Cmon012120.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000042.1:3645305-3648164[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.6 1.3e+03 1.9 0.1 2 23 197 219 196 219 0.92 2 13 0.43 1.2e+02 5.1 0.3 2 23 251 271 250 271 0.95 3 13 5.2e-05 0.014 17.5 1.5 1 23 277 299 277 299 0.98 4 13 0.00048 0.13 14.4 0.0 1 23 311 333 311 333 0.96 5 13 0.0062 1.7 10.9 6.7 1 23 336 359 336 359 0.96 6 13 2e-05 0.0053 18.8 4.9 1 23 429 451 429 451 0.99 7 13 2e-06 0.00054 21.9 1.9 1 23 456 478 456 478 0.97 8 13 6.1e-06 0.0017 20.4 0.1 1 23 484 506 484 506 0.96 9 13 2.3e-06 0.00064 21.7 1.5 2 23 512 533 512 533 0.97 10 13 4.5e-08 1.2e-05 27.1 1.6 1 23 539 561 539 561 0.96 11 13 5.5e-05 0.015 17.4 1.1 1 23 567 589 567 589 0.97 12 13 0.015 4.2 9.7 0.6 1 23 595 618 595 618 0.97 13 13 0.001 0.29 13.4 0.3 1 23 632 655 632 655 0.95
Sequence Information
- Coding Sequence
- ATGGAAACTTCACTCAAAGATCTCAAGCGGCTGTGTAGAGCCTGCTTAAGTGATAATAATGAAATGGTAGCTTTGGACACAACTAATGAAGAATCAACAAGCATTATGGATATGTTTACACATATCACAAGTATAAAGttAGAAGAATCGTTGAAAGATTTCTACCCCCCAAATATCTGCATAAAATGTAGTAAAAGCATCatagattcattcaatttcaaaaagacATGCATTGAATCCAACCGAAGCATTGAAGAACGTATTCGACTCATACAGGCTGAACCCCCTACAGTCGAAAAAGAAGAGATCGATATAAAACCTGACGAAAATGAAGATGGGGATGGATCTGATATTAATGATGACATACCTTATGATGTTCAAAATCCAGCAACACCTTCTGGTAGTGACTTTAGTAGTAGTAGCGACTCTGAGTTCGAAGTAGaagtaaaaaaaaagaaaccgAGAAAAATTAGAACACAAAAAGAAGTTAAAGAAAAGAAGAAGGTAAAATCGAAAAAGTTTGATACGAAATCTGTATTGGAAGCTATAGCAGAATTTAGGGAGAATCATAggcataaatacttgaaaacttGTATGTTTTGTCAGCTTGAAACTGTTTCTTATATAGCTTTAGCGACGCATATAGCTAATTTTCACAAgGAATATAAGGGGAAATGGTGCTTTATGTGTAGTCAGGTTGTGGACGATTTAGAAGAAcatagaaaaattcataccgATATGGAAAACGTGGTTTGCAAGTTTTGTTCGAGAACTGCAAAGCCTTCTGGATATGTTAGCCATTTAAAAACACATTTAGCTTCTAAGCCATTCCAATGTTCCTACTGCCAACGTGGTTTCATGCGTATGGACAGCTTGAAAACCCACCTAAAAGCCCATGCGAACGAGAGACCTAACTTGGACGAAAGGCCCCACAAGTGCCCGAATTGTGGTGCAGCCTTCGCCGACCCCACTTTGTTGGGTTGGCACGCTGCCAAGCACGGTTCATTCAAATGCGACACTTGCTCAAAAAGGTTCAAGTATAAGAAGAGACTGAAAGACCATGAATGTGTAAAGCACGAAGAAGACGGTGAAGGACCACATCTGAATAAGCAGGAAACGATAGAAAACGAAATGGACATGCTGCATGATTTCGAAGACTACTTAATTCCAACCGATGAAAAGGTATCTCTACCGAATTTCTGTCATCCGTGTAATAGAAAAGTCAAAGATCTCCTGATTCACACGCAACTTTACCATTCGAGCACTTCGGATAATCCCAACGAATTCCAGTGCTTCGTATGTAAGAAAACTTACGATACGAAATCTAAGTTAAGAAATCACTTTAGAACCCACGAAGAGAAATTGTATAATTGTAaacagtgcaataaaaagttcaaatcTCCCTCGCAACTGAGATTACACGAACAAATTCACACCACAGACCGGCCTTTTATATGTAACGTTTGTGGAAAAGCTTTCGGTAGAGGGAGCACACTAAAAACTCATATGATAGGGCACAGCGAAAAGCCTGAAGTGTGTGAACTATGTGGTAAACGATTTTGTAGACCGGCGGAATTGAAATTACACATGACAAAACATGCAGGAATAAAGCCTTACCTATGTCCTGAATGTGGTAAATCGTTCTCCCAGAAGAGTCATTTAACTGAACATGCAAAGAGTCATAGCGAGGAGCGACCCCATCAGTGTCCATACTGTGAGAAAGCATTCAAGTCGAAAAGTATCCTGACTGGTCACGTTAAAATTCATAAAGgAGAAAAGGCATACAAGTGCATGGAATGCGGATACGGAGCATACACTCAATTCAGATTGTCTCAGCATATTCTGAGGCAGCACGAGAAATCTGATGGTACAGTAGACGTGCATGGAAATACGCACGTTTGCGTAATTTGCAAGCTTTCCTTCCCTAAAATATACAAACTGAACGTACACATGGCATCGGCACATAAAGTAGTATTTAAAACCGAGATGAAATAG
- Protein Sequence
- METSLKDLKRLCRACLSDNNEMVALDTTNEESTSIMDMFTHITSIKLEESLKDFYPPNICIKCSKSIIDSFNFKKTCIESNRSIEERIRLIQAEPPTVEKEEIDIKPDENEDGDGSDINDDIPYDVQNPATPSGSDFSSSSDSEFEVEVKKKKPRKIRTQKEVKEKKKVKSKKFDTKSVLEAIAEFRENHRHKYLKTCMFCQLETVSYIALATHIANFHKEYKGKWCFMCSQVVDDLEEHRKIHTDMENVVCKFCSRTAKPSGYVSHLKTHLASKPFQCSYCQRGFMRMDSLKTHLKAHANERPNLDERPHKCPNCGAAFADPTLLGWHAAKHGSFKCDTCSKRFKYKKRLKDHECVKHEEDGEGPHLNKQETIENEMDMLHDFEDYLIPTDEKVSLPNFCHPCNRKVKDLLIHTQLYHSSTSDNPNEFQCFVCKKTYDTKSKLRNHFRTHEEKLYNCKQCNKKFKSPSQLRLHEQIHTTDRPFICNVCGKAFGRGSTLKTHMIGHSEKPEVCELCGKRFCRPAELKLHMTKHAGIKPYLCPECGKSFSQKSHLTEHAKSHSEERPHQCPYCEKAFKSKSILTGHVKIHKGEKAYKCMECGYGAYTQFRLSQHILRQHEKSDGTVDVHGNTHVCVICKLSFPKIYKLNVHMASAHKVVFKTEMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00416991;
- 90% Identity
- -
- 80% Identity
- -