACTCTAGTAATTTGAAGCACTTACTTGACGATGGACTATCGAAGAGTAGCAGCAATTTGCCGGATGCCTCTAGAAGTGCCACTCCGGATTCGGTTGCGACCACTGGCTTTGCCAAGTACGAAAAGGCTGTAAAGAAAACAATCGTGCCGACTAGATCAATCAAGACGCAAACACAGCCTCTACCCCAATATTTAACCCTTACACCAGCCGCCGCGCGATTGGAAGCCCAACAAAGCAAAACGACAATCGTCGTCGAAAACCCATTCAAATTCGAATGCACCGAATGCGGCAAGAAGTATGCGAAGAACGCGAATCTCAAAATCCACATGCGAACGCACACGGGCGAGAAACCGTTCGAATGCAAGTATTGCGACAAGAAGTTCTACCATTCTTCGCATTTGCGCGAACACATTCGGAGGCACACGGGCGAGAAGCCGTTTCAGTGCCAGGTTTGCATGAAGCGATTCACAATCACTGCGGAATTGACGGTGCATATGCGGATTCACACTGGCGAGAAACCATATGCTTGCAATTGCTGCGACAAGCGATATATTAAAGCGAGCGATTTGCAAGTGCATATGCGATCGCACACTGGCGAGAAACCGTTCGCTTGCAATTATTGTGATAAGAAGTTCACGTCGGGGTATATTTTGAATTCGCATCTTAAAACGCATAcagGAGATCGACCGTGGCACTGTCAAGTTTGCTTAAAATCCTTTACACAATCCTCACATCTCACCGTGCATATGAAGAAACATACAGGTGAGAAGTTTACGTGTAAAGTATGCAACGCTGAGTTTATGCACTCATCGCAACTGACCGTACATATGCGAGAGCACACGGGAAAGCAGCCGTACAAATGCACGATTTGCGATAAAATCTGCAATTATGCGTCCGAGTTGCAGACGCATATGATGAAGCATACAGGCGAGAAGTTCAGTTGCTTGATGTGCGACAAGAAGTTTACAACCGCCGCGTATTTGCAGGAGCATATTCGCACACATACCGGCGAGAATTTGTTTAATTGCACGGTGTGCGATCGCGCGTTTACCAGGTCGACGTATTTGGAGAAACATTTGCGGACGCATACTGGGGAAAAGCCGTTCGCTTGTGTGGTTTGTGATAAGCGATTCACGCAATCGTCTTCGTTGAATGTGCATATGAGGAAGCATACGGGCGAGAAGCCGTACacttgcaatatttgcaatCGCGGTTTCGCCACTTCGGCGTATTTGTCGGGGCATTTAAGGAAGCACAAGAAGTATATTAATTTGTAG
Protein Sequence: MNNVFQVHCCRTCLRLEASGTSINALDADNIKISDKLIACFPDVIWDKVGYSNILCASCIEKLRVAYEYRLQCIQSDSYLNHDKNFPNTNLNEFHIDSSNLKHLLDDGLSKSSSNLPDASRSATPDSVATTGFAKYEKAVKKTIVPTRSIKTQTQPLPQYLTLTPAAARLEAQQSKTTIVVENPFKFECTECGKKYAKNANLKIHMRTHTGEKPFECKYCDKKFYHSSHLREHIRRHTGEKPFQCQVCMKRFTITAELTVHMRIHTGEKPYACNCCDKRYIKASDLQVHMRSHTGEKPFACNYCDKKFTSGYILNSHLKTHTGDRPWHCQVCLKSFTQSSHLTVHMKKHTGEKFTCKVCNAEFMHSSQLTVHMREHTGKQPYKCTICDKICNYASELQTHMMKHTGEKFSCLMCDKKFTTAAYLQEHIRTHTGENLFNCTVCDRAFTRSTYLEKHLRTHTGEKPFACVVCDKRFTQSSSLNVHMRKHTGEKPYTCNICNRGFATSAYLSGHLRKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -