Cacu002228.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- -
- Assembly
- GCA_963556235.1
- Location
- CAUVYR010000207.1:724212-725240[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-08 1.3e-05 25.5 0.1 3 43 9 48 7 50 0.94
Sequence Information
- Coding Sequence
- atgccaTCAAGTCGTTTGAGTAGCGATAGTCTTAATGCTGCAGTGCGTATGGTGCATCAAGGTTCGGGCGTGCGACAAGTTGCAAGAATGTTTAATGTGTCTCACAGTGTTATCAGTAGAGCTATAGAACGACACAATCAAACCGGAACAGTAAATTTTCGACACGGAGGAGGTCGTCCACGAGCTACAACACCAGCTCAAACGCGATATTTACAACTGATAGCTCGCCGAAACTGCACCCAGAATGCaacccaaattaataataccCTACGAGCAGCCACTGGAGTGACCATTTCAACACAAACCGTTCGTAGAAGGTTACATGAATATAATCTGCGTGCTCGAAGACGTGCAACATGTCCACAGTTGCAGCGGCATCATAGAGTTGCAAGAAGAGCATGGGCTGCAGAACACGAAGCTTGGCAAGATAACGATTGGAGAAGATGTCTTTTTGCAGACGAATCAAGATTCACATTATATGAATCCGATGGACGTATTTTGTGTTGGCGCAGAAGAGGAGAAAGATATGTTGAAACAAACATGGAAGTTCGGGTTGCTTTTGGTGGTGGTGGTCTTACCGTCTGGGGTGGAATCATGTTCAACGGGCGCACGGACTTACTAATTCCCCGGGGACAAACCATGAATGGTCAGATCTATGCAGAGAGAGTGCTTCTAGACATTGTTATTCCTTTTCGAGATAACTTTGGTCCAGAAATGGTTTTCGTTGACGATAATGCTCGTCCTCACAGAGCAAACATTGTGAACGCTACTCTTCAGCACCATGTTTTACCTCGAATGGTATGGCCTCCAAGATCCCCCGATTGTAATCCGATTGAGCACGTATGGAGTCGCCTTAAGCAACAATTGCTGAATCGTAATCCACCTCCTGCAACATTAAATGACTTGGAAGAAGCACTTTTTGAAGAATGGGAGTTAATTCCTCAAGAATTCATTAACAACGTAATCCACAGCATGCCTGAAAGATGCAATGCGGTTCGTCTTGCTCGAGGAGGCCCAACCAGATACTAA
- Protein Sequence
- MPSSRLSSDSLNAAVRMVHQGSGVRQVARMFNVSHSVISRAIERHNQTGTVNFRHGGGRPRATTPAQTRYLQLIARRNCTQNATQINNTLRAATGVTISTQTVRRRLHEYNLRARRRATCPQLQRHHRVARRAWAAEHEAWQDNDWRRCLFADESRFTLYESDGRILCWRRRGERYVETNMEVRVAFGGGGLTVWGGIMFNGRTDLLIPRGQTMNGQIYAERVLLDIVIPFRDNFGPEMVFVDDNARPHRANIVNATLQHHVLPRMVWPPRSPDCNPIEHVWSRLKQQLLNRNPPPATLNDLEEALFEEWELIPQEFINNVIHSMPERCNAVRLARGGPTRY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00395186; iTF_00395187; iTF_00395188; iTF_00395189; iTF_00395221; iTF_00395222; iTF_00395223; iTF_00395224; iTF_00395225;
- 90% Identity
- iTF_00395186; iTF_00395187; iTF_00395188; iTF_00395189; iTF_00395221; iTF_00395222; iTF_00395223; iTF_00395224; iTF_00395225;
- 80% Identity
- iTF_00395225;