Cacu009921.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- ZNF236
- Assembly
- GCA_963556235.1
- Location
- OY744559.1:11558111-11564593[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.065 6.9 8.0 3.6 1 23 97 119 97 119 0.97 2 26 0.0032 0.34 12.1 0.4 1 23 125 147 125 147 0.98 3 26 0.00016 0.017 16.3 0.2 2 23 153 174 153 174 0.98 4 26 0.00025 0.027 15.6 0.1 1 23 180 202 180 202 0.97 5 26 0.075 8.1 7.8 0.2 2 23 214 235 213 235 0.96 6 26 8.5e-05 0.0091 17.1 2.0 1 23 259 281 259 281 0.97 7 26 1.8e-06 0.0002 22.3 1.0 1 23 287 309 287 309 0.98 8 26 1.7e-05 0.0018 19.3 0.6 1 23 315 338 315 338 0.97 9 26 0.027 2.9 9.2 1.6 1 23 347 370 347 370 0.97 10 26 0.00027 0.029 15.5 4.8 1 23 442 464 442 464 0.98 11 26 0.0058 0.62 11.3 0.2 1 23 470 492 470 492 0.98 12 26 7.9e-05 0.0085 17.2 3.1 2 23 499 520 498 520 0.97 13 26 0.0019 0.21 12.8 1.1 1 23 528 550 528 550 0.98 14 26 0.00021 0.022 15.9 4.1 1 23 595 617 595 617 0.97 15 26 0.00028 0.03 15.5 1.1 1 23 623 645 623 645 0.97 16 26 1.8e-06 0.00019 22.4 2.0 1 23 651 673 651 673 0.99 17 26 0.00072 0.077 14.2 0.6 1 23 679 702 679 702 0.96 18 26 0.28 30 6.0 1.3 2 19 918 935 917 938 0.92 19 26 0.2 22 6.5 2.5 1 23 959 981 959 981 0.97 20 26 8.6e-07 9.2e-05 23.4 2.2 3 23 991 1011 990 1011 0.98 21 26 1.6e-05 0.0017 19.4 0.9 3 23 1019 1039 1017 1039 0.98 22 26 2.1e-05 0.0023 19.0 1.8 1 23 1047 1069 1047 1069 0.99 23 26 0.1 11 7.4 2.3 1 23 1075 1098 1075 1098 0.95 24 26 0.0001 0.011 16.9 2.2 1 23 1225 1247 1225 1247 0.98 25 26 0.00037 0.04 15.1 0.5 1 23 1253 1275 1253 1276 0.95 26 26 0.00098 0.1 13.8 0.7 1 21 1282 1302 1282 1303 0.96
Sequence Information
- Coding Sequence
- atGTTGTCTACATTACAAGGACCTTCCCAAACTATGGAAGAAATATCGCCGTTCTTTACAATCCCTTTGGATTCGTTGAGCTCACAGAACGTGCTACAAGatatagttattaaaaatgtatcggaCGATAGCATTGCCATTAATAACAATCAGAAAGAAAACactactattatatttttggacGATTTGGAATTACTGCCTGCACCGATTGCCGAATCGAAAGAAGAACCAAAACCCAGCGCTAATAAAAGAAAGCTCAAAATCGAGGCAAGCACGAATATATCGAAATACAAATGCTTCAAATGCTTTGAGCAGTTCTACTCGCTGAATATGTATCGCCAGCATATGACATGGCATCGAAATATAAAGAAGTACAAGTGCTTGAATTGTTCAGCTGGTTATAATAATGAGAACAATTTCAAAATCCATATGGCGATGCATATGCAAGGGAAACCAAAGTGCCCGATTTGCGAGGCGAGTTTCCAAAGACTGGCCAGTTTAAAATCGCATTTAATGATGCATCAGGAGGAGGAACTTTTTAATTGTGACGATTGCAAGGCGGAATTCGACAAAGAagaTGATTTAATCAAACACATGGAAATTCACATGACGAACAAAGCGAAAGAAAATCAGCCACTAACTTGCCCATATTGTAAAATTGATTATGAAGATACTATTAGCTATAAGGAACATATCTCTTATCACATTAAAGTTAagaaattattactaaaaggCAAACGTGCTAAAAAATTGCGACCAATCACTGGGAGTGGATTTGCTTGTACGAAATGTAAAAAAACGTTTACCAAAATGTCATTATTAGACCGACATGAGCGAATTCATAGCGGAGAAAAACCTTACGTGTGCCAATATTGCAATCGCGGCTTCACTCAAAAAGGCACCTTGCAAATCCATTTACGTAACCACACCGGCCTTAAACCATTTAAATGTACGTTGTGTCCAGCGAAATTCAATCAAAAAGGCAATTTGCGTGTACATATTGAAAAAACCCACACTGCCCCAAGTACAGGACAAGTCTACAAATGCTCAGCTTGTAATTGTATCTTTAAAAAGGTCGCTTCTTTGAACGGCCATATGACGAAAGTGCATAACGACACTAGTGAGATAAATTCCGTCatacaaaaattgaaacagCTGGATCAGTTCAGTAAAGTGCCCGAAACTGCTGTTGAAAATATTGATCCTGGGATAATAATGAAACCACATAATAGCGAAAGCTATATTCGATTGACCGAATCATGGCATGATGGCTCAATTCGAAGGTATTCGGTTAAGCGGAAGATTGTCGGGGATGTTCGCTGGTATTGTTGCCAGTTTTGCTCAAAGGAATGCAAAAAGCCTTCGGATTTAATTCGGCACATTCGGATTCATACGAAAGAAAAACCGTTTGAGtGCACTTTATGTAATGCTAGTTTTGCATTGAAGGCAACTATGTTGGGCCATATAAAAACGCATTCGAAACAATCGCTTTTAAAGTGCAATAAATGCGATCAAGGATTTTATTCGAAACGTTCACTATTAAAACATCAaaaaaaacataCAGCGGTTTTCAACCCTCAATACCAATGCTCTCTATGCAGAAAAgttttcaacaattttgatGCAGCAAATCAACACCGAAAGGAACATTCCGATCAGAATACTGACGATTGTATTAAATTGGTTTTAAAGCAGCCGTTATTCCAAACGCAAAATGGGCCTTCACAAACGAAAGCGCCGAAGCAAAAAGTTACAAATACAGAATTGCAAAGTCAGCGCCCACATCATTGCACGATCTGCAACGGCAGATTTACAAGGCTAGTCAATTTGCAACGGCATTTAAAAGTGCATGAGAATGATAGGAGTTTTAAATGCACTTTGTGTCCTAAAGCGTTCGTTTCTGGATACAAATTAAAAGAGCATTTAAAGTTCCATAGCAATGTACGCGAATTCAAATGCGAATTATGTAACAAACAATTTGTAACTTCCTATTTATTGAAAAGGCATTTATTGACGCACAACGATTCCAGGCCGTATAACTGTCAATATTGTGATAAGAATTTTAAAACTGCGATTTTAGCGAGGATGCATATACTTAAGTTGCATAAAAAGAAAGTCAGCCTACAGgcGTTGGAAATGTATCATAAGAATGGCGACGAAAATGTTAAGTGTGTTGAATCCAAAAGTGATAATCCGCCACCGGATACGATaccgaatttaattattggtaCAGAAATTGCAGAGGAAATCGCTGAGGAACCAGAAGTTGAAGTACCATCAGTACAAGAGAACCAGCCAcaagtttttgaaattccaaacaCAATTCTTTCGAACGATCTAATAACAACTGATGGTCAAGAATTGTCGGAAGATTTCAGTCAAATCTATCAAACCGTTTATGTAAATTGTGAGAATTTAGAAGATCCGAACTTCtcaactaatattttatcgCAATTAGAGGGATCGTCGgaagaattattaaacaatacgCAGAATACAGTTGTATTCAACATAGATTCGATCGATATGCAAAATACCGAAATTAATCagattttgaaacaaaacgCTAATTTTCCTAATCAggaaaatattgatattgttgTGCATAACTTGAACATGAATCCTACCATCAATTTCAATGcaaatgaagaaaataaagTGTACTATTACGAGTACGATACAACGACCAgcgaattaaaaaattcgttTCTCGTTACGGAAGATAACAAAATCGCTGAAACTCTTGATATTACTTGTACCGTGTGTGATAATAAATTCGATCAAATGACTAACTTCAAAGATCACAATTGTGTGGCTCTAGCTCCAGTCGAAAAAGTAAAGGAAAAAGAGGAAAAGGCGAAAAGTAAGCCGGAATTTCAGTGCAACATTTGCAAGAGAAAAATGAATTCTCGAATAAGTTACTATAAGCATGTGAGTTCACATGATCGATCGAAACTGAATCCGAATGCTTGTTGCATTTGTCAGAAGGTGTTCAAAAAACCTTCAGATTTgACGAGGCATATAAGAACGCACACTGGCGAGAAACCATTCGGTTGCGAAAAATGCGacaaaaaatttgcattaaaatcgACCCTTGCCTCCCACATGCGATCGCACGACCCCGAAAATTCCAAGAAATTTAAATGTGAAATTTGCAACTCCTTGTTTTCCTTCAAATCTAGTTTAACCACTCACATGCGCATCCATTCAGgaaaaaaaCCGTACAACTGCAACTTTTGCTCAGCAACCTTTCGAACACCAGCACATAAAAGCTTGCATGAAAGTACAAACCACATTTTGAAAACCAAAAAGAAgagcaaagaaaaaattacaactttactcGAATCGGTAGCGTCTGAAGTTGTTGCTAATGTGGAAGAAGGAATGAAGAACAATGCGGTTTTAATGAACCAAAGCGAACAAATGCTAGGACAAGATTCTCTGAACATGCTAAACATCACAGTTCCCGACAACATTTCGGATCAAATCCAAATCGATCCCGTTATCCTGTTGCAAGAACTCCAATCATCTGGCGTTTTAATCCAGGACGGGATTGGTGATAACGATATGATTTCCACCTCGATTTTACAGCTAGATGATTTAACGCTGTTGAATTTGAAGAATATCGGGATTGAAGAAAACGAGAAGCCGTCACCGGAGAAAACCAGAAATTTTGAATGCGATGAATGCCACAAAATGTATGCGTCGAAGGATGTGTTACGAAAACATAAAAAGATTCATAATCGAGTGAAGCAGTTCCCGTGTACGAAGTGTAGTAAAGGTTTTGATAATGAGGATGAGTGGAATGTACATGTTTTAACGCATCATAATGGGTTGAGGCCGTTTACTTGTGCATTTTGTTCGAATTCGTTTGCAAGGGAGAATAATCTTAGGACTCATATGAAaagTCCTTTGGTCGAACGTGGGGACGTCGGTCGTCTAATCACTAGACCAGTAGCAGCAGCAGGACTCATTTCCTGGATAACTCTTGGACATATAGTGGTGCAAAGTCCTGACCGAGCTGATGGCCAGTCCGTTCGCCTCGTTTCCAGTATAATGTCATGA
- Protein Sequence
- MLSTLQGPSQTMEEISPFFTIPLDSLSSQNVLQDIVIKNVSDDSIAINNNQKENTTIIFLDDLELLPAPIAESKEEPKPSANKRKLKIEASTNISKYKCFKCFEQFYSLNMYRQHMTWHRNIKKYKCLNCSAGYNNENNFKIHMAMHMQGKPKCPICEASFQRLASLKSHLMMHQEEELFNCDDCKAEFDKEDDLIKHMEIHMTNKAKENQPLTCPYCKIDYEDTISYKEHISYHIKVKKLLLKGKRAKKLRPITGSGFACTKCKKTFTKMSLLDRHERIHSGEKPYVCQYCNRGFTQKGTLQIHLRNHTGLKPFKCTLCPAKFNQKGNLRVHIEKTHTAPSTGQVYKCSACNCIFKKVASLNGHMTKVHNDTSEINSVIQKLKQLDQFSKVPETAVENIDPGIIMKPHNSESYIRLTESWHDGSIRRYSVKRKIVGDVRWYCCQFCSKECKKPSDLIRHIRIHTKEKPFECTLCNASFALKATMLGHIKTHSKQSLLKCNKCDQGFYSKRSLLKHQKKHTAVFNPQYQCSLCRKVFNNFDAANQHRKEHSDQNTDDCIKLVLKQPLFQTQNGPSQTKAPKQKVTNTELQSQRPHHCTICNGRFTRLVNLQRHLKVHENDRSFKCTLCPKAFVSGYKLKEHLKFHSNVREFKCELCNKQFVTSYLLKRHLLTHNDSRPYNCQYCDKNFKTAILARMHILKLHKKKVSLQALEMYHKNGDENVKCVESKSDNPPPDTIPNLIIGTEIAEEIAEEPEVEVPSVQENQPQVFEIPNTILSNDLITTDGQELSEDFSQIYQTVYVNCENLEDPNFSTNILSQLEGSSEELLNNTQNTVVFNIDSIDMQNTEINQILKQNANFPNQENIDIVVHNLNMNPTINFNANEENKVYYYEYDTTTSELKNSFLVTEDNKIAETLDITCTVCDNKFDQMTNFKDHNCVALAPVEKVKEKEEKAKSKPEFQCNICKRKMNSRISYYKHVSSHDRSKLNPNACCICQKVFKKPSDLTRHIRTHTGEKPFGCEKCDKKFALKSTLASHMRSHDPENSKKFKCEICNSLFSFKSSLTTHMRIHSGKKPYNCNFCSATFRTPAHKSLHESTNHILKTKKKSKEKITTLLESVASEVVANVEEGMKNNAVLMNQSEQMLGQDSLNMLNITVPDNISDQIQIDPVILLQELQSSGVLIQDGIGDNDMISTSILQLDDLTLLNLKNIGIEENEKPSPEKTRNFECDECHKMYASKDVLRKHKKIHNRVKQFPCTKCSKGFDNEDEWNVHVLTHHNGLRPFTCAFCSNSFARENNLRTHMKSPLVERGDVGRLITRPVAAAGLISWITLGHIVVQSPDRADGQSVRLVSSIMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -