Basic Information

Gene Symbol
ct
Assembly
GCA_963556235.1
Location
OY744564.1:7014728-7045348[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.3e-28 9.2e-24 84.0 0.0 2 72 384 455 383 460 0.95
2 3 1.8e-32 1.8e-28 99.0 0.0 2 77 766 842 765 844 0.96
3 3 1.8e-30 1.8e-26 92.6 0.0 3 75 976 1049 974 1053 0.95

Sequence Information

Coding Sequence
ATGCAGCCCACGGCGACGGCCTCCATACCGCCCCCCGCGGATATGGACCTTCAGACTATGCAATCTATGGATTGGCTGTTTAAGAAAGAACGAATCTATCTACTAGCACAATTTTGGCAACAgAGAGCCACCTTGGCCGAGAAAGAAGTGACGACGCTGAAGGAGCAATTGACGAGCAATACAACGAACAACTGTGAGAATAAGGACCTCTCGAATCTGGACCGGCACAGTTTCGAGTCGGAGATGGCGACGAAGGAGGAAAAAaTAAATCATCTACTTGAGGAGATTCAGAGGCTGCAAGGATGCCTATCGAAAGTGCAGGACAGTTCAATGTCCCAAATTTCTAGACTAGAAGAACAATTAGACCAAAAACGACAGCATATAGCAAGACTGGAAGTGAAATTAGAAACACAGAAAGATTACGAAGATCTCAAACGTGAATTAACAATCCTCAAGTCCGATTTTGCCAACAATCCCGATGGGAAAACCATTGAATTGCTGCTAGAGAAGAGCAAAACGGAAAATCGTGCAAAAACGCCCATCCTATCAGAGACTGAAGGGGTTGCAAATCATCAGGAAGCACCCCCAACCCAATCTGTTTCACCTCCCAACCACCTTCCGCTTCCCTTCCAAAACGTAGAGCAATTCGGTAGTATCTTAGGCGAAGAAATCGTTGCCAATTGGCGACGCAATCTTGACCAAACACATAGAATAACCCCAAAATCACCCTTGACAGATGCACCGGTAAATTCCACAACCCCCATTGCGGATACCACGACGACGGAAAAAAGCACCGCATCCACACCGCAACCGGTCGATGTTACATCGGGCGGTCAACAATCGCCCGCTGAAAACTCGATGCACAATGGTAACCCGAAGAGTCCGGAAGATAATAACAATCATCATGTTAGCAATAACAACATTCCCATGAGTGCAACCCTGTGTGCGGTCAACAGTTTCCTGCGAAACGACGATCTGAAGAGTCCCTATCGATTCGATGAACACCGTTCGCCTTTCAGGTTTGCCGAAGATTTGGGCATGGCACCCGGTTCGATGGTGTCGCGATTAGGGGAAAGCCTTATCCCAAAGGGTGACCCGATGGAGGCGAAATTGCAGGAAATGCTGCGCTACAATATGGACAAATATGCATCGCAGAATTTGGACACTTTGCACATCGCACGAAGAGTGCGCGAATTGCTTTCGATTCACAATATTGGGCAACGATTGTTTGCGAAATACATTCTTGGATTATCGCAGGGAACCGTTTCGGAGTTGCTGTCGAAACCTAAACCTTGGGACAAATTGACGGAGAAAGGACGAGATAGCTACAGGAAAATGCACGCGTGGGCCTGCGATGAAAATGCCATCATGCTGCTCAAATCACTCATACCAAAGAAAGGCAAAGAAACGGGAATGCCAACGTTCGGCCGTCCTGAAAACGATCTAACCGAGGAACGTATTGCTCACATTTTAAACGAAGCCTCGCAATTCCAACAGCTGAAAAGCCACAGTGCTGAAGACAGTCACAGCAACGATGACTCGAAATCGCCACATGGCTGTTCAAGTCCTTTCTCGAAGGACTCCTCGCTCAACAAGCGTCTCAAGAAGTACGAAAACGACGACATCTCGCAAGAGAAAGTCGTACGCATCTACCAGGAGGAACTGGCCAAACTAATGGGCGGTCGCATGGAGGATTTTCGATCGCGCGATGGTTTCCCAAATATGTTTCTGCCACAATTATTTAGTCGCAACCACATGGAGCGAACgcaagaagaaattcgaaTGGCGCTCGATGCCTACCATCGCGATCTTGCCAAACTAAACCACGGCCAAAATCCCGGACAAATGCCGCCGCTCGGCTTAATAGCTCTTCAGCAACAGGCCTTAGCGCAGTTCCAGCAGCAACATCAAGCTTCAAACGGGGGTGTGCAAGATTTGTCGCTCCCAAAAGAGAAGCTGAAGATGATGAACGGATTGGTGGACGAGAAAGACTGTAAAGATGAAGAGATAATGCGTCATTCCGGCAGTGCTTTCAGTCTGGTTCGGCCCAAGATCGAACCAGGTACCCAACCAAGCACCGGTTCCACTGCTTCAAGTCCTTTGGGGAACTCCATTCTTCCGCCAATGACTCCCACCGACGATTTCGCCGGATCGGCAGCCGCCAGTCCATTGCAAAGAATGGCATCCATCACCAACTCACTGATTTCACAACCGCCAAGTCAACCCCATCACTCCACATCGCAAAGACCTCTAAAAGCCGTCTTGCCACCAATCACCCAACAGCAATTCGACATGTATAACAATCTAAACACCGAAGATATTGTGAAGAAAGTCAAGGAGCAATTGAGTCAGTATTCAATCAGTCAACGATTGTTTGGTGAAAGTGTCTTGGGCTTGTCGCAAGGTTCAGTTAGCGACCTTCTAGCACGACCAAAGCCTTGGCATATGCTCACGCAAAAAGGCCGAGAACCTTTTATTCGTATGAAAATGTTTTTGGAGGATGACAATGCCGTACATAAACTGGTTGCCAGCCAATACAAAATCGCTCCGGAGAAACTTATGCGTACTGGAGGTTACGGAGGTGCTTGCAGCACAGTTATCAGCAAACCGATGCCACCAACATCGAAGATGTTATCCGAAGCAGCAGGTTTGCTCAACAAAATGCAAGAAACTCAGAATCTTCTACCATCCTCATTACAACTCGGACCTCCTGGTCAAAACCCACAGCCACCACCGCCACCGATGCTTCTCACACCTCCTGGCATACCACCACATCACCCAATCAATCTACAAACTCCCGACCATCTAAAGAAATCCAATCCAAGTCCGCATGCTGGAGTACAACATTCGCCCATGTCCCAGCATCATTCTTCTATGCGCAACATGCACATGAGTCCCAGCGTTTACGAGATGGCGGCTCTCACACAGGATTTGGACACGCAAGTCATCACCACAAAAATCAAAGAGGCTCTTTTGGCCAACAATATCGGACAAAagATATTCGGCGAGGCAGTCCTCGGACTATCGCAAGGTTCCGTAAGCGAGCTATTATCAAAACCAAAACCGTGGCACATGCTGAGCATCAAAGGTCGCGAACCGTTCATTCGAATGCAACTCTGGTTGAACGATGCCCACAACATCGACAGATTGCAAGCGTTGAAGAACGAGCGACGGGAAGCGAACAAACGAAGACGTTCTTCTGGACCTGGAGCACACGATAACAGTTCCGATACATCATCGAACGACACCTCCGAATTTTACCATTCGAACTCGCCCGGGCCTGGACCAGGGGCTCCTTCAGCTAAGAAACAAAGAGTACTCTTCTCGGAAGAGCAGAAAGAAGCACTACGTTTGGCGTTCGCACTGGATCCGTATCCAAATCTGCAAACCATCGAATTCTTGGCAGCTGAACTGGGATTGTCAAGTCGTACCATTACGAATTGGTTCCACAACCATCGAATGCGATTGAAACAACAAGTACCACATGGAATGGCTTCGGACATTCCACCAAGAGACCAAAGCGGAAACCAAGCACCTTTTGACCCGGTTCAATTCAGACTGCTTTTAAACCAAAGATTACTAGATATTTCGAAAGAACGGATGGGTCTGTCGGGTGTGCCGCTTCCATATCCACCATACTTAACGCCAAACACCACCAATATTGCTGCGCTTATCAGTCGCGGCTTGATACCAACTGCCGAAATGGATCTACTGAACAATGCAATGAAAGAGCAAATGAGCGGTTTGGATCTTTCGATGACTTCGCTGAAACGCGAGCCAGGAGATTACGACGACGAAGACGATGTTGAGAGTAATGTTGGCTCGGAAGACTCGAACATGTCGGATAGTTTACATGGTGGCGAAGTGAAAGCTGAACCAAAAGAAACACCAATTCAAAACCAAGGTAGGTCGTCGCGAAGAAAACCCGCCGCTCCTCAATGGGTGAATCCAACATGGCAAGAAGACAAGGAAAAAGTGCCGACTGGCGATGAGGTAATTATTAATGGCGTCTGTGTGATGCAAACGGAGGATTATGGTCGGAGAAATGCGGAAGAAACGGTTCGTGTTGAACCGACTGCGGTGATGGACCGTTTCGATGATGATCAAAGTGATAGTTCTTCGGTGAGTCAAGAGGACACTCATGAAGATAAAATAGGCGGCGATGGGGTGAAGTGCGAGGCAGTGGAAGAGATTGGTGATAAAATTATTGAGAATAGTGACAAACAAGTGAAACAAGAGAACGAAGACGAACGATGGGACTATTAA
Protein Sequence
MQPTATASIPPPADMDLQTMQSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLTSNTTNNCENKDLSNLDRHSFESEMATKEEKINHLLEEIQRLQGCLSKVQDSSMSQISRLEEQLDQKRQHIARLEVKLETQKDYEDLKRELTILKSDFANNPDGKTIELLLEKSKTENRAKTPILSETEGVANHQEAPPTQSVSPPNHLPLPFQNVEQFGSILGEEIVANWRRNLDQTHRITPKSPLTDAPVNSTTPIADTTTTEKSTASTPQPVDVTSGGQQSPAENSMHNGNPKSPEDNNNHHVSNNNIPMSATLCAVNSFLRNDDLKSPYRFDEHRSPFRFAEDLGMAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKGKETGMPTFGRPENDLTEERIAHILNEASQFQQLKSHSAEDSHSNDDSKSPHGCSSPFSKDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGGRMEDFRSRDGFPNMFLPQLFSRNHMERTQEEIRMALDAYHRDLAKLNHGQNPGQMPPLGLIALQQQALAQFQQQHQASNGGVQDLSLPKEKLKMMNGLVDEKDCKDEEIMRHSGSAFSLVRPKIEPGTQPSTGSTASSPLGNSILPPMTPTDDFAGSAAASPLQRMASITNSLISQPPSQPHHSTSQRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACSTVISKPMPPTSKMLSEAAGLLNKMQETQNLLPSSLQLGPPGQNPQPPPPPMLLTPPGIPPHHPINLQTPDHLKKSNPSPHAGVQHSPMSQHHSSMRNMHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPGAPSAKKQRVLFSEEQKEALRLAFALDPYPNLQTIEFLAAELGLSSRTITNWFHNHRMRLKQQVPHGMASDIPPRDQSGNQAPFDPVQFRLLLNQRLLDISKERMGLSGVPLPYPPYLTPNTTNIAALISRGLIPTAEMDLLNNAMKEQMSGLDLSMTSLKREPGDYDDEDDVESNVGSEDSNMSDSLHGGEVKAEPKETPIQNQGRSSRRKPAAPQWVNPTWQEDKEKVPTGDEVIINGVCVMQTEDYGRRNAEETVRVEPTAVMDRFDDDQSDSSSVSQEDTHEDKIGGDGVKCEAVEEIGDKIIENSDKQVKQENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01368896;
90% Identity
iTF_00395149;
80% Identity
iTF_00395149;