Cacu013559.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- bab2
- Assembly
- GCA_963556235.1
- Location
- OY744562.1:6174166-6177542[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5 9.2e+03 -2.8 0.0 31 38 384 392 382 393 0.84 2 2 9.7e-16 1.2e-12 48.0 0.0 2 42 399 440 398 443 0.95
Sequence Information
- Coding Sequence
- ATGACAATGCAACAATACTGTTTACGATGGAACAACCATCAACCCAACTTTATTTCTGTGTTCTCTAGTCTTTTAACCAGTGAATCGTTGGTGGATGTCACCCTCGCCGCAGAAGGCAGACATTTACAAGCTCACAAAGTCGTTCTCTCTGCTTGCAGTTCGTATTTTCAGTCTCTGTTTACTGTGAATCCCTGCCAACATCCGATTGTTATTCTCAAAGACGTCCAGTTCGCGGATTTGAAAGTGATGGTCGATTTCATGTATTACGGCGAAGTTAATGTGTCTCATGATCAATTACCGTATATTCTTAAGACCGCGGAGATGTTGAAGATTAAGGGACTGGCGGAAATTCCAGTTGATCAATCAGTCACCAAACACAATAATTCAGTCGATCGCGCTGAATTATTAACACCCGGTGAATCAAATTGGAGCTCCGATGGTGTTGTGGCTAGACAAACAATAACATCATCGCCCTGTCCACTTTCACCGTCGAGTCGAAGAAAGCGATTAAGAAAGTCATCAACGGGATCAGGTTCGGGTTCGACAGAACGTCCACCAGACGAACAGCAATCGACAGGCAGTGAGTTATTATTAACATCTGTAGGTAATGTGGTTCAAACGGTCATAAAATCGGACCCAGGTAGTTTTACTTCAGATGGAAGCAGCGGTACGACACATAAAATGAAACAGCACAGTAGTAGTGATTCGGAAATTCTTCGAGGCAGTTCTCATGAGAGCGTCGAAGAAGAAACTACTCATCAAATTACTTTGcaAGTTCCGCAACATGAAATGAGTTCGAGTATATCGCATAATATTGAATCGAGTTCAATGGAAATTCCTGGACCCTCATCTACCCCttcacaacaacaacaacaacaatcatcacaacaacaacaacagcagcaacagcaacaacagcCTCCGATAACagGCATACAATGGAACGTAATGGAACCGCCTGGCTATGTTGCGCATTATTCGCCAGCAACATGCTCGCCACCGATGCCAAGCAATCATAACAACAGCTCGAATTCAAATATACCCCAATGCATGATCGAACAATCCTCTAATCCACCTCAACCCATCTCGAAACCAACATCTCCGCACAATATGAACAATTGCTACCAGCAGATGGCGCATTCGCCGCCGCAAACTTTGCAAATTAAACGCAAACGCAGCGTGAATCCGCAAGGCGACGAGAATTTCGGGCGCGCTTTGGAAGCGGTGCGATTTGGCGGGATTGGGTTTTGTAAGGCGGCTCGCATGTATGGCGTTAACAATCGAACGCTTTGGCTCGAGTACAAGAAACGCGGTTATCCGAATTTTCGCTTGAGCATTAAGAATCGCAAGCCGGAAGGTTCGACGGGTATGAGTACGCCGAGTGCGACTCCACCTCCGCCGCCGATTCACGAACATGAGCATCATGCGCCGCCGCCGAATGTTAAGCATGCGGAGCCGGTTCTTTGCACGCCGCCGCctaatcatcatcatcattcaGTCGCGTTGATTAGCAGTTCGTTCTTTGATGGGAAGCATGTGGAGTTGGGGCCGATGTTGCAAAGGCCCAAGTATTTGGACGGGACGATTATTAATACGCAACAAGCAATAAACTTTCAAGGAATCAATTTCGAACATATGTAG
- Protein Sequence
- MTMQQYCLRWNNHQPNFISVFSSLLTSESLVDVTLAAEGRHLQAHKVVLSACSSYFQSLFTVNPCQHPIVILKDVQFADLKVMVDFMYYGEVNVSHDQLPYILKTAEMLKIKGLAEIPVDQSVTKHNNSVDRAELLTPGESNWSSDGVVARQTITSSPCPLSPSSRRKRLRKSSTGSGSGSTERPPDEQQSTGSELLLTSVGNVVQTVIKSDPGSFTSDGSSGTTHKMKQHSSSDSEILRGSSHESVEEETTHQITLQVPQHEMSSSISHNIESSSMEIPGPSSTPSQQQQQQSSQQQQQQQQQQQPPITGIQWNVMEPPGYVAHYSPATCSPPMPSNHNNSSNSNIPQCMIEQSSNPPQPISKPTSPHNMNNCYQQMAHSPPQTLQIKRKRSVNPQGDENFGRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPNFRLSIKNRKPEGSTGMSTPSATPPPPPIHEHEHHAPPPNVKHAEPVLCTPPPNHHHHSVALISSSFFDGKHVELGPMLQRPKYLDGTIINTQQAINFQGINFEHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00395587;
- 90% Identity
- iTF_00395587;
- 80% Identity
- iTF_00395587;