Basic Information

Insect: Cryptolaemus montrouzieri
Gene Symbol: Clamp
Assembly: GCA_013387265.2
Location: JABFTP020000042.1:15685480-15696781[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.1e-06 0.00057 21.9 3.4 1 23 99 121 99 121 0.99

2 8 8.2e-06 0.0022 20.0 0.8 1 23 159 182 159 182 0.93

3 8 6.5e-05 0.018 17.2 3.0 1 23 318 340 318 340 0.97

4 8 3.8e-06 0.001 21.0 0.2 1 23 346 368 346 368 0.98

5 8 1.1e-06 0.0003 22.7 1.5 1 23 374 396 374 396 0.99

6 8 4.3e-07 0.00012 24.0 1.2 1 23 402 424 402 424 0.98

7 8 1.1e-05 0.003 19.6 3.3 1 23 430 452 430 452 0.98

8 8 3.5e-05 0.0094 18.0 0.3 1 23 458 480 458 480 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.1e-06	0.00057	21.9	3.4	1	23	99	121	99	121	0.99
2	8	8.2e-06	0.0022	20.0	0.8	1	23	159	182	159	182	0.93
3	8	6.5e-05	0.018	17.2	3.0	1	23	318	340	318	340	0.97
4	8	3.8e-06	0.001	21.0	0.2	1	23	346	368	346	368	0.98
5	8	1.1e-06	0.0003	22.7	1.5	1	23	374	396	374	396	0.99
6	8	4.3e-07	0.00012	24.0	1.2	1	23	402	424	402	424	0.98
7	8	1.1e-05	0.003	19.6	3.3	1	23	430	452	430	452	0.98
8	8	3.5e-05	0.0094	18.0	0.3	1	23	458	480	458	480	0.98

Sequence Information

Coding Sequence: ATGTTCGACCCTAATGCTATCACAACTCAACAATCTACTATCCAATATCAACAGCAGCAACCACAGCAGACAGAAAaggataaaaatcaagaaaatgccCAAAAAGAAACATTTCCTTCTTTCTGTTATGCAAATGTAAACATGATCCACAAAATTACACCCAACACTACACAGCCTCAACATTCAACCGTAAATATGTCACAATTATCAGATGATAAGTGCTACATCACGCAGCCATTTAGTTATAATTACGCTCTGGTCAACCAGATGTCACTAACACAGAATACAATTACATTCAAGTGTGAGATTTGTGGATTGATGTTTGCACATTTGTCACTTCTAAATCATCACAAAAGGACTCATCAGCAAGGAGATCAAGGTCAAATTCAACAACCACAACAGATTACCCTCCAAGTCCAACCCCAGCAGCAACAAGCAACGcaaattcaaattgtttcgGCCGAACGGATACGGTTTTCTTGCGAAGAATGTGGAATGACGTTCAATACTCAAACGGACCTAAAATCACACAAAATTCAGTCCCACTCTGCCACTCAGCAGGTTGTCACCACGCAGGCTCAGACTCAGCAAAATACGTTGAAAATAAAGAACTGCGAAAGCTGCGGGGCTCCATTACCGCAggacaataataaaaaacgagcGGTGATGAAGGTGAAGTGCGAGACTTGTTTGTCAGCCGAAGCTATACAGCCGCAGATTTTCGTCGTTGCTGCCGCACCTGATTCGACGGGGGTTAAATTCGAGGAGTCCACGGGGACGCAGACAACTACGAATTTAGGAACTCAAAACTCAATTCCAATCGGTGTGAAGAACAACCATCCAGTCAAGAGAAGAGGTTTTGCCAGTGCTATGAAGTGTACTAAATGTAACGGCAGCGGAATCATCTTCATAGGGGGATCCAAAAATCAACAGAATAACGTCGACAAACCCTTCCACTGTAATATATGTAATGGTTCATTCAGTAGGTACTCATCGTTATGGTCACATAAAAGACTGCATACAggagagaaaaattttaaatgtaatATCTGTGGTCTGGCCTTCGCCAAAGCTGCTTATTTAAAGAATCATTCTCGAATTCACACAGGGGAAAAACCGTATAGGTGCAATGTTTGTGGTATGCAGTTTTCTCAGTCTCCCCACTTGAAAAATCACGAACGGATCCATTCCGGGGAACGCCCGTACGTGTGTGAGGTGTGCGAGAAATCCTTCGCGCGGCATTCTACCCTCTGGAATCACCGAAGAATACATACGGGGGAGAAACCGTACAGATGCGATATTTGCGGCTCGTGTTTCAACCAGGCCACCCATTTGAAGAATCACGCCAAAGTTCATTCGGGCGAGAAACCTTTCAAGTGTGACATTTGTGCCGTTGGATTTTCAGACAGATTTGCACTTAAACGACATAGAAATATACACGAAAAATATGGCCGAACCAAACCTCAAGTAACCACGTCATCGACGGAAGAAACGCAAACCGTAAACACCACCACGGATTCGAATACATCGATGGCTTCGACGGGTCAAGATTCGCAAGAGATCGAGGCGAAATTCGAAGCCAAGTACGAGCAAGAAGAGCACGTCGAGCTGTCAGAAGAAATGACGGACATTTCGGAACTTCAAGTGCAACTAGCGTAA
Protein Sequence: MFDPNAITTQQSTIQYQQQQPQQTEKDKNQENAQKETFPSFCYANVNMIHKITPNTTQPQHSTVNMSQLSDDKCYITQPFSYNYALVNQMSLTQNTITFKCEICGLMFAHLSLLNHHKRTHQQGDQGQIQQPQQITLQVQPQQQQATQIQIVSAERIRFSCEECGMTFNTQTDLKSHKIQSHSATQQVVTTQAQTQQNTLKIKNCESCGAPLPQDNNKKRAVMKVKCETCLSAEAIQPQIFVVAAAPDSTGVKFEESTGTQTTTNLGTQNSIPIGVKNNHPVKRRGFASAMKCTKCNGSGIIFIGGSKNQQNNVDKPFHCNICNGSFSRYSSLWSHKRLHTGEKNFKCNICGLAFAKAAYLKNHSRIHTGEKPYRCNVCGMQFSQSPHLKNHERIHSGERPYVCEVCEKSFARHSTLWNHRRIHTGEKPYRCDICGSCFNQATHLKNHAKVHSGEKPFKCDICAVGFSDRFALKRHRNIHEKYGRTKPQVTTSSTEETQTVNTTTDSNTSMASTGQDSQEIEAKFEAKYEQEEHVELSEEMTDISELQVQLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01310805;
90% Identity: iTF_00764986;
80% Identity: -