Basic Information

Insect: Cryptolaemus montrouzieri
Gene Symbol: -
Assembly: GCA_013387265.2
Location: JABFTP020000021.1:68026214-68034087[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.097 26 7.2 0.0 2 23 223 245 222 245 0.92

2 9 0.016 4.3 9.7 4.6 1 23 251 273 251 273 0.99

3 9 0.019 5.1 9.4 1.1 1 23 279 301 279 301 0.97

4 9 0.012 3.3 10.0 6.2 1 23 307 329 307 329 0.98

5 9 9.9e-06 0.0027 19.7 3.4 1 23 335 357 335 357 0.99

6 9 0.076 21 7.5 3.6 2 23 364 385 363 385 0.97

7 9 0.0065 1.8 10.9 4.2 1 23 390 414 390 414 0.98

8 9 2.2e-05 0.006 18.6 1.6 1 23 420 442 420 442 0.97

9 9 0.0032 0.87 11.8 4.5 1 23 448 470 448 471 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.097	26	7.2	0.0	2	23	223	245	222	245	0.92
2	9	0.016	4.3	9.7	4.6	1	23	251	273	251	273	0.99
3	9	0.019	5.1	9.4	1.1	1	23	279	301	279	301	0.97
4	9	0.012	3.3	10.0	6.2	1	23	307	329	307	329	0.98
5	9	9.9e-06	0.0027	19.7	3.4	1	23	335	357	335	357	0.99
6	9	0.076	21	7.5	3.6	2	23	364	385	363	385	0.97
7	9	0.0065	1.8	10.9	4.2	1	23	390	414	390	414	0.98
8	9	2.2e-05	0.006	18.6	1.6	1	23	420	442	420	442	0.97
9	9	0.0032	0.87	11.8	4.5	1	23	448	470	448	471	0.95

Sequence Information

Coding Sequence: ATGCCTGATCCGGTAATCGAACCCAAACCATCTGCGGAGTTAATCTCCGCAGATGGTGTTGACTTACCCACAGAGGCAACTAAATGGGCTGAAAGACTTTTTGAAAATAAGTGCTTTATATTATCTACTTCAAAGGCTCTAACTATTCTATCACAATGGATTTTAGTAGATGTGGAGAAAAGGGAGAAGGAATTTGATAAACTTATCAGATGTTTTCCCACGCATATTTTAGAACCTGTGGAAGTTTTCAAACACTTGGATACATGTATTTTGTATAACAAAAGTGATCTTTGTACATTTCGATTTTTAGATTATTTATTCCAAAATAACTGGAtgctttcaaattttaaaaccaGATATGATGCTCTTCATCTTAGGTTTGGACAgacACCacctgaaaaattaaatgaacagGAACTGAAAACAGATAAAATAACAGTACAAGAAAAAAATGATCTTTCTCCTCAAAATCAAACAAGTCCTGTAAAAGTGAGggttaaaatgaaaaacagaaagcagcttattttgaaaaaattaatggttTTTGGATTGAGGCCCAGTTTGCGAATGGCAGCTCTGAAAATGTTGAGTtgcaagaaaaataaatacactCTAAAGGAATTAGAAGATGAAGCAGAAGaaaatccGGAAGAAAAGATTGGTATCAAATGTCCAATTTGTTCAGCTACAATAAATGATAGTTTACTTCTTGAGCAACACTTGGCTCTTAGTCATTCTAAGGATGTCACTTACAAATGTGGAATTTGTTCATTTGTGTGCCAATATCATGGAGATTATttgaatcatatgaaaacaCATTTCAATGGACCACCATTTAAGTGTGACTACTgtGAAAATACAACAGACCAAATATCTAAACTAATATCACACCGATCCCAACATCTTgaagaatcaatatttcaatgtaCATTCTGCTCTTTTAAATGTcgtcaaaagcaaaattttgcctcgcatttgaaaattcattctccAGAAAAAAACTACAAGTGTGATAATTGTACCAAGACCTTTCGTTTCAAGCAAAGTCTAGACACCCATATGTTGACACACTCTAATGAGAAGAGCTTAACATGTGACAGCTGCGGCTTTCACACAAAATTTTTAAGTCACATGATAGCTCACAAGAGAATCCATGCaggTGATATTTATCGGTGTTCCTACCTTCATTGTAAATATTCCACTTCCAAAAAAAATCAACTGGCTAGCCATGTCAAAAGTCACAATGGGGTGAGACCACATTCTTGTGGAATTTGTGGGCGCGGCTTCATGGAGAAATCTCATTTGGTTCGCCATGAGCGTATTCACTTAGAAGAAAAACCTTTCAAATGCTCCAACTGCGACTACGCAAGTTCTAGAAGAGataaattgaaagaacattTTACAAGGCACCATGGCGAAAACGCATCAGCAAAAGTACCCTATAAGGCACGTCCTATGAGGAATAATAATACAGCAAATTCCGTAAGGCCCAAATCACAGACGAATTCTGAATCTCCTGCTTCCACAAATTCCAATGGTATCAGTTTTACACAAACAGCCAACACAACTTCTTCCAGCGGATCCCAgcctttgaataatgaaatacaggatcTAATAATGCATCATCAGGCGCATCCTCCTTCAGCTTCAACAGGGAACAATCTTTCAACTTTAAATTCCAATTATCACCATTTCGCGGATCCCGCCGATTTTCATCATCATAATCACACACATAACTTACACAATCAGATTCTGAATACCAGTCACAATCAGCGTGGAGGTCAACACAACAATAATATTGTCAATCATCACATGCTGGCAAGGACTAACCATTCGACAGCTACATCTACGGCGGCAGCTGTTGCTGCTGCTATGATGCTAGATCCACGTTTTCATCATAACTCTTCAGTGCCCTACCATCCTTCCAGTACTCCAGTTTCGATGGCGATGGCGGCAGTCCAATCTTCTCAACAAATTCAAGCTTCTGGCCAACATACTGAATACCCACCCTCCTTACAGAATTGTATGACTTTATTCTAG
Protein Sequence: MPDPVIEPKPSAELISADGVDLPTEATKWAERLFENKCFILSTSKALTILSQWILVDVEKREKEFDKLIRCFPTHILEPVEVFKHLDTCILYNKSDLCTFRFLDYLFQNNWMLSNFKTRYDALHLRFGQTPPEKLNEQELKTDKITVQEKNDLSPQNQTSPVKVRVKMKNRKQLILKKLMVFGLRPSLRMAALKMLSCKKNKYTLKELEDEAEENPEEKIGIKCPICSATINDSLLLEQHLALSHSKDVTYKCGICSFVCQYHGDYLNHMKTHFNGPPFKCDYCENTTDQISKLISHRSQHLEESIFQCTFCSFKCRQKQNFASHLKIHSPEKNYKCDNCTKTFRFKQSLDTHMLTHSNEKSLTCDSCGFHTKFLSHMIAHKRIHAGDIYRCSYLHCKYSTSKKNQLASHVKSHNGVRPHSCGICGRGFMEKSHLVRHERIHLEEKPFKCSNCDYASSRRDKLKEHFTRHHGENASAKVPYKARPMRNNNTANSVRPKSQTNSESPASTNSNGISFTQTANTTSSSGSQPLNNEIQDLIMHHQAHPPSASTGNNLSTLNSNYHHFADPADFHHHNHTHNLHNQILNTSHNQRGGQHNNNIVNHHMLARTNHSTATSTAAAVAAAMMLDPRFHHNSSVPYHPSSTPVSMAMAAVQSSQQIQASGQHTEYPPSLQNCMTLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -