Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963556235.1
Location
OY744558.1:2587266-2597283[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-23 5.9e-20 72.1 0.0 2 89 116 199 115 199 0.95
2 2 0.0069 29 5.8 0.0 8 68 1222 1281 1220 1318 0.77

Sequence Information

Coding Sequence
ATGACAACAAAGGTAGACAAACCAACATTCAATTATGGCATCAAGAGCCATCCGAGTGGCTCGAAAACGCCGTCGCCCGCAAAGTCGGACAGCAATTATCCGCTGAAAGACGAATGTTTCGAGTTTGAAGTGCCTGCGGACGCTCCCGTCTTCTATCCGACCGAGGAGGAATTCGCGGATCCGTTGGGCTACATCGCCAAAATTCGACCGATCGCAGAACTGACGGGCATCTGCAAGATCAAACCACCTTCCAACTGGCAGCCACCGTTCGCAGTGGACGTAGATAAACTGCGATTTACACCTCGAATACAAAGACTAAACGAACTGGAAGCAAAAACTCGCGTAAAGCTCAATTTCCTTGACCAAATAGCGAAGTTTTGGGAATTGCAAGGTTCTTCGTTGAAGATCCCGATGGTGGAAAAGCGCGCTCTTGATTTATATACATTACATCGGATTGTACAATTCGAGGGCGGGTTCGATTGTGCGACCAGAGACCGCAAATGGTCCAAGATATCAACCCGAATGGGTTATCCGGCTGGCAAAAGCATTGGTACTATACTTAAGACACACTACGAACGCCTTTTATTCCCTTTCGATGTGTTCAAGCAAGGCAAAGCTGTCAGCATTGTAACTAAGATTGAACGGGTTTCGGACGAGATTGAGAAAGCTGACAAGGATTACAAGCCGCACGGCATTGTTAATCGCATGGCAATTAAACCACCACCTGAAAAAAATGCGCGACGTTCGAAACGTTTCGAAATGGATGAGTGTAAGACTGAGCACGTACCTAATAagcttataaaatttgaaacttgCGAGGATGGCGAAGATAGAGATAACAAAGAACTGAGACGGTTGCAATTTTACGGAGCCGGCCCAAAAATGGCCGGTTACAACGAGAAGGGCGAGGCGAAACAACGGAAAAATGTCAATTACGATTTCGATCCCCTTGCCAAATATGTATGTCATAATTGTAATCGTGGTGACGCAGAGGAAAATATGTTGCTTTGCGACGGTTGCGATGACAGTTATCATACATTTTGCTTGATGCCTCCTTTAACTGAAATTCCAAAAGGCGATTGGCGTTGCCCGAAATGTGTTGCCGAAGAGGTTTCCAAGCCGATGGAAGCTTTCGGTTTCGAGCAAGCGCAACGCGAGTATACGTTACAACAATTCGGTGAAATGGCTGATCAGTTCAAGTCTGAATACTTCAATATGCCTGTACATATGGTACCCACTGGAACAGTAGAACGCGAATTTTGGCGCATTGTTTCATCAATTGACGAAGACGTAACGGTCGAATACGGTGCTGACTTACACACAATGGATCACGGATCTGGTTTTCCTACAAAAACTTCCTTAAACTTATTTCCGGGTGATAAAGAGTATGCAGATTCTAGTTGGAACTTGAATAATTTGCCAGTATTAGAAGGTTCGGTCCTTGGCTATATCAATGCTGACATATCCGGAATGAAGGTTCCTTGGATGTACGTGGGAATGTGCTTTGCGACATTCTGTTGGCACAACGAAGACCATTGGAGCTACTCCATAAACTACCTTCATTGGGGCGAAGCAAAAACCTGGTACGGAGTACCAGGTAGTAAAGCGGAGGCTTTTGAGGAAACGATGAAATCAGCGGCACCTGAATTGTTCCATTCGCAGCCAGATTTGCTTCATCAATTAGTTACTATTATGAATCCGAATATTTTGATGAACGCTGGAGTGCCAGTCTATCGCACTGATCAGCATGCCGGTGAATTTGTTATTACGTTTCCAAGAGCATACCATGCTGGCTTCAATCAGGGATACAATTTTGCGGAGGCGGTCAATTTTGCACCGGCCGACTGGCTGCGGATGGGGCGCGAATGTGTTGCCCATTATTCACATCTTAGACGATTTTGTGTTTTTTCGCATGATGAACTAGTTTGTAAGATGGCTTTAGATCCGGAACGGTTAGATCTCACCATTGCAGCCGCTACTTACCAAGATATGATACACATGGTGGATGCGGAGAAGAAGTTGAGGAAGGCGCTTTTAGATTGGGGCGTAACCAATGCAGAACGAGAAGCTTTCGAGCTACTCCCAGACGATGAACGCCAATGTGAAGTCTGTAAAACCACTTGCTTCCTGTCAGCGATGACATGCAGTTGTTCGCGAGATATTCTAGTGTGTTTGCGTCATTACAAAAACCTGTGTGAATGTCCAGCTCCAAATCGCACATTACGCTACCGGTATACCTTGGACGAACTACCCGTAATGTTGAAGTCGCTCAAACTGAAGGCGGAGTCCTTCGACCATTGGGTCAGTAGAGTGAAGGAAGCGCTCGACCCGAAAACACCAAAGACATTGAATCTATCCGAATTGAAAGCATTGCTGTCTGAAGCTGACGGCAAGAAATTTCCAAAGTCCGACCTATTACAGACATTAACCAGTGCAGTGGAAGACGCGGAGAAATGCGCCAGTGTCATCCAACAGTTGGATCTGAACAAGATCCGAACAAGAACACGACATTCATCTGATACAAAGTACAAATTGACCGTGGAAGAGCTGACGTTGTTTTGCGAGGAGATTGATAGTTTGGCTTGTGTTCTGGATGAAGCAAAAAGCATCCGCGATTTGTTGCACCAAACCAAGAAGTTTGAAGAAGAAAGCATACGATTGCTAAATATGCCTTTGCAGGATTGCCCTTTAGCTGATTTGAAGGTGTGTCAGTCGCATGGCAGTGGACTCTGCATTGAGCTACCAAACTTGAAACAAATCGGTACGAGGGAAAAACAAGTGGAATGGTTCCGCGATGTTCTCCTGTACAAAAAGAAAACGGATTTTATGGGTTTGGATTCGGTGAAGAATCTAATCCAACAAGGTATACAATTACCACCACACCCGACAATGGAGGAAGAACTGAGCAACTTGCAGTTGATTCTGGTGAACAGCGAGCAATGGGAAGAAAAAGCGGCAGCTGTCTTGGAATCGGAGGAGAACAACGTCCTAGTCCAAGTCGACAAGCTTCTAAAGGAAGCTTCGAAGATCACTTGCTATTTGCCCACGGAGAGTCATCTTTACGATTCGATGCGTAAAGCTCGCGATTGGTTGAGACTTCTGGAAGAGATGAATTCAGCTGAGTATTACCCCTACTATAACGCAATGGAAGATTTGATTAAAAGAGGACGCGCTCTTGCACTGCATTTGGTGGAGGTGGATAAAATGAATGACTATCTCTCACTGGCGTCCAATTGGAAGGACAAAACATGCCGCGCTTTTCTTAAGAAGAACAGCGCGTGTACTTTAATGGATGCACTGTCACCTCGCATCGTACCACCAACCATACaaaaatcgaagaaaaaagTACAGGACGATGAAAGCATTTTCTTATCGAATACAATGGATCCAGCTGCAGTGGTCGCGGTTTTCAAAGATGCCGAAGACACTGAGATGGACATGATTAGGAAGCTGCGCGTTGTAAATACGGAGAAGGGACTTGATCCGGCGGACGGTGCGAGTTTCTGCGTATGCGGACGCAGTTTATTTGGCGTGATGATGCAATGCGAGCTTTGTAAAGACTGGTTCCACTCAACTTGCGTCCAACTACCGAAAATTTCGACGACAAGGTATAAGGGCACTTTTACAAGTGTCGCATTGCATCTTGGTTTTAAggattgtaaatatttgtgcTCATTTTGCCAACGAACTAAGCGGCCAAGGCTCGACGTTATTCTCGGTTTGTTGATGTCGTTACAGAAGCTCTATGTTCGTGTGCCTGAGGGGGAGGCGTTGCAATGTCTGACGGAACGTGCCATGAACTGGCAGGATCGTGCTAGGCAGTTGTTGCAGAATCCGGAATTGGAAGCGGCGAAGAACAAGCTGATTGCGTTCAGTCTGAAGTACACCGAAGCGGCGGCCAGACAACGGACGGAGAAGATCATTTCGACGGAGTTGAAGCGTGCGTATAAGAACCCAGAGTTGCATCAACGAGTGCAGGAAATCGCACCGTTTAGTGGCGTGAACGACGATGGAGTAAGTAGTACGGAGACTAATTTCATACAGGATTCCGATGATTCGAAGGATGGAGCTGATGATCGCATGGGAGAGCATGCGTATTCGTTGCATATACCGAAAGTGGAGACTGATGAGTATATTTTAAAGATTGCACCAGAGATGCGCAAGCAGATCGAGGAGCTGTTGATGGAAGGGGACCTGTTGGAGGTGTATTTAGACGAGACATTTTTATTGTGGAAGATTATTCAAGCATCACGAGACCCGGAGAAAGAGTTTATTCTAATTGATTTTGATGCGCAGTTGAAATGCACACCAAAGAAACGTGGCCGCAAACGACTATCCGAGGAATTGCAATCAGACATGATGATTCGGAAATCGGTGAAGGCGATCAAGATGGAAGGCGAGAAGAAGATCCGAAGTCGGAAAGGTGCCGCCAGTATAAAGGAAGGCGGACAAAAGAAGCAAGGTAAACGAAGAGGACGACGTCGCCAGTCGATCGGATCCGACGACGAGGAAGACGTGGATGAGACTTGTGCAACTAGTGGTTGCTTAAAACCGTCTGGTCAAAATGTCGATTGGGTACAATGTGATGGTGGTTGTGAACAGTGGTTTCATATGGCCTGTGTCGGTTTGTCTGCTGGAGATATAAACGAGGATGAAGATTACATTTGCATGACGTGTACAAAGAATACCACTTTTGGTAGTTTGCAAACCGATAGTCGATCGAGTAGTCCGGCATCGCCCGATTCCACTGAGCCTTCCACTTCAAAAGACTCTACATAG
Protein Sequence
MTTKVDKPTFNYGIKSHPSGSKTPSPAKSDSNYPLKDECFEFEVPADAPVFYPTEEEFADPLGYIAKIRPIAELTGICKIKPPSNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRIVQFEGGFDCATRDRKWSKISTRMGYPAGKSIGTILKTHYERLLFPFDVFKQGKAVSIVTKIERVSDEIEKADKDYKPHGIVNRMAIKPPPEKNARRSKRFEMDECKTEHVPNKLIKFETCEDGEDRDNKELRRLQFYGAGPKMAGYNEKGEAKQRKNVNYDFDPLAKYVCHNCNRGDAEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLFPGDKEYADSSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVAHYSHLRRFCVFSHDELVCKMALDPERLDLTIAAATYQDMIHMVDAEKKLRKALLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCSCSRDILVCLRHYKNLCECPAPNRTLRYRYTLDELPVMLKSLKLKAESFDHWVSRVKEALDPKTPKTLNLSELKALLSEADGKKFPKSDLLQTLTSAVEDAEKCASVIQQLDLNKIRTRTRHSSDTKYKLTVEELTLFCEEIDSLACVLDEAKSIRDLLHQTKKFEEESIRLLNMPLQDCPLADLKVCQSHGSGLCIELPNLKQIGTREKQVEWFRDVLLYKKKTDFMGLDSVKNLIQQGIQLPPHPTMEEELSNLQLILVNSEQWEEKAAAVLESEENNVLVQVDKLLKEASKITCYLPTESHLYDSMRKARDWLRLLEEMNSAEYYPYYNAMEDLIKRGRALALHLVEVDKMNDYLSLASNWKDKTCRAFLKKNSACTLMDALSPRIVPPTIQKSKKKVQDDESIFLSNTMDPAAVVAVFKDAEDTEMDMIRKLRVVNTEKGLDPADGASFCVCGRSLFGVMMQCELCKDWFHSTCVQLPKISTTRYKGTFTSVALHLGFKDCKYLCSFCQRTKRPRLDVILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQNPELEAAKNKLIAFSLKYTEAAARQRTEKIISTELKRAYKNPELHQRVQEIAPFSGVNDDGVSSTETNFIQDSDDSKDGADDRMGEHAYSLHIPKVETDEYILKIAPEMRKQIEELLMEGDLLEVYLDETFLLWKIIQASRDPEKEFILIDFDAQLKCTPKKRGRKRLSEELQSDMMIRKSVKAIKMEGEKKIRSRKGAASIKEGGQKKQGKRRGRRRQSIGSDDEEDVDETCATSGCLKPSGQNVDWVQCDGGCEQWFHMACVGLSAGDINEDEDYICMTCTKNTTFGSLQTDSRSSSPASPDSTEPSTSKDST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-