Cmon041860.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- ZNF526
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000165.1:21947108-21948136[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00065 0.18 14.0 1.1 2 19 84 101 83 104 0.93 2 9 0.00012 0.034 16.3 0.2 1 23 111 134 111 134 0.93 3 9 1.5e-06 0.0004 22.3 0.4 2 23 142 164 141 164 0.97 4 9 5e-07 0.00014 23.8 0.7 1 23 169 192 169 192 0.97 5 9 0.016 4.5 9.6 5.5 1 23 201 224 201 224 0.96 6 9 1e-06 0.00027 22.9 0.4 1 23 231 253 231 253 0.98 7 9 1.5e-06 0.00041 22.3 2.8 1 23 259 281 259 281 0.97 8 9 2.1e-05 0.0056 18.7 3.0 1 21 287 307 287 310 0.95 9 9 5.5e-05 0.015 17.4 1.8 1 23 316 338 316 338 0.97
Sequence Information
- Coding Sequence
- ATGGTCAGAGCCAAAGTGaggaaaaaaaatgttaaaaacagAATAGGACTGAAAGtcagaagaagaaaacagcaagCGAGCAATATTGATACTATTCAATGTAAGGAGGAAAATCAAGAATATCACGAAAATTCAGAAGCTGTTAGAAACGAAAGAGAAACATGTAGCGGCGATTTTAAAAAGAGGATGTTATCAAATTATTCGGCACCCAAGAAAAAACGTTATAGAAAAGACGATCCTAGAAAAATTCCTTGTAAAGTTTGTAATAGACGTTTTACGTTTAATTATCTTCTAAAAATCCATTTTCATAACGATATCGATATGAGTGAATACATATGTAGTCTTTGTGGGGaaatttattcgtctgaagatgATTTGAAAACACACAAAACTAATATTCATGCCGAGGAAGCCGCAAGGCTTCAGTGCGATGAATGTGGTAAACAGTACACATACGAAGGCGATCTTAGTAGGCATATAAAGACGAAACATGAGGGTTTCATCTACAAGTGCGAGGTTTGTGAGAAATCCTTCAATAACAATCAAAGTCTAAAAGAACATATTTTGGTGAAACATGACGAATCTTATGTGAAACCCAAATATCCCTGTACTTTCTGTGATAAACATTTTTCTTGTAAGAAAACGTTGATGCTACACGTCAAAAATATCCATTATGGGTTGAGGCATTTTTACATCTGCGATATGTGCGGGAAGAGTCTGGCAACGCCGAATTCTTTCAGGAATCATTTGAGGACACATACGAATGACAAACCGTTTCCTTGTACTGTTTGTGGGAAGAGATTTGGAAGAAACCATCATCTGCAAGATCATTTAGTTACTCACACAAAAGAGAAACCGCACAGTTGTACGAAGTGTGGTAAAGCATTCACGCAGAGGGCTCCACTGTTGCGACATATGAAATGTGTTCATGAAACTGCAAGACCTTACCAATGTCTGATTTGTTCCAAATCGTTTGCTACAAAGTCATTGGTGCATACTCACGCAAAGTTACACAATGTCATAAATTAG
- Protein Sequence
- MVRAKVRKKNVKNRIGLKVRRRKQQASNIDTIQCKEENQEYHENSEAVRNERETCSGDFKKRMLSNYSAPKKKRYRKDDPRKIPCKVCNRRFTFNYLLKIHFHNDIDMSEYICSLCGEIYSSEDDLKTHKTNIHAEEAARLQCDECGKQYTYEGDLSRHIKTKHEGFIYKCEVCEKSFNNNQSLKEHILVKHDESYVKPKYPCTFCDKHFSCKKTLMLHVKNIHYGLRHFYICDMCGKSLATPNSFRNHLRTHTNDKPFPCTVCGKRFGRNHHLQDHLVTHTKEKPHSCTKCGKAFTQRAPLLRHMKCVHETARPYQCLICSKSFATKSLVHTHAKLHNVIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -