Cmon012192.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000042.1:4756668-4762946[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.7 4.8e+02 3.2 0.0 3 23 283 304 282 304 0.90 2 16 2.6 7e+02 2.7 4.0 1 23 366 389 366 389 0.92 3 16 0.079 22 7.5 0.1 2 21 396 415 395 416 0.93 4 16 0.00046 0.12 14.5 4.6 1 23 514 537 514 537 0.96 5 16 0.0077 2.1 10.6 1.7 2 23 544 566 543 566 0.94 6 16 0.00039 0.11 14.7 2.4 1 21 663 683 663 684 0.95 7 16 0.015 4.1 9.7 0.9 2 23 696 718 695 718 0.91 8 16 2.3 6.2e+02 2.8 2.2 1 23 721 744 721 744 0.95 9 16 0.02 5.6 9.3 0.2 3 23 751 771 749 771 0.95 10 16 0.018 4.9 9.5 0.4 1 23 775 798 775 798 0.97 11 16 0.74 2e+02 4.4 0.7 2 23 805 827 804 827 0.93 12 16 0.093 25 7.2 0.9 2 23 836 858 835 858 0.94 13 16 0.62 1.7e+02 4.6 0.1 3 22 865 884 864 886 0.88 14 16 4.6 1.3e+03 1.9 2.6 3 23 1020 1041 1019 1041 0.95 15 16 0.26 70 5.8 0.2 2 23 1048 1070 1047 1070 0.95 16 16 0.18 49 6.3 0.9 1 23 1083 1105 1083 1105 0.96
Sequence Information
- Coding Sequence
- ATGGAGACAAAATTATGCAGAATTTGTGGAAAACTTGGTACAACTCATCAAGATATATTCAAAATAGAGGGtttaaaacacaaaatagaaACCTGTCTTCCAATTCTTGTGACCCAGCATTGCCTCCTTCCAGATACAATATGTCAAGAATGTTTGGAAAACGTATCACAGTTCTActtattcataaaaaattgtcTACAAAGTATAATTGTATTAGAATCCCAATACGATGTGACAGAATCCTGTTTAAAATCAAAAAGAAGGCAAGAGAAAAGCTGTATGGTTAATTTTACGACCACTATGAAAACTCAAGATACTCAAACCGAAGATAAATATGATATTATATTCACGAAATACAAAGAAAATTTAGATAAAACTAAGTTACCATTTGAAGGTTGTGATATAAATTTAGTTGATTATGAGGTTGAATCCGAAACTTCGGAGGCTGAAAACAGTGCACAAAATCAAGGTGTCGTGGTTGTGCAAAAGGAGAAATTTCAACGACGAGTGGATAATTTTCTAGACAATCTTCTTGCTACAAAAACTGTATTTGCGAAGTCAtactttgatgattttgaaaataagttgATCAGTGAAATAGTACAAAGAAAGGGTGTGAAAAGAAGTGTTAGTAGTGGTATCGAAAATCTTCCTATGAAAATCTGTAAGATTGATAGTGGTGGGAATAGGAGGAAATGTAGATCACCGAAAAAGGTTGAAAATATAACTGAAATGACAGCGATAGTGGATATTAAAGAAGAGAATGAAATTGATAATGAACAGGAAACTGATTTGGAAATTGTCGAACAGAATGGAAATACCTTGGAAATGACCTTTCCTCAGATATGTCTCTTATGTCAAGGAGAATTTTCTGGTCCTGCAGCTTTAGCTGCTCATATTTTTGAAGTACACGACTTGGATTTCAATCAAATACTGGAAAGTTCTTgtgagaagaagaaaaagataccgaacttgttgaaaatttctgatatcAAAAGAAGTAATAGTTTTGATGAAAACCAGCAATGTGACTCAAAATCGCCTCAAACTCAACTGCCTCCCCTCGGTGCTCAAAATCATCAGACATTATTGGAGCATTCCTGTCAGAGCTGCCCCTTCTCTTCGTCCACCAAGCAGGAACTGCTGGAGCACTGTCGATCAGAGCACTCCATGGAACTTCCTCTCATGTGCGGCATTTGTTTTCAACCAACGACCTCTTTGATCAATCTCAAAAACCACCTGAAGATATGCGTAATCGAATATCCTGTAACTACCAGATATTTTTGCTCCATCTGCAAGTACGGTGAAGACGGTGTCAGGGGAATGGAAAATCATGTGTTGGTACACGATTTTCTGCTCGATATGTGCAAGAAGGAGATGAGGATGTTCGATCCGGCTGATTACATTGAATTGAATCCTTCTTGTGAATCTGGTCCGCTTTCGCCCGCTTCGAAGAGTTTAGCGTGCAACCTCTGCCTCCAGTCCAACTTCCAGTCGTTCAAGGAATTCAGCGATCATCGACGTAAGCAGCACAGTAAGTTTCACTGCGATCTGTGCAACAAGTTCTACGGCCGAAATTCTCACCTGTGGAAACACGTGAATCGTCTGCACAAGAACCATCCGAGCATAACCTGTCAGATCTGTTATAAAACTAGCGCGTCCAAGTACCACCTAGCTCAACACTTTTCCAAAATTCACGCCGCCAAGCAGAAGGTCCCAATGAATGTGACGAGCGTTCCCAACGACGCTGAATCCAGAAGCCAACATTTCGTGTTCAGGAAATTCCAGAACTTCGATTTTCAAGAGAAGAAAAGTACGTCGTCGGAATTCGACGATATCTCTAACAACGCCGCGTCGGATTTGGAGATATCGGATGAGGTTTTCGTCCCTGATGATAAGATGTCTGTACCGAAAGAGGTTGACGCTTCTAGCGATTTATATACGAATATAATTACTAATTATACTCCCCCGCCTAACAAAGGTGAATTCAAATGTCCCAAGTGTTCCAAAGGGTTCTCCAAGAAGCTGTTGTTGAAGAAGCACAAGAAAAATTGCAGACCGAAACTGCAGAAAGATCTTTTGACGAGATGCAAATCGTGCGCTAGGATCTTCAAAGATCGACAGAGCCTCGCTAAGCACCTGGTGAACTATCATTCTGAGTACACGTGCGAGATTTGCTTACAGAAAACTCAGAGCAAATGCGAGATCGTGTCCCATATAAGATTCACCCATCCAAATTGCTCACTTTTCTGCAACGTTTGCGGCAATATCCTGCGTTCCAAGCAGAACCTAGCCGACCACGTGAAAGATCATTCGAATTCGTACGTCTGTCAGTTCTGCGGCGATTCCCTGACTTCTAAAATCAAACTGAAGATGCATATCTTGAGTCTACACCGAAAAATATTGAGCTTGAGTTGCGGAATATGCTTGAAGCTCTTCGAAAACCAGCATATTTTAAGAAACCACGTACAGCTCTCGCACAAAAATGAGTTGAGACCTTTCACTTCTTGCACGGTTTGCGGGAAGAACTATGGTTCTAAATGGAAGACGTACGATCATTTAAATAAGAGTCATGGACGTATCTTTAAGGCTTGCAAGACTTGCTTGGAGATATTTGATACGGAGGAGGAGCTCAATTTGCATTCTGAAGAGATGCACTCGGTGAAGAATCAGGTGAACATGAAGAATACTCAGTTTAACTATTTGAAACAAGACTCTGAAGATGTTGATGATTCTGAGACTGGTAAAGATGAAGTGGAGGACTTGGAGGATAACGATAAGGGTACAGAAGAGATCTTTAACAACTTCGCGACGGAAATGTCAGGATTTTCGAAGATATCGTTGTTGGAAAAGAGATTATTGGGGAAGAAGGTAACAAATGATGAGGTTCCAGTTAAAATTTGCAAAGTGGAAGATAAACCTAAGTCGAATGTGGTTAAAACTAAAGTTACCGCTTCAAAGAAAACTTTGGATTCCTCGAAATTCGAAGATGATATGTCTACCCAACAAGGAAGTTCGAAAAGAACTGTTTACGTCAACAGTGATGTGCCATCTTTGtgtgaaatttgtttcaaaacCTGGCCGGCCAAGAAGCATTTGTGGCAACATTATATACGTTGCCATAAAAGTGTCGCTGCCACCGTCTGTGGGATATGTTTGAAAACAAACGTAGATTACAGGGCGCTTCAACAACATCTAAGATCTAATCATCCCACCCTTTTACACGGTCAAGGTTTCGGTTCTAATTTCATCTGCAGGATTTGCGGTAGATACCACAACGCCAGCTCGAAACTGAAGCTACACATGGCGATACACGAAAATTTCGATTGGAGCATTTTAGAGACCAAGAATGACGTACCGGTCAACGGGGAACCCCCCGAAATCAGAAAAGGATTCGAAGAAAACGAACGTTACTTCGAGAGTCTCATAGAGCAGGTCGAATGTTCGTCGAACGACGAGGAGGAGAGCGATTACGGATCGAAGAACAACGAAGAGAAAAACGAAGAAGATAACTCGAGTACGTCTGAAATCGCCGATGAGGAATCGGACAGTGATTCCTCGGGTGATTCTACTCAGAACGACGAGACGCAGACGTTCCAGAACAGCGATTCCGTAGTTCGAAACGCAGACAATCGAACGTTTAAAACTAGTTCTAGCActgattgttcctctccgagaaacGAGGATTGCGGGGCGAAAACCCGCGTTTTTTCAGGCGGGGTTATAGAGTTTCAAAGTTCTGAGAGCGAGGATTCGAGTTCGGAGAGTTGTAGTAGCGAAGACGAGGCTATTCGAGAGAACGAAAGATCGAATTCGACATGTTCGAACGAGCCTTTGTTGGTAAATGGTATCACGAATTCGAATAGTAACGGGCTGTTGGGGAATGCACTTAGTGATTCACTTCCGTTTGCCGATAATGGTTTGTTCCGTTTCAAGACGGAAGAGTTGGATTCTGCGGTGAAGAGTATAAGTCTGGAGTGTGAAGAGGAGATAAAGGAGAACTTGGAGATTGAATACTGTGAGTTACCGATGAATGCTTCGTTGAACGAAAGAGAAATTGAGTCTGCGGTTGGAAGTATCTTGTAA
- Protein Sequence
- METKLCRICGKLGTTHQDIFKIEGLKHKIETCLPILVTQHCLLPDTICQECLENVSQFYLFIKNCLQSIIVLESQYDVTESCLKSKRRQEKSCMVNFTTTMKTQDTQTEDKYDIIFTKYKENLDKTKLPFEGCDINLVDYEVESETSEAENSAQNQGVVVVQKEKFQRRVDNFLDNLLATKTVFAKSYFDDFENKLISEIVQRKGVKRSVSSGIENLPMKICKIDSGGNRRKCRSPKKVENITEMTAIVDIKEENEIDNEQETDLEIVEQNGNTLEMTFPQICLLCQGEFSGPAALAAHIFEVHDLDFNQILESSCEKKKKIPNLLKISDIKRSNSFDENQQCDSKSPQTQLPPLGAQNHQTLLEHSCQSCPFSSSTKQELLEHCRSEHSMELPLMCGICFQPTTSLINLKNHLKICVIEYPVTTRYFCSICKYGEDGVRGMENHVLVHDFLLDMCKKEMRMFDPADYIELNPSCESGPLSPASKSLACNLCLQSNFQSFKEFSDHRRKQHSKFHCDLCNKFYGRNSHLWKHVNRLHKNHPSITCQICYKTSASKYHLAQHFSKIHAAKQKVPMNVTSVPNDAESRSQHFVFRKFQNFDFQEKKSTSSEFDDISNNAASDLEISDEVFVPDDKMSVPKEVDASSDLYTNIITNYTPPPNKGEFKCPKCSKGFSKKLLLKKHKKNCRPKLQKDLLTRCKSCARIFKDRQSLAKHLVNYHSEYTCEICLQKTQSKCEIVSHIRFTHPNCSLFCNVCGNILRSKQNLADHVKDHSNSYVCQFCGDSLTSKIKLKMHILSLHRKILSLSCGICLKLFENQHILRNHVQLSHKNELRPFTSCTVCGKNYGSKWKTYDHLNKSHGRIFKACKTCLEIFDTEEELNLHSEEMHSVKNQVNMKNTQFNYLKQDSEDVDDSETGKDEVEDLEDNDKGTEEIFNNFATEMSGFSKISLLEKRLLGKKVTNDEVPVKICKVEDKPKSNVVKTKVTASKKTLDSSKFEDDMSTQQGSSKRTVYVNSDVPSLCEICFKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNVDYRALQQHLRSNHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWSILETKNDVPVNGEPPEIRKGFEENERYFESLIEQVECSSNDEEESDYGSKNNEEKNEEDNSSTSEIADEESDSDSSGDSTQNDETQTFQNSDSVVRNADNRTFKTSSSTDCSSPRNEDCGAKTRVFSGGVIEFQSSESEDSSSESCSSEDEAIRENERSNSTCSNEPLLVNGITNSNSNGLLGNALSDSLPFADNGLFRFKTEELDSAVKSISLECEEEIKENLEIEYCELPMNASLNEREIESAVGSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -