Basic Information

Insect: Cryptolaemus montrouzieri
Gene Symbol: -
Assembly: GCA_013387265.2
Location: JABFTP020000165.1:55089903-55094189[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.4e-05 0.018 17.2 1.1 1 23 127 150 127 150 0.96

2 14 3.1 8.5e+02 2.4 0.3 2 23 157 179 156 179 0.88

3 14 0.00024 0.065 15.4 5.2 1 23 185 208 185 208 0.98

4 14 0.00065 0.18 14.0 3.1 2 23 214 236 213 236 0.95

5 14 0.0028 0.76 12.0 2.3 1 23 242 265 242 265 0.96

6 14 0.29 78 5.7 0.1 3 23 272 293 271 293 0.94

7 14 0.3 81 5.6 0.6 1 23 299 322 299 322 0.95

8 14 0.051 14 8.1 2.6 1 23 328 351 328 351 0.92

9 14 0.11 30 7.0 2.8 1 23 357 380 357 380 0.96

10 14 0.00023 0.062 15.5 2.0 1 23 386 409 386 409 0.98

11 14 9.4e-05 0.026 16.7 0.3 1 23 415 438 415 438 0.94

12 14 2.6e-05 0.007 18.4 0.6 1 23 444 467 444 467 0.97

13 14 0.031 8.5 8.7 2.1 2 23 474 496 473 496 0.91

14 14 0.00091 0.25 13.6 4.1 2 23 503 525 502 525 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.4e-05	0.018	17.2	1.1	1	23	127	150	127	150	0.96
2	14	3.1	8.5e+02	2.4	0.3	2	23	157	179	156	179	0.88
3	14	0.00024	0.065	15.4	5.2	1	23	185	208	185	208	0.98
4	14	0.00065	0.18	14.0	3.1	2	23	214	236	213	236	0.95
5	14	0.0028	0.76	12.0	2.3	1	23	242	265	242	265	0.96
6	14	0.29	78	5.7	0.1	3	23	272	293	271	293	0.94
7	14	0.3	81	5.6	0.6	1	23	299	322	299	322	0.95
8	14	0.051	14	8.1	2.6	1	23	328	351	328	351	0.92
9	14	0.11	30	7.0	2.8	1	23	357	380	357	380	0.96
10	14	0.00023	0.062	15.5	2.0	1	23	386	409	386	409	0.98
11	14	9.4e-05	0.026	16.7	0.3	1	23	415	438	415	438	0.94
12	14	2.6e-05	0.007	18.4	0.6	1	23	444	467	444	467	0.97
13	14	0.031	8.5	8.7	2.1	2	23	474	496	473	496	0.91
14	14	0.00091	0.25	13.6	4.1	2	23	503	525	502	525	0.94

Sequence Information

Coding Sequence: ATGGATACCCAGGAGATCCAAGTAGATTCCTCTAGTTCTGAAGATAATGAGGACAGATTGGACGACTATTATTATGATGATTACAACAGTGCAGAAAGAAGTGATAAGACTGAAATGGAGTATGATGATGATTCTGTTAAAACTGAAGATGTTAAAGCTAATACCagcgaaaatattgaaatgcaaGATGATAAATCAATGATAGAGCAGTTTATTGATGATGAAGGAAAAATCTGGgatagaaataaatttttagaaGAATGCAAACCTGATATTGCTATGGTTAAACCATCAGATGTTGAAGTTGAAAAGATAACAGACGATGGGACAAGAAAACCTCGAATCGTCAAAGGATATAAAGTGCAAAAGGGCAAAGTATACGAGTGCCATATTTGCGGTACTGCAATGAGCACTAAAAGCATGATGAAACGTCATCTACAAAATATCCATTCAGTGGTGTTAGAAGTTAGTTGTCAATTCTGCGATTTCGTTGCACTCAAGAGGGATAAACTCGAAGAACACATTAAACAAATGCATATGGAATCAGGGCATTATAAGTGCCACTTGTGTGAATTCTCCACAACAACATCACATACACTAAAAGTCCACATAAAAAGAGTCCATTTCAATATGTCTCAAAAGTGTCAATTTTGTGACTACACATCTATCCATTCGTCTCACTTGAAGCAACATATCGACGTagttcatttcaaattgaagaaacatAAATGTCATTTATGCAATTATTCGGCTTCCTTGAAGGGTACCTTGAACCAACACATCAAAGCCGTGCATTTTAAATTGAAGAATCTTTGCGATTTATGCGATTTCACTTCGCCGTCGCGAGAAACCATGATAAATCACGTAAACGCCGTTCATTTGGATATCGTGAAGTACAAGTGCGATAACTGCGAATTTGGTACGAATTTTAACTGGGTGTTCCGGCAACACGTCAATAGCGTccatttgaaattgaagaacttCAAGTGCGATCTGTGCGACTATCGCGCGAGCAGAAACTGTCATATTAAACAGCACGTAGAAGGTGTTCATCTAAACGTTAGAAAGTTTAAGTGTGATTTTTGTGATCATAGAGCATCTCAGAAGAGTTCCATCACTTTTCACATGAATTCAGTTCATCGGCGACTCAAACAATTCAAGTGTGAACATTGTGATTTCGACTCGACTAGCAGAACTTCTCTCAAAATTCACATTAACAGCAtccacttgaaattgaagaaatatcaaTGCCATATTTGCGATTTCAGCGCCACTCAGGGAAGTAATTTACGTTCTCATATAGCAGCCATTCATCTAAACGAGAAAAAGTACAAGTGCGATTTCTGCGAATACAGTTCAGCCCAAAAATCCAATCTTAACTCACACATAGATAGGgttcatataaaaaataaaaatttgaagtgCCACCTCTGTGAGTACACTACGGTTCAGAAGATTTGCTTGAGGCAGCATGTGGAAGGcgttcatttgaaaataaaaaaccagAAATGTCATTTATGTGACTATAAGACATATCAACGTGGTCATCTTAAGAGACATATAGGGAGGGTACATCCAGAATTATTAATAAGAACGTGTATGTAA
Protein Sequence: MDTQEIQVDSSSSEDNEDRLDDYYYDDYNSAERSDKTEMEYDDDSVKTEDVKANTSENIEMQDDKSMIEQFIDDEGKIWDRNKFLEECKPDIAMVKPSDVEVEKITDDGTRKPRIVKGYKVQKGKVYECHICGTAMSTKSMMKRHLQNIHSVVLEVSCQFCDFVALKRDKLEEHIKQMHMESGHYKCHLCEFSTTTSHTLKVHIKRVHFNMSQKCQFCDYTSIHSSHLKQHIDVVHFKLKKHKCHLCNYSASLKGTLNQHIKAVHFKLKNLCDLCDFTSPSRETMINHVNAVHLDIVKYKCDNCEFGTNFNWVFRQHVNSVHLKLKNFKCDLCDYRASRNCHIKQHVEGVHLNVRKFKCDFCDHRASQKSSITFHMNSVHRRLKQFKCEHCDFDSTSRTSLKIHINSIHLKLKKYQCHICDFSATQGSNLRSHIAAIHLNEKKYKCDFCEYSSAQKSNLNSHIDRVHIKNKNLKCHLCEYTTVQKICLRQHVEGVHLKIKNQKCHLCDYKTYQRGHLKRHIGRVHPELLIRTCM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -