Cacu013697.1
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- bab1
- Assembly
- GCA_963556235.1
- Location
- OY744562.1:6940386-6946477[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 1.5e-08 34.9 0.0 1 39 371 410 371 414 0.90 2 4 1e-12 1.2e-09 38.4 0.1 1 39 425 463 425 466 0.95 3 4 1.3e-18 1.6e-15 57.2 0.0 1 45 480 525 480 525 0.98 4 4 2.3e-17 2.9e-14 53.2 0.0 1 39 532 571 532 575 0.94
Sequence Information
- Coding Sequence
- ATGTCTAGCCAGCATTACTGTCTGCGATGGAACAATTATCAAACAAACATGACTTCCGTTTTCCatcaacttttgcaaaacgAAGCGTTCGTTGATGTAACTCTAGCCTGCAACGACTTATCTTTAAAAGCTCATAAAGTGGTACTGTCCGCTTGTTCGTCATACTTTCAAAAACTGCTATTGGAAAATCCATGCAAACATCCGACCATAATAATGCCACAAGATGTTGGCTACACGGATTTGAAGTTCATTATTGAGTTTGTCTATAAAGGAGAAATCGATGTGTCTCAAACCGAACTGCAATCGCTTTTGCGAACGGCggatcaattaaaaattaaaggtCTCTGCGAATCACCCGACGATAAAGAAAATAGCACGCAATCCGTTGCTCCGAAAATTGGCAGGAAATCGCTGTCGCCCAAGCAGCTGAAATTGCAGGAAAATAACAACCGAAAGTACAAATACAAGCGATTGATccacaacaataataataacaataataatccGGAAGAGAAAGAAGATAAAGCCAAAGAATCGACGgatgaagaagaaaatgaCATGCCAGTAGCTTTGGAAGAACGCAAACGCAAAAGGTTTGAGCCTGAACAGGACAAACCACTCAACATGAGCAGCCATGGCAGCATCCTCTCCGGACAAACAATCTTCTCCCACTTCGGAGTGGACACGGACGAATTCCCTCCCGAACCGCCAGCCCCTTCAGCGATCCCTGTAGGACACATGGACATGTCGGACCATTCGCCCACACGCACCCTTTTCACCAACACCTCCATTCATCGGACCGACTTATCGGACGCCACCACCAAATACAACTTGGAGATCAAGAAGGAGTCCGACATCAAATTCGAGACGTTGCGATCGTTCGATCAAGATTCCATCCTGGAGATGTCGGGCCCCGAACATTCGTTGGATAGTCATGACGATGAACGCGGCTACAATTCCATGATGTCTGCTCAGGATTTTGGACGGGGACTTCCGGGAATCTCCAATCGATTAGATAGCGATGATTTGAGCGGTTTGAAGAACGACCACCAATTCGACAGTCTTCAACATCCGTCATCGCGATCGCATGGCGGTGGCCCGAAAACTTGGACGCAAGACGATATGGATATGGCCTTGGACGCTTTGCGGAACCACAATATGAGTCTGACCAAAGCCTCGGCCACTTATGGTATTCCCTCCACTACACTTTGGCAAAGAGCGCATCGGTTAGGCATCGACACTCCGAAAAAGGAAGGTCCGACTAAATCCTGGACGGAGGAGAATTTGAATAACGCTTTGGAAGCGTTGCGAACTGGTACGATTTCGGCGAATAAGGCGAGTAAAGCGTTTGGTATTCCGAGTAGTACCTTGTACAAAATAGCGAGACGAGAAGGTATAAGACTGGCGGCGCCATTTAATGCGGCACCGACAACATGGACGCCCGAGGATTTGGAGAAGGCGTTGGAATCGATTAGGACGGGGCAGACGTCGGTGCAGAAGGCTTCGACGGAATTTGGTATTCCGACGGGGACGTTGTATGGGCGATGTAAGCGCGAAGGGATTGAGTTGTCGCGGTCGAATCCGACACCGTGGAGTGAGGATGCGATGAATGAAGCGCTAGAAGCTGTGCGaTTGGGACACATGTCAATAAATCAAGCAGCAATTCACTATAATTTGCCTTATTCGTCACTGTATGGTAGGTTTAAACGCGGGATTAAATACGATTCCGACAACATAGAGACGATGAATCAAGATAGTCAATCGCAAATGGACAGTCATTCAATAGGCATGGATTACTCGAATTCCCACCAACAAATTCAGTATCAAAACCAAACGAATAGCTGA
- Protein Sequence
- MSSQHYCLRWNNYQTNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVGYTDLKFIIEFVYKGEIDVSQTELQSLLRTADQLKIKGLCESPDDKENSTQSVAPKIGRKSLSPKQLKLQENNNRKYKYKRLIHNNNNNNNNPEEKEDKAKESTDEEENDMPVALEERKRKRFEPEQDKPLNMSSHGSILSGQTIFSHFGVDTDEFPPEPPAPSAIPVGHMDMSDHSPTRTLFTNTSIHRTDLSDATTKYNLEIKKESDIKFETLRSFDQDSILEMSGPEHSLDSHDDERGYNSMMSAQDFGRGLPGISNRLDSDDLSGLKNDHQFDSLQHPSSRSHGGGPKTWTQDDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNIETMNQDSQSQMDSHSIGMDYSNSHQQIQYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121837;
- 90% Identity
- iTF_00395592;
- 80% Identity
- iTF_00395592;