Cacu026070.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- -
- Assembly
- GCA_963556235.1
- Location
- OY744572.1:2799313-2804736[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.54 6.7e+02 0.8 0.0 5 16 156 167 153 169 0.86 2 2 3.2e-12 3.9e-09 36.8 0.0 1 37 347 382 347 388 0.93
Sequence Information
- Coding Sequence
- ATGGACGTTCGGCTACCAGAAAAAATGAGCTTTGACGGAAATGTCGCGCAGAATTATAAGcaattttgccaaaatttCGATTTGTATCTACTAGCTACAGAAAAGGAAGCTTGTAGTAGCAAGATTAAAGTCGCCTTAATGCTCAATATTATTGGTGAGGATGGTGTAAAAGTATACAACACATTACAGCTATCAGATGAAGAAAAGTTTGACTATGCGAGGGTTAGAGAAGAATTCGAAAGATATGTCACACCGAGAAAAAATGAAGTGTATGAGAGGTTTGTGTTTTACAATAGGAAACAGGAAGACGGTGAGACGTTCGATCACTTTCTAACTGACCTGAAAAAACTGGGGCAAAGCTGCGAATTTGGAACACAATTGGAGTCTATGCTGAGAGACCGTATTGTATTAGGGGTCAATGACACAAGAGTGCAAGAAAAAATGCTGAATTGTGGCGAACTTACTTTTCACAAGGCTGTAGAAATGTGCAGGAATAAGGAAGTGGCAAACATGCAGGTAAAAGAGGTCCAAAACAACTTTAAAATTGACTCGATAAGAAAGACCGGAGCAGTCAAGAAAAATGTGGCAGAAAACGGCAATTGTACGCGGTGCCTATTTCGTCATGAAATGGGTAAGTGTCCGGCATTCGGAAAAACATGCTTCAAATGCCAAAAGCCAAATCACTACGCATCAGCTTGCAAACCTATTAGAAGAGAGAGGAATGAAAGGAAGATAGAAGTAGTCAAAAAGGGAGAAGACAGCGACAGTGAAGTGGAAATATATCAAGTTGTTGATATAAGTGAAGTCAAGTCCAGCAAGTGGTgtgaaatgataaaaattgGTGATGAGCAAATTCAAGTGAAAATTGATACTGGTGCGGAAGTGAATATAATGCCATATGAGATGTATAAAAAGTTCTTCAAAAATGAGCCAATGATCAAAGCGTCGACAGTGTTGGTGGCCTACGGTgggtcaaaaattaaaccgGAAGGGAAAATGCCTAAAGTGCAAGAAGGAGCCAAATATGAGAAAAAATACactgaagaaaatattttgtctGCGTTAACAGCTATTGAAAATGGAATGTCTCAAAGAAAAGCTTCGAAAACATTTGGTGTACCGCGGCAAACTTTACAATTTAGAAAAAGCGATAATTTTAGGCAAAAGACTAATTTAGGTCCAAATCCTATACTTACAAAAGAAGAAGAACTTATTTTAGAAGATTGGATACTGACAGGTTACAAAAAAGGGTTCCCCATTAGAAAACTTGATATACAAGCATCAGTGAAAGAATTTTTAGACGCAAATCCTCGTGAGAATCCGTTTCATGATAATTTACCCGGAGATGGATGGTACAGAGCTTTTCTTAAACGTCACGCTGTTCTTACTCATCGAACACCAGAAGCAGTAACAGGAGCTAGCTTTGCTATTTCTGAATCTGACATTCGGAAATGGTTTGGTTTGGTGGAAGATTATCTACAAGGAAAAGAGGAGCAAGAAATGTTTATGAGGTAG
- Protein Sequence
- MDVRLPEKMSFDGNVAQNYKQFCQNFDLYLLATEKEACSSKIKVALMLNIIGEDGVKVYNTLQLSDEEKFDYARVREEFERYVTPRKNEVYERFVFYNRKQEDGETFDHFLTDLKKLGQSCEFGTQLESMLRDRIVLGVNDTRVQEKMLNCGELTFHKAVEMCRNKEVANMQVKEVQNNFKIDSIRKTGAVKKNVAENGNCTRCLFRHEMGKCPAFGKTCFKCQKPNHYASACKPIRRERNERKIEVVKKGEDSDSEVEIYQVVDISEVKSSKWCEMIKIGDEQIQVKIDTGAEVNIMPYEMYKKFFKNEPMIKASTVLVAYGGSKIKPEGKMPKVQEGAKYEKKYTEENILSALTAIENGMSQRKASKTFGVPRQTLQFRKSDNFRQKTNLGPNPILTKEEELILEDWILTGYKKGFPIRKLDIQASVKEFLDANPRENPFHDNLPGDGWYRAFLKRHAVLTHRTPEAVTGASFAISESDIRKWFGLVEDYLQGKEEQEMFMR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -